Click here to switch to the map view.

The map label for this gene is yitR

Identifier: 16078173

GI number: 16078173

Start: 1185608

End: 1185901

Strand: Direct

Name: yitR

Synonym: BSU11090

Alternate gene names: 16078173

Gene position: 1185608-1185901 (Clockwise)

Preceding gene: 255767248

Following gene: 16078174

Centisome position: 28.12

GC content: 39.12

Gene sequence:

>294_bases
ATGGAAATCAGCATCAATTATCTATTAATTGTCATCGCGCTTTTATTCTTTGTGGTTGCCTATTTTGTCGGAATCAAAAA
ACAAACCTGGATGTTGGCTGGGTTTAACGAGGCGCGTATACGGGATAAAGATCGGCTGGCCAGAATAGCAGGCTACTTTT
TCTTGAATTCCGGTTTGTTCATTTTGCTGAATAGTTTTATCTCATTTCAAGGTCAGGAGCAGCTCATACCTCCGCTTATA
CTGGCATATGGAGCAGGGGTTATTATTTATGTCAATAAAAAATTAGTAGAGTAG

Upstream 100 bases:

>100_bases
CCGTTCCTCAATGCGCTTGTCGTCCTGCTGCTGATTGCAGTAAGCTGCGCCGCTTTTTTTCTTTTTCTTAACATCAAGTA
ATCTTGTAGGAGGCTGTAAG

Downstream 100 bases:

>100_bases
AAAAAGAAGGGCAGAGCGAAATATCTCTGCCCTTCTTTTTTGGGAAAATAAGAACGAAGCACCACATACAAGTTTTTGTA
TTTTTGATAGGATGAAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MEISINYLLIVIALLFFVVAYFVGIKKQTWMLAGFNEARIRDKDRLARIAGYFFLNSGLFILLNSFISFQGQEQLIPPLI
LAYGAGVIIYVNKKLVE

Sequences:

>Translated_97_residues
MEISINYLLIVIALLFFVVAYFVGIKKQTWMLAGFNEARIRDKDRLARIAGYFFLNSGLFILLNSFISFQGQEQLIPPLI
LAYGAGVIIYVNKKLVE
>Mature_97_residues
MEISINYLLIVIALLFFVVAYFVGIKKQTWMLAGFNEARIRDKDRLARIAGYFFLNSGLFILLNSFISFQGQEQLIPPLI
LAYGAGVIIYVNKKLVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YITR_BACSU (O06753)

Other databases:

- EMBL:   Y09476
- EMBL:   AL009126
- PIR:   C69841
- RefSeq:   NP_388990.1
- EnsemblBacteria:   EBBACT00000003368
- GeneID:   939798
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU11090
- NMPDR:   fig|224308.1.peg.1109
- GenoList:   BSU11090
- GeneTree:   EBGT00050000004577
- HOGENOM:   HBG033278
- OMA:   AGYFFLN
- ProtClustDB:   CLSK887045
- BioCyc:   BSUB:BSU11090-MONOMER
- InterPro:   IPR017259
- PIRSF:   PIRSF037672

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11063; Mature: 11063

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd6e0fa8)-; HASH(0xb8b1894)-; HASH(0xc80e280)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEISINYLLIVIALLFFVVAYFVGIKKQTWMLAGFNEARIRDKDRLARIAGYFFLNSGLF
CEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCHHHHHHHHHHHHHHCCHH
ILLNSFISFQGQEQLIPPLILAYGAGVIIYVNKKLVE
HHHHHHHCCCCCCCCCHHHHHHHCCCEEEEECCEECH
>Mature Secondary Structure
MEISINYLLIVIALLFFVVAYFVGIKKQTWMLAGFNEARIRDKDRLARIAGYFFLNSGLF
CEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCHHHHHHHHHHHHHHCCHH
ILLNSFISFQGQEQLIPPLILAYGAGVIIYVNKKLVE
HHHHHHHCCCCCCCCCHHHHHHHCCCEEEEECCEECH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377