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The map label for this gene is yitT

Identifier: 16078176

GI number: 16078176

Start: 1188689

End: 1189531

Strand: Direct

Name: yitT

Synonym: BSU11120

Alternate gene names: 16078176

Gene position: 1188689-1189531 (Clockwise)

Preceding gene: 16078174

Following gene: 16078177

Centisome position: 28.2

GC content: 44.48

Gene sequence:

>843_bases
ATGGTACTAGATCAAACAAAAAAATTACTCATCGTCATCATCGGCGCTTTACTCAATGCTGCCGGGCTGAACTTATTTTT
GATACCTGCAGATGTATATGCCAGCGGATTTACAGGTGTTGCCCAGCTTTTATCAAGCGTCGTTGATCAATATGCCCCCT
TTTACATATCGACGGGAACGCTCTTGTTCCTCTTAAACATTCCGGTCGGTATTTTAGGATGGCTGAAGGTCGGCAAATCG
TTTACAGTGTACAGCATTTTAAGTGTCGCACTCACTACTCTGTTTATGGGGATCCTGCCGGAAACAAGCCTGTCACATGA
CATTTTGCTGAACGCGGTGTTCGGCGGCGTCATTTCCGCAGTCGGTATCGGCTTAACATTAAAATACGGAGCTTCGACAG
GCGGGCTTGATATCGTCGCCATGGTACTTGCAAAGTGGAAGGATAAACCCGTCGGCACGTATTTCTTCATTCTGAACGGG
ATTATCATCTTGACGGCAGGATTATTGCAAGGTTGGGAGAAAGCATTATATACCCTGGTTACACTATATGTGACAACGAG
GGTGATCGACGCCATTCACACTCGCCACATGAAGCTTACGGCAATGATTGTGACGAAAAAAGCGGACGAAATCAAGGAAG
CCATTTACGGAAAAATGGTGCGCGGCATCACAACTGTTCCGGCAAAAGGAGCATTTACGAACGAACAGAAAGAAATGATG
ATTATCGTCATCACGAGGTATGAACTGTACGATTTAGAAAAGATCGTCAAAGAAGTTGATCCAAAAGCATTTACGAACAT
CGTTCAAACGACAGGGATTTTTGGTTTCTTTAGAAAAGACTGA

Upstream 100 bases:

>100_bases
AGAGTTAAGCCAACTATATCATATTAATTTGCCAAAATCGTGTTCAAATATTTGTTTTAAGGGAAAACATAATAAAGAAG
AAAGAGCGGAGGAACATGCC

Downstream 100 bases:

>100_bases
CGAAAGCAGGTGGAAGTCGTGAAACGGCTGCTTGTGATGCTCCTCCCCGTGCTGCTTTTGATAGGCTGCGGGAAAGATGA
GCAGACAGAACCCGATAAGG

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MVLDQTKKLLIVIIGALLNAAGLNLFLIPADVYASGFTGVAQLLSSVVDQYAPFYISTGTLLFLLNIPVGILGWLKVGKS
FTVYSILSVALTTLFMGILPETSLSHDILLNAVFGGVISAVGIGLTLKYGASTGGLDIVAMVLAKWKDKPVGTYFFILNG
IIILTAGLLQGWEKALYTLVTLYVTTRVIDAIHTRHMKLTAMIVTKKADEIKEAIYGKMVRGITTVPAKGAFTNEQKEMM
IIVITRYELYDLEKIVKEVDPKAFTNIVQTTGIFGFFRKD

Sequences:

>Translated_280_residues
MVLDQTKKLLIVIIGALLNAAGLNLFLIPADVYASGFTGVAQLLSSVVDQYAPFYISTGTLLFLLNIPVGILGWLKVGKS
FTVYSILSVALTTLFMGILPETSLSHDILLNAVFGGVISAVGIGLTLKYGASTGGLDIVAMVLAKWKDKPVGTYFFILNG
IIILTAGLLQGWEKALYTLVTLYVTTRVIDAIHTRHMKLTAMIVTKKADEIKEAIYGKMVRGITTVPAKGAFTNEQKEMM
IIVITRYELYDLEKIVKEVDPKAFTNIVQTTGIFGFFRKD
>Mature_280_residues
MVLDQTKKLLIVIIGALLNAAGLNLFLIPADVYASGFTGVAQLLSSVVDQYAPFYISTGTLLFLLNIPVGILGWLKVGKS
FTVYSILSVALTTLFMGILPETSLSHDILLNAVFGGVISAVGIGLTLKYGASTGGLDIVAMVLAKWKDKPVGTYFFILNG
IIILTAGLLQGWEKALYTLVTLYVTTRVIDAIHTRHMKLTAMIVTKKADEIKEAIYGKMVRGITTVPAKGAFTNEQKEMM
IIVITRYELYDLEKIVKEVDPKAFTNIVQTTGIFGFFRKD

Specific function: Unknown

COG id: COG1284

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0750 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YITT_BACSU (P39803)

Other databases:

- EMBL:   D16311
- EMBL:   Y09476
- EMBL:   Z79580
- EMBL:   AL009126
- PIR:   A49921
- RefSeq:   NP_388993.1
- ProteinModelPortal:   P39803
- SMR:   P39803
- EnsemblBacteria:   EBBACT00000002794
- GeneID:   939346
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU11120
- NMPDR:   fig|224308.1.peg.1112
- GenoList:   BSU11120
- GeneTree:   EBGT00070000031940
- HOGENOM:   HBG475521
- OMA:   RYELYDL
- ProtClustDB:   CLSK873458
- BioCyc:   BSUB:BSU11120-MONOMER
- InterPro:   IPR003740
- InterPro:   IPR019264

Pfam domain/function: PF02588 DUF161; PF10035 DUF2179

EC number: NA

Molecular weight: Translated: 30536; Mature: 30536

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe315e78)-; HASH(0xdfc0b60)-; HASH(0xe1a1acc)-; HASH(0xe3d58dc)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLDQTKKLLIVIIGALLNAAGLNLFLIPADVYASGFTGVAQLLSSVVDQYAPFYISTGT
CCCCHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHCCHHHHHHHHHHHHHHHCCEEEECCC
LLFLLNIPVGILGWLKVGKSFTVYSILSVALTTLFMGILPETSLSHDILLNAVFGGVISA
EEHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
VGIGLTLKYGASTGGLDIVAMVLAKWKDKPVGTYFFILNGIIILTAGLLQGWEKALYTLV
HHHCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLYVTTRVIDAIHTRHMKLTAMIVTKKADEIKEAIYGKMVRGITTVPAKGAFTNEQKEMM
HHHHHHHHHHHHHHHHHEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
IIVITRYELYDLEKIVKEVDPKAFTNIVQTTGIFGFFRKD
EEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEECH
>Mature Secondary Structure
MVLDQTKKLLIVIIGALLNAAGLNLFLIPADVYASGFTGVAQLLSSVVDQYAPFYISTGT
CCCCHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHCCHHHHHHHHHHHHHHHCCEEEECCC
LLFLLNIPVGILGWLKVGKSFTVYSILSVALTTLFMGILPETSLSHDILLNAVFGGVISA
EEHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
VGIGLTLKYGASTGGLDIVAMVLAKWKDKPVGTYFFILNGIIILTAGLLQGWEKALYTLV
HHHCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLYVTTRVIDAIHTRHMKLTAMIVTKKADEIKEAIYGKMVRGITTVPAKGAFTNEQKEMM
HHHHHHHHHHHHHHHHHEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
IIVITRYELYDLEKIVKEVDPKAFTNIVQTTGIFGFFRKD
EEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEECH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8226659; 9025291; 9353931; 9384377