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The map label for this gene is yhcE

Identifier: 16077970

GI number: 16077970

Start: 980473

End: 981234

Strand: Direct

Name: yhcE

Synonym: BSU09050

Alternate gene names: 16077970

Gene position: 980473-981234 (Clockwise)

Preceding gene: 16077969

Following gene: 16077971

Centisome position: 23.26

GC content: 38.71

Gene sequence:

>762_bases
ATGAATTCTTTTTTAGGTTTATTAAAGAAAGATATCAAGCTTTCAAGAATGTGGCTGCTAGTATGGATATGCGGAATCAT
TTTCTTATTGGGAACAGGCCATATTATAGCTTCTCGCACGAAAGAACCTCTAGTCATTTTTGGTTTTTTTGTTGCAGTTG
CTTTTTTTCTGCTTTTCTTATCTCCTGTTTTTGTTTTTTATCACCTTCGCAAGGAAGGGAAATCACAGCTTTGGCTGTAC
AATCCAAATGGCGGCTTATGGCTGTTTTCTTCTAAATTGGCAGCATCTTTGCTCTATCAATTTGTGATTCAGTTGGCATT
AACAGCCTATGGCATATGGATGTATCATATGCTCTCTGTAAAAAATCTGCTGGAGCATCAAGTTGATATAACGAGTACAG
TGGCTTTGCTGAATATGTATGGGCTTATTTCTTCGTTAGATATGTCAGTAACAGTCATTGTGTTTTGGACTGTTTTTCAC
TCTCTCAGAAATTGGCGCGGAATGCGGTGGGCTGCGATGGTTCTGTTGGTCGCAATGTGGTTATTCTTCGATGAATACAT
CATAAGCCCTTTGGTTGAATCTCAAAAGCATTTCTGGCCTGTAACAGTCTATTGCAATTTTGATTTCCACTTCCACAATG
TTTGGAGATTGGAACTAAAACCTATCCATCTGTCTGTGCTAGGGTTTCCTATTGCTATAGTCATCACATTCTTGCTGCTC
ATCATGGCTTCAAAACTGCTTGATCGTAAAGTAGAGGTGTAA

Upstream 100 bases:

>100_bases
ATGTTTTTATCAAATAAATCCATGGAATATGTTGTATTCCACCTTGATCTAGTGTACTATGTTACTCATACACCGAGGAT
TTTTTCCGGGAGGTAAAGAC

Downstream 100 bases:

>100_bases
ATATGGACAATCAATTCCAATCCTCGAAACCGATTTATCTGCAGATCGCTGATCAGATCTTTTATAGGCTGGTCAGGAAG
GAGCTGCTCCCAGGAGACAA

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MNSFLGLLKKDIKLSRMWLLVWICGIIFLLGTGHIIASRTKEPLVIFGFFVAVAFFLLFLSPVFVFYHLRKEGKSQLWLY
NPNGGLWLFSSKLAASLLYQFVIQLALTAYGIWMYHMLSVKNLLEHQVDITSTVALLNMYGLISSLDMSVTVIVFWTVFH
SLRNWRGMRWAAMVLLVAMWLFFDEYIISPLVESQKHFWPVTVYCNFDFHFHNVWRLELKPIHLSVLGFPIAIVITFLLL
IMASKLLDRKVEV

Sequences:

>Translated_253_residues
MNSFLGLLKKDIKLSRMWLLVWICGIIFLLGTGHIIASRTKEPLVIFGFFVAVAFFLLFLSPVFVFYHLRKEGKSQLWLY
NPNGGLWLFSSKLAASLLYQFVIQLALTAYGIWMYHMLSVKNLLEHQVDITSTVALLNMYGLISSLDMSVTVIVFWTVFH
SLRNWRGMRWAAMVLLVAMWLFFDEYIISPLVESQKHFWPVTVYCNFDFHFHNVWRLELKPIHLSVLGFPIAIVITFLLL
IMASKLLDRKVEV
>Mature_253_residues
MNSFLGLLKKDIKLSRMWLLVWICGIIFLLGTGHIIASRTKEPLVIFGFFVAVAFFLLFLSPVFVFYHLRKEGKSQLWLY
NPNGGLWLFSSKLAASLLYQFVIQLALTAYGIWMYHMLSVKNLLEHQVDITSTVALLNMYGLISSLDMSVTVIVFWTVFH
SLRNWRGMRWAAMVLLVAMWLFFDEYIISPLVESQKHFWPVTVYCNFDFHFHNVWRLELKPIHLSVLGFPIAIVITFLLL
IMASKLLDRKVEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHCE_BACSU (P54589)

Other databases:

- EMBL:   X96983
- EMBL:   AL009126
- PIR:   A69822
- RefSeq:   NP_388786.1
- ProteinModelPortal:   P54589
- EnsemblBacteria:   EBBACT00000002025
- GeneID:   939256
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU09050
- NMPDR:   fig|224308.1.peg.905
- GenoList:   BSU09050
- GeneTree:   EBGT00050000002254
- HOGENOM:   HBG338664
- OMA:   WLYNPNG
- ProtClustDB:   CLSK886930
- BioCyc:   BSUB:BSU09050-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29459; Mature: 29459

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd2cb3ac)-; HASH(0xd5399a4)-; HASH(0xdce4598)-; HASH(0xdcdfde4)-; HASH(0xdd059b8)-; HASH(0xdef5d48)-;

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSFLGLLKKDIKLSRMWLLVWICGIIFLLGTGHIIASRTKEPLVIFGFFVAVAFFLLFL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHH
SPVFVFYHLRKEGKSQLWLYNPNGGLWLFSSKLAASLLYQFVIQLALTAYGIWMYHMLSV
HHHHHHHHHHHCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNLLEHQVDITSTVALLNMYGLISSLDMSVTVIVFWTVFHSLRNWRGMRWAAMVLLVAMW
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LFFDEYIISPLVESQKHFWPVTVYCNFDFHFHNVWRLELKPIHLSVLGFPIAIVITFLLL
HHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHH
IMASKLLDRKVEV
HHHHHHHHHCCCH
>Mature Secondary Structure
MNSFLGLLKKDIKLSRMWLLVWICGIIFLLGTGHIIASRTKEPLVIFGFFVAVAFFLLFL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHH
SPVFVFYHLRKEGKSQLWLYNPNGGLWLFSSKLAASLLYQFVIQLALTAYGIWMYHMLSV
HHHHHHHHHHHCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNLLEHQVDITSTVALLNMYGLISSLDMSVTVIVFWTVFHSLRNWRGMRWAAMVLLVAMW
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LFFDEYIISPLVESQKHFWPVTVYCNFDFHFHNVWRLELKPIHLSVLGFPIAIVITFLLL
HHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHH
IMASKLLDRKVEV
HHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377