Click here to switch to the map view.

The map label for this gene is yhbI

Identifier: 16077964

GI number: 16077964

Start: 976569

End: 977033

Strand: Direct

Name: yhbI

Synonym: BSU08990

Alternate gene names: 16077964

Gene position: 976569-977033 (Clockwise)

Preceding gene: 16077963

Following gene: 16077965

Centisome position: 23.17

GC content: 43.44

Gene sequence:

>465_bases
TTGACTGAATCAGAACGTGCTTTGCTCACTTTTGAACAGCTCTTCGATACGTCTCGGGCGATATATAAAAAACAGAAGAA
GATATTGGAGATTGTGCTTGAGCCTTTTGATATTACAGTCCTTCAATATTTGCTGATGTTTAAAATTCATCAAAGCGGAA
GCACCCCGCTAAGCAAGCTGGCAATGTCGCTTGATCTTAAGCCTGCTTCTGTGACGCGGATGACAGATATTCTGTATAAG
CGCCAATTGATGAATCGATATGACAGTCCGGATGACCGCCGTATCGTCATGATTCAGTTAACCGAAGAGGGGGAAGAACT
GATAGAAAAAGCCGCTGTGCAATATGCAAAAATGGGTGCTGGCTTGTACCAAAAGCTTGATACCTCCCAGCTGCAGTATT
TGCGCAAACTAGCCGGAAGTTTAACGAAGCTTGCTGAAGGCTGTTCAGAAAAAAGCGGTAATTAA

Upstream 100 bases:

>100_bases
AAAATACGGGAGAAAAAGAAATTTTTCCTTTGACAAATCTTCTTTCATTTATTAATATTTTATCTTGTGAACTATTATTG
AGGAATGAGGTGAAAAGGAG

Downstream 100 bases:

>100_bases
AAACTTCTCACATATTTTCACCAGCTTTCCGCAAAATGATAGAGGATGAAACGAAAGGAGAAAACAAAATGAACAGAGGA
CGTTTAATTCTGACCAACAT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MTESERALLTFEQLFDTSRAIYKKQKKILEIVLEPFDITVLQYLLMFKIHQSGSTPLSKLAMSLDLKPASVTRMTDILYK
RQLMNRYDSPDDRRIVMIQLTEEGEELIEKAAVQYAKMGAGLYQKLDTSQLQYLRKLAGSLTKLAEGCSEKSGN

Sequences:

>Translated_154_residues
MTESERALLTFEQLFDTSRAIYKKQKKILEIVLEPFDITVLQYLLMFKIHQSGSTPLSKLAMSLDLKPASVTRMTDILYK
RQLMNRYDSPDDRRIVMIQLTEEGEELIEKAAVQYAKMGAGLYQKLDTSQLQYLRKLAGSLTKLAEGCSEKSGN
>Mature_153_residues
TESERALLTFEQLFDTSRAIYKKQKKILEIVLEPFDITVLQYLLMFKIHQSGSTPLSKLAMSLDLKPASVTRMTDILYKR
QLMNRYDSPDDRRIVMIQLTEEGEELIEKAAVQYAKMGAGLYQKLDTSQLQYLRKLAGSLTKLAEGCSEKSGN

Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHBI_BACSU (O31592)

Other databases:

- EMBL:   AL009126
- PIR:   C69821
- RefSeq:   NP_388780.1
- ProteinModelPortal:   O31592
- SMR:   O31592
- EnsemblBacteria:   EBBACT00000003263
- GeneID:   939247
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU08990
- NMPDR:   fig|224308.1.peg.899
- GenoList:   BSU08990
- GeneTree:   EBGT00070000031942
- HOGENOM:   HBG338663
- OMA:   RMTDILY
- ProtClustDB:   CLSK886925
- BioCyc:   BSUB:BSU08990-MONOMER
- GO:   GO:0005622
- InterPro:   IPR000835
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- PRINTS:   PR00598
- SMART:   SM00347

Pfam domain/function: PF01047 MarR

EC number: NA

Molecular weight: Translated: 17603; Mature: 17472

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: PS01117 HTH_MARR_1; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTESERALLTFEQLFDTSRAIYKKQKKILEIVLEPFDITVLQYLLMFKIHQSGSTPLSKL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHH
AMSLDLKPASVTRMTDILYKRQLMNRYDSPDDRRIVMIQLTEEGEELIEKAAVQYAKMGA
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHH
GLYQKLDTSQLQYLRKLAGSLTKLAEGCSEKSGN
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TESERALLTFEQLFDTSRAIYKKQKKILEIVLEPFDITVLQYLLMFKIHQSGSTPLSKL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHH
AMSLDLKPASVTRMTDILYKRQLMNRYDSPDDRRIVMIQLTEEGEELIEKAAVQYAKMGA
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHH
GLYQKLDTSQLQYLRKLAGSLTKLAEGCSEKSGN
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377