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The map label for this gene is yjaU

Identifier: 16078193

GI number: 16078193

Start: 1205165

End: 1205899

Strand: Direct

Name: yjaU

Synonym: BSU11280

Alternate gene names: 16078193

Gene position: 1205165-1205899 (Clockwise)

Preceding gene: 16078191

Following gene: 255767256

Centisome position: 28.59

GC content: 42.86

Gene sequence:

>735_bases
ATGGGAATAACGGAAAGATACTTTCAACTGGGAACGGAGCATAATGTCATTCATCTGCCCTATCGCCCGAACGGCTTCGG
CATCTTTATCTTGGGGGACAGAACCCACTTTGTCGGACATGATTCAAGCTTTTGGCAGCAGCATTATGGCAGAAATCAGC
TTCTGAGCATGTTGATGAATGAAGGATACACTCTTTTTAACAGCAATCTGTTCGGAAGGCATTGGGGGGCGGAAAAAGCA
GTCACCTATGCCAAACAGCTGATACATTCTGTGCTGAAGCAGGAAATCCTCAATCCGAAGATTCATATTTTAGCAGAAGG
CATGGGTGCTCTCGTGGCCGATGAACTGCTTCGTTTTTCCCCGGATCATATCCGCTCAGCCGCAATGTTGAATCCTTGTC
TCGATCTTCAGGCACATTATGAATCGGAAAAAGAAAATAAATTTTTCTATAAGCAATTTTTGAAAGAAGTATCGAAAAGC
TACGGAATTTCTGAAAAAGAAGCGGAAGCGATTCGTTATAAAACAATTCAAAGCTACCCGAGCGGCGTACCGGTTCATAT
ATGGCAGCGTATGACCGGAGCTCCATATCCCTACAGCGTACATGCGGAAGTTTTCAAGGAAAAACAGCAAAAGCAAGGCT
CACCGGTCGACATGACATTTCATTTATTTGAGCATCCAAGCAGAATTTATGCATCAATTTGCAAATTCTTTCATAGTCAT
GAAAAAGAATTATAG

Upstream 100 bases:

>100_bases
AATAGCCAAAAATGTAAAAGGCTAGGACTTTACCTTATTCGTTTCTTTTCTATTTACATAAGATAGCGTGAGATGAAGTG
TGAAAGGAGGCGGGCAAGCG

Downstream 100 bases:

>100_bases
AGAATATAATGACAACAGCCTTCTCTTTTGCGGAGGCTGTTTTGTTTTGGGAAATGAAAAACCGGAAGGGCGGCAGATGC
AATGGAATCAACGCTGATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MGITERYFQLGTEHNVIHLPYRPNGFGIFILGDRTHFVGHDSSFWQQHYGRNQLLSMLMNEGYTLFNSNLFGRHWGAEKA
VTYAKQLIHSVLKQEILNPKIHILAEGMGALVADELLRFSPDHIRSAAMLNPCLDLQAHYESEKENKFFYKQFLKEVSKS
YGISEKEAEAIRYKTIQSYPSGVPVHIWQRMTGAPYPYSVHAEVFKEKQQKQGSPVDMTFHLFEHPSRIYASICKFFHSH
EKEL

Sequences:

>Translated_244_residues
MGITERYFQLGTEHNVIHLPYRPNGFGIFILGDRTHFVGHDSSFWQQHYGRNQLLSMLMNEGYTLFNSNLFGRHWGAEKA
VTYAKQLIHSVLKQEILNPKIHILAEGMGALVADELLRFSPDHIRSAAMLNPCLDLQAHYESEKENKFFYKQFLKEVSKS
YGISEKEAEAIRYKTIQSYPSGVPVHIWQRMTGAPYPYSVHAEVFKEKQQKQGSPVDMTFHLFEHPSRIYASICKFFHSH
EKEL
>Mature_243_residues
GITERYFQLGTEHNVIHLPYRPNGFGIFILGDRTHFVGHDSSFWQQHYGRNQLLSMLMNEGYTLFNSNLFGRHWGAEKAV
TYAKQLIHSVLKQEILNPKIHILAEGMGALVADELLRFSPDHIRSAAMLNPCLDLQAHYESEKENKFFYKQFLKEVSKSY
GISEKEAEAIRYKTIQSYPSGVPVHIWQRMTGAPYPYSVHAEVFKEKQQKQGSPVDMTFHLFEHPSRIYASICKFFHSHE
KEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YJAU_BACSU (O35001)

Other databases:

- EMBL:   D86376
- EMBL:   AL009126
- PIR:   D69842
- RefSeq:   NP_389010.1
- ProteinModelPortal:   O35001
- EnsemblBacteria:   EBBACT00000000762
- GeneID:   936395
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU11280
- NMPDR:   fig|224308.1.peg.1129
- GenoList:   BSU11280
- GeneTree:   EBGT00050000001738
- HOGENOM:   HBG313733
- OMA:   LAYDAKE
- ProtClustDB:   CLSK873452
- BioCyc:   BSUB:BSU11280-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28338; Mature: 28206

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGITERYFQLGTEHNVIHLPYRPNGFGIFILGDRTHFVGHDSSFWQQHYGRNQLLSMLMN
CCCHHHHHHCCCCCCEEECCCCCCCEEEEEECCCEEECCCCHHHHHHHCCHHHHHHHHHH
EGYTLFNSNLFGRHWGAEKAVTYAKQLIHSVLKQEILNPKIHILAEGMGALVADELLRFS
CCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCC
PDHIRSAAMLNPCLDLQAHYESEKENKFFYKQFLKEVSKSYGISEKEAEAIRYKTIQSYP
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
SGVPVHIWQRMTGAPYPYSVHAEVFKEKQQKQGSPVDMTFHLFEHPSRIYASICKFFHSH
CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHCHHHHHHHHHHHHHHH
EKEL
CCCC
>Mature Secondary Structure 
GITERYFQLGTEHNVIHLPYRPNGFGIFILGDRTHFVGHDSSFWQQHYGRNQLLSMLMN
CCHHHHHHCCCCCCEEECCCCCCCEEEEEECCCEEECCCCHHHHHHHCCHHHHHHHHHH
EGYTLFNSNLFGRHWGAEKAVTYAKQLIHSVLKQEILNPKIHILAEGMGALVADELLRFS
CCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCC
PDHIRSAAMLNPCLDLQAHYESEKENKFFYKQFLKEVSKSYGISEKEAEAIRYKTIQSYP
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
SGVPVHIWQRMTGAPYPYSVHAEVFKEKQQKQGSPVDMTFHLFEHPSRIYASICKFFHSH
CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHCHHHHHHHHHHHHHHH
EKEL
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9335269; 9384377