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The map label for this gene is yhcQ

Identifier: 16077983

GI number: 16077983

Start: 990612

End: 991265

Strand: Reverse

Name: yhcQ

Synonym: BSU09180

Alternate gene names: 16077983

Gene position: 991265-990612 (Counterclockwise)

Preceding gene: 255767213

Following gene: 16077979

Centisome position: 23.51

GC content: 43.27

Gene sequence:

>654_bases
TTGGATCAGTTCAATCAGCAGCAGCAATCCCAAATGAACAAAGGTATTCCTGGCAAACCGCATAAAAACCACGGCGGACA
TGAAATGTTTGATATGCATGAGGTGCTTTCCGGAACACTTACTGTGCTTGATCAGTTTATGATGCTGAGACAATTCTGTA
AGGATCAAGAATTACTAAACATCCTTGATCGTCAACATCAATTCATCACATCTCAATACAATATAACTGCAGAATGCTTC
AAAACAGGAAGCGAACCTTCACAAAAAACAGCAACTTATATGATGAAGGAAGACAACCAGACTGTTTACGGCATGCAGCC
GTCACAGCCTAAAAAACCTGTTCAATCCATGAATGATATTGATGACAGCATCATCAGCCGACAAATGCTTTGCGCGATTA
AAGCACAAGCTTCTATGCTGACGATGGCTTCTCTGGAAATGACAAATCCGGCCGTAAGACGCGTACTGTCTGCGCAAATT
CAGGAGTATGTTGAAATGGCATTTGAAATTTTCCTATACCAAAACAAACACGGCTATTACCAGGTTCCTCAGCTTGATGC
GCAGGATATGGAACAGCTGCGAAATTCATTCGCCCCTGCCCAAGGACAAATGCCTCCGACACAAGGCGGAATGGGTCAGC
AAGGACTTCACTAA

Upstream 100 bases:

>100_bases
CATTTCGACAGACAGCATATAATTCCTTTCAGGCTTCTGCATAATACACGGCAGACTGACACAAAATACAGCTGATCTGA
AAAAAAAGGAGGAATTCGGT

Downstream 100 bases:

>100_bases
TAACAAAGGCATTGGATAGATACTATCCAATGCCGCACTGTTTTTTTCAAATTTTTTCTTAAAATCTTTTTCAAATTGAT
CAAGACTTTCCTTTGTTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MDQFNQQQQSQMNKGIPGKPHKNHGGHEMFDMHEVLSGTLTVLDQFMMLRQFCKDQELLNILDRQHQFITSQYNITAECF
KTGSEPSQKTATYMMKEDNQTVYGMQPSQPKKPVQSMNDIDDSIISRQMLCAIKAQASMLTMASLEMTNPAVRRVLSAQI
QEYVEMAFEIFLYQNKHGYYQVPQLDAQDMEQLRNSFAPAQGQMPPTQGGMGQQGLH

Sequences:

>Translated_217_residues
MDQFNQQQQSQMNKGIPGKPHKNHGGHEMFDMHEVLSGTLTVLDQFMMLRQFCKDQELLNILDRQHQFITSQYNITAECF
KTGSEPSQKTATYMMKEDNQTVYGMQPSQPKKPVQSMNDIDDSIISRQMLCAIKAQASMLTMASLEMTNPAVRRVLSAQI
QEYVEMAFEIFLYQNKHGYYQVPQLDAQDMEQLRNSFAPAQGQMPPTQGGMGQQGLH
>Mature_217_residues
MDQFNQQQQSQMNKGIPGKPHKNHGGHEMFDMHEVLSGTLTVLDQFMMLRQFCKDQELLNILDRQHQFITSQYNITAECF
KTGSEPSQKTATYMMKEDNQTVYGMQPSQPKKPVQSMNDIDDSIISRQMLCAIKAQASMLTMASLEMTNPAVRRVLSAQI
QEYVEMAFEIFLYQNKHGYYQVPQLDAQDMEQLRNSFAPAQGQMPPTQGGMGQQGLH

Specific function: Unknown

COG id: COG5577

COG function: function code M; Spore coat protein

Gene ontology:

Cell location: Spore wall, spore coat

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CotF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHCQ_BACSU (P54601)

Other databases:

- EMBL:   X96983
- EMBL:   AL009126
- PIR:   E69823
- RefSeq:   NP_388799.1
- ProteinModelPortal:   P54601
- EnsemblBacteria:   EBBACT00000003917
- GeneID:   936236
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU09180
- NMPDR:   fig|224308.1.peg.918
- GenoList:   BSU09180
- GeneTree:   EBGT00050000002340
- HOGENOM:   HBG615550
- OMA:   YYQVPQL
- ProtClustDB:   CLSK873735
- BioCyc:   BSUB:BSU09180-MONOMER
- InterPro:   IPR012851

Pfam domain/function: PF07875 Coat_F

EC number: NA

Molecular weight: Translated: 24792; Mature: 24792

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
8.3 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
8.3 %Met     (Mature Protein)
9.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQFNQQQQSQMNKGIPGKPHKNHGGHEMFDMHEVLSGTLTVLDQFMMLRQFCKDQELLN
CCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
ILDRQHQFITSQYNITAECFKTGSEPSQKTATYMMKEDNQTVYGMQPSQPKKPVQSMNDI
HHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHEECCCCEEECCCCCCCCCHHHHHHHH
DDSIISRQMLCAIKAQASMLTMASLEMTNPAVRRVLSAQIQEYVEMAFEIFLYQNKHGYY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
QVPQLDAQDMEQLRNSFAPAQGQMPPTQGGMGQQGLH
ECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDQFNQQQQSQMNKGIPGKPHKNHGGHEMFDMHEVLSGTLTVLDQFMMLRQFCKDQELLN
CCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
ILDRQHQFITSQYNITAECFKTGSEPSQKTATYMMKEDNQTVYGMQPSQPKKPVQSMNDI
HHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHEECCCCEEECCCCCCCCCHHHHHHHH
DDSIISRQMLCAIKAQASMLTMASLEMTNPAVRRVLSAQIQEYVEMAFEIFLYQNKHGYY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
QVPQLDAQDMEQLRNSFAPAQGQMPPTQGGMGQQGLH
ECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377