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The map label for this gene is ssuC

Identifier: 16077950

GI number: 16077950

Start: 963174

End: 964004

Strand: Direct

Name: ssuC

Synonym: BSU08850

Alternate gene names: 16077950

Gene position: 963174-964004 (Clockwise)

Preceding gene: 16077949

Following gene: 50812205

Centisome position: 22.85

GC content: 50.42

Gene sequence:

>831_bases
ATGATGAAAGCAGAGGCTGCGGGCTCGCTGCCCAAAACGAATGCGGAAGCGGTGCGAAAAAAGCCCGGAAGGAAGAGATA
CGGCTGGATGAAGGGGCTTTTACTGCCCGCTGTCATCATTGCCATCTGGCAGGTCATCGGCGGGCTGGGGGTTGTGTCCG
CTACAGTGCTGCCTACACCTGTTACGATTGTTCTGACCTTTAAGGAGCTTATTTTGTCCGGCGAACTGTTCGGCCATCTG
CAAATCAGCATTTATCGGGCGGCACTTGGTTTTTTGCTTGGCGCGGGGCTTGGATTGATGATCGGGATTTTGGCCGGATT
TTCCAAACGGACGGAGCTGTATCTTGATCCGTCGTTGCAAATGCTTAGAACCGTACCTCATCTGGCCGTCACGCCGCTGT
TTATTTTATGGTTCGGATTTGACGAAGTATCTAAAATTTTGCTGATTGCGCTCGGTGCCTTCTTTCCTGTCTATATCAAT
ACGTTTAACGGCATCCGCGGGGTTGACGCGAAGCTGTTTGAAGTCGCCCGGGTGCTTGAATTTAAATGGCATCAGCAGAT
ATCCAAAGTGATATTGCCGGCAGCCCTGCCCAATATATTGCTAGGCATTCGCTTATCGCTCGGCATTGCATGGCTCGGGC
TCGTTGTGGCAGAGCTGATGGGCTCAAGCTCGGGAGTCGGCTATATGATCATGGATGCGAGACAGTTTTCACAAACGAAT
AAAGTCTTTGCAGGGATTATCATTTTTGCAGTGGTTGGAAAGCTGACGGATTCCTTCGTCAGGCTGCTTGAACGAAAGCT
GTTAAAGTGGAGAAACAGCTACGAAGGATAA

Upstream 100 bases:

>100_bases
TTCGAACAAAGGCGATAGATAAGAAGATTGATGTGAAGGATGTTGTCGATAACACTTTTATCAAAAAAGCATTAGAGGAG
CATTCCTCAGGAGGTGATCA

Downstream 100 bases:

>100_bases
AAGATATAAAGGGGAGATGAATATGGAAATTCTTTGGTTTATACCGACTCATGGAGACGCGAGATATTTAGGATCTGAAA
GTGATGGACGGACTGCGGAT

Product: aliphatic sulfonate ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MMKAEAAGSLPKTNAEAVRKKPGRKRYGWMKGLLLPAVIIAIWQVIGGLGVVSATVLPTPVTIVLTFKELILSGELFGHL
QISIYRAALGFLLGAGLGLMIGILAGFSKRTELYLDPSLQMLRTVPHLAVTPLFILWFGFDEVSKILLIALGAFFPVYIN
TFNGIRGVDAKLFEVARVLEFKWHQQISKVILPAALPNILLGIRLSLGIAWLGLVVAELMGSSSGVGYMIMDARQFSQTN
KVFAGIIIFAVVGKLTDSFVRLLERKLLKWRNSYEG

Sequences:

>Translated_276_residues
MMKAEAAGSLPKTNAEAVRKKPGRKRYGWMKGLLLPAVIIAIWQVIGGLGVVSATVLPTPVTIVLTFKELILSGELFGHL
QISIYRAALGFLLGAGLGLMIGILAGFSKRTELYLDPSLQMLRTVPHLAVTPLFILWFGFDEVSKILLIALGAFFPVYIN
TFNGIRGVDAKLFEVARVLEFKWHQQISKVILPAALPNILLGIRLSLGIAWLGLVVAELMGSSSGVGYMIMDARQFSQTN
KVFAGIIIFAVVGKLTDSFVRLLERKLLKWRNSYEG
>Mature_276_residues
MMKAEAAGSLPKTNAEAVRKKPGRKRYGWMKGLLLPAVIIAIWQVIGGLGVVSATVLPTPVTIVLTFKELILSGELFGHL
QISIYRAALGFLLGAGLGLMIGILAGFSKRTELYLDPSLQMLRTVPHLAVTPLFILWFGFDEVSKILLIALGAFFPVYIN
TFNGIRGVDAKLFEVARVLEFKWHQQISKVILPAALPNILLGIRLSLGIAWLGLVVAELMGSSSGVGYMIMDARQFSQTN
KVFAGIIIFAVVGKLTDSFVRLLERKLLKWRNSYEG

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain

Homologues:

Organism=Escherichia coli, GI87081802, Length=241, Percent_Identity=48.9626556016597, Blast_Score=215, Evalue=2e-57,
Organism=Escherichia coli, GI1786564, Length=244, Percent_Identity=35.2459016393443, Blast_Score=130, Evalue=7e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SSUC_BACSU (P40401)

Other databases:

- EMBL:   L16808
- EMBL:   Z93102
- EMBL:   AL009126
- PIR:   I39928
- RefSeq:   NP_388765.1
- ProteinModelPortal:   P40401
- EnsemblBacteria:   EBBACT00000000804
- GeneID:   936208
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU08850
- NMPDR:   fig|224308.1.peg.884
- GenoList:   BSU08850
- GeneTree:   EBGT00050000000643
- HOGENOM:   HBG754934
- OMA:   SIQMIRA
- PhylomeDB:   P40401
- ProtClustDB:   CLSK2518213
- BioCyc:   BSUB:BSU08850-MONOMER
- InterPro:   IPR000515

Pfam domain/function: PF00528 BPD_transp_1

EC number: NA

Molecular weight: Translated: 30241; Mature: 30241

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe103f94)-; HASH(0xde68ce8)-; HASH(0xcfd6c90)-; HASH(0xccd27d4)-; HASH(0xc8a7dec)-; HASH(0xddedd14)-; HASH(0xd3bb7ac)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKAEAAGSLPKTNAEAVRKKPGRKRYGWMKGLLLPAVIIAIWQVIGGLGVVSATVLPTP
CCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC
VTIVLTFKELILSGELFGHLQISIYRAALGFLLGAGLGLMIGILAGFSKRTELYLDPSLQ
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHH
MLRTVPHLAVTPLFILWFGFDEVSKILLIALGAFFPVYINTFNGIRGVDAKLFEVARVLE
HHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
FKWHQQISKVILPAALPNILLGIRLSLGIAWLGLVVAELMGSSSGVGYMIMDARQFSQTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHH
KVFAGIIIFAVVGKLTDSFVRLLERKLLKWRNSYEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure
MMKAEAAGSLPKTNAEAVRKKPGRKRYGWMKGLLLPAVIIAIWQVIGGLGVVSATVLPTP
CCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC
VTIVLTFKELILSGELFGHLQISIYRAALGFLLGAGLGLMIGILAGFSKRTELYLDPSLQ
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHH
MLRTVPHLAVTPLFILWFGFDEVSKILLIALGAFFPVYINTFNGIRGVDAKLFEVARVLE
HHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
FKWHQQISKVILPAALPNILLGIRLSLGIAWLGLVVAELMGSSSGVGYMIMDARQFSQTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHH
KVFAGIIIFAVVGKLTDSFVRLLERKLLKWRNSYEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8011666; 9782504; 9384377