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The map label for this gene is yisX

Identifier: 16078153

GI number: 16078153

Start: 1168199

End: 1168837

Strand: Reverse

Name: yisX

Synonym: BSU10890

Alternate gene names: 16078153

Gene position: 1168837-1168199 (Counterclockwise)

Preceding gene: 16078155

Following gene: 16078150

Centisome position: 27.73

GC content: 44.91

Gene sequence:

>639_bases
ATGAATAAAATCGCAATTCAAAAACCGAACATACCGGAAAACCTGCAAACCGCAGATTTTCATGATGCCGTGACACAGGA
TGATGTAATCAGCATGCATTTGTTTGAAGATTGCACCATCTGCGGCGAAGATATCGAAAGACTATGTGTTGAAAAAACGG
TATTCAGAAATGTCGTCTTTATCGATGTGTCTTTTCGGCATATTGAACTGACCGATGTGATCTTTGAAAAATGCGATTTA
TCAAACGCCGATTTCAGCGGGGCTGTCATTCACAGAACTTCAGTTAAGCAGTCAAAAATGGTTGGAATGAATGTGGCGGA
AGCAACGCTGCGGAATGTTTCATTCGAGGAATGCCACGGACATTTCAGCTCATTTTCGTACTCAAATATGAAACAAGTTC
GATTTGATCACTGTGCTCTTATGCAAAGTGAATGCAGCGATACGGTGCTCCAGCAGACACACTTTGACGGATGCGAATTG
GAAGGCGCCAGCTTTACCGGCACGTCCCTTCAAAACATGGACATCAGCACGTGCCGTTTTGAACAGCTTCATGTCTCCCT
CGACAAATTGAAAGGCTGCAAAATCGCACCTGAGCACGCGATTGCCTTCGCCAGGGCACTGGGAGCTGTCATCGTATAA

Upstream 100 bases:

>100_bases
AAAGGCTCTTCACGATTTACTATATGTATCAATTTCCTTAACGATCTATTAAATTGAACCCGGAAGCCTCTGTTTTTCGG
GCAGCAAAGGATGTCATCAC

Downstream 100 bases:

>100_bases
CCAAAGCCTAGGACATCATCAGGCGGCGTGCTGTTTCAGCTGCCGCTTTAATGCCAGTTTCCAAATCTCCAAGAGATGCA
TAGGAATATGACAGCCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MNKIAIQKPNIPENLQTADFHDAVTQDDVISMHLFEDCTICGEDIERLCVEKTVFRNVVFIDVSFRHIELTDVIFEKCDL
SNADFSGAVIHRTSVKQSKMVGMNVAEATLRNVSFEECHGHFSSFSYSNMKQVRFDHCALMQSECSDTVLQQTHFDGCEL
EGASFTGTSLQNMDISTCRFEQLHVSLDKLKGCKIAPEHAIAFARALGAVIV

Sequences:

>Translated_212_residues
MNKIAIQKPNIPENLQTADFHDAVTQDDVISMHLFEDCTICGEDIERLCVEKTVFRNVVFIDVSFRHIELTDVIFEKCDL
SNADFSGAVIHRTSVKQSKMVGMNVAEATLRNVSFEECHGHFSSFSYSNMKQVRFDHCALMQSECSDTVLQQTHFDGCEL
EGASFTGTSLQNMDISTCRFEQLHVSLDKLKGCKIAPEHAIAFARALGAVIV
>Mature_212_residues
MNKIAIQKPNIPENLQTADFHDAVTQDDVISMHLFEDCTICGEDIERLCVEKTVFRNVVFIDVSFRHIELTDVIFEKCDL
SNADFSGAVIHRTSVKQSKMVGMNVAEATLRNVSFEECHGHFSSFSYSNMKQVRFDHCALMQSECSDTVLQQTHFDGCEL
EGASFTGTSLQNMDISTCRFEQLHVSLDKLKGCKIAPEHAIAFARALGAVIV

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 pentapeptide repeat domains

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YISX_BACSU (O06733)

Other databases:

- EMBL:   Y09476
- EMBL:   AL009126
- PIR:   G69838
- RefSeq:   NP_388970.1
- ProteinModelPortal:   O06733
- SMR:   O06733
- EnsemblBacteria:   EBBACT00000000529
- GeneID:   939343
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU10890
- NMPDR:   fig|224308.1.peg.1089
- GenoList:   BSU10890
- GeneTree:   EBGT00050000001398
- HOGENOM:   HBG517045
- OMA:   LEMCEII
- ProtClustDB:   CLSK887041
- BioCyc:   BSUB:BSU10890-MONOMER
- InterPro:   IPR001646
- InterPro:   IPR012334
- Gene3D:   G3DSA:2.160.20.10

Pfam domain/function: PF00805 Pentapeptide

EC number: NA

Molecular weight: Translated: 23730; Mature: 23730

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIAIQKPNIPENLQTADFHDAVTQDDVISMHLFEDCTICGEDIERLCVEKTVFRNVVF
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEHHHHCCHHCHHHHHHHHHHHHHHCEEEE
IDVSFRHIELTDVIFEKCDLSNADFSGAVIHRTSVKQSKMVGMNVAEATLRNVSFEECHG
EEEEEEEEEHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHCCHHHHHHHHCCCHHHHHC
HFSSFSYSNMKQVRFDHCALMQSECSDTVLQQTHFDGCELEGASFTGTSLQNMDISTCRF
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCHHHH
EQLHVSLDKLKGCKIAPEHAIAFARALGAVIV
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNKIAIQKPNIPENLQTADFHDAVTQDDVISMHLFEDCTICGEDIERLCVEKTVFRNVVF
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEHHHHCCHHCHHHHHHHHHHHHHHCEEEE
IDVSFRHIELTDVIFEKCDLSNADFSGAVIHRTSVKQSKMVGMNVAEATLRNVSFEECHG
EEEEEEEEEHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHCCHHHHHHHHCCCHHHHHC
HFSSFSYSNMKQVRFDHCALMQSECSDTVLQQTHFDGCELEGASFTGTSLQNMDISTCRF
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCHHHH
EQLHVSLDKLKGCKIAPEHAIAFARALGAVIV
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377