Click here to switch to the map view.

The map label for this gene is yfhK

Identifier: 16077923

GI number: 16077923

Start: 928803

End: 929321

Strand: Direct

Name: yfhK

Synonym: BSU08570

Alternate gene names: 16077923

Gene position: 928803-929321 (Clockwise)

Preceding gene: 16077922

Following gene: 16077924

Centisome position: 22.03

GC content: 44.12

Gene sequence:

>519_bases
ATGAAAAAGAAACAAGTAATGCTCGCTTTAACAGCTGCCGCAGGACTGGGTTTGACAGCACTTCATTCCGCTCCCGCAGC
AAAAGCTGCGCCCCTTCACGACATATCTGTCAGCATGCCATCATCCGATACTTACATCATAAAAGCAGGAAAGCTGAATG
TCCGGACTGAGCCAAATCATGAAGGTGATATTCTCGGCACTGTATCATCAGAACAAAAGGTAAAAGTCGATAGGTTCGTA
AATGCCGATTGGGCTCAAATTCATTTCAAAGGAAAGAAAGCATATATTTCAACTCACTTTTTAATGAAAACCGCAAGCCA
AGCGAAAACAACGAAACAGACAGCCTTCTATACACCGACGCCCGAAAACGGAAAAGCTAAGCAGCTCTCATCTGGAACAG
AGGTGACAATACTTGGGTGGGGATTCAGTGAAAACGGCGGATTTGACTTCACTTGGGCGTTCGTGGATTATGGCGGAGTT
AAAGGCTATATTCACACAAAGGATTTACAAATGCGATAA

Upstream 100 bases:

>100_bases
TTACCTTAACAGGAAGAAATCATAAACAAAACATGTTTCACCAGCCTGTCAATCAGGGAATACCACTTATATCTTGTCAA
AATGCGAGGAGGAGCTTTAT

Downstream 100 bases:

>100_bases
AAAGGCAGGCCGAGGCTTGTCTTTTTGCCTATGCATGAAACATTTCTTCTTTCTGCACGTAACAATGAGAAAGGAGATGA
TGATATGACGGGTTTAGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MKKKQVMLALTAAAGLGLTALHSAPAAKAAPLHDISVSMPSSDTYIIKAGKLNVRTEPNHEGDILGTVSSEQKVKVDRFV
NADWAQIHFKGKKAYISTHFLMKTASQAKTTKQTAFYTPTPENGKAKQLSSGTEVTILGWGFSENGGFDFTWAFVDYGGV
KGYIHTKDLQMR

Sequences:

>Translated_172_residues
MKKKQVMLALTAAAGLGLTALHSAPAAKAAPLHDISVSMPSSDTYIIKAGKLNVRTEPNHEGDILGTVSSEQKVKVDRFV
NADWAQIHFKGKKAYISTHFLMKTASQAKTTKQTAFYTPTPENGKAKQLSSGTEVTILGWGFSENGGFDFTWAFVDYGGV
KGYIHTKDLQMR
>Mature_172_residues
MKKKQVMLALTAAAGLGLTALHSAPAAKAAPLHDISVSMPSSDTYIIKAGKLNVRTEPNHEGDILGTVSSEQKVKVDRFV
NADWAQIHFKGKKAYISTHFLMKTASQAKTTKQTAFYTPTPENGKAKQLSSGTEVTILGWGFSENGGFDFTWAFVDYGGV
KGYIHTKDLQMR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YFHK_BACSU (O31579)

Other databases:

- EMBL:   D85082
- EMBL:   AL009126
- PIR:   D69801
- RefSeq:   NP_388737.1
- ProteinModelPortal:   O31579
- EnsemblBacteria:   EBBACT00000002200
- GeneID:   939215
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU08570
- NMPDR:   fig|224308.1.peg.856
- GenoList:   BSU08570
- GeneTree:   EBGT00050000000159
- HOGENOM:   HBG338654
- OMA:   ISTHFLM
- ProtClustDB:   CLSK886909
- BioCyc:   BSUB:BSU08570-MONOMER
- InterPro:   IPR003646
- InterPro:   IPR013247
- SMART:   SM00287

Pfam domain/function: PF08239 SH3_3

EC number: NA

Molecular weight: Translated: 18694; Mature: 18694

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKQVMLALTAAAGLGLTALHSAPAAKAAPLHDISVSMPSSDTYIIKAGKLNVRTEPNH
CCCCEEEEEEEECCCCCEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECEEEEEECCCC
EGDILGTVSSEQKVKVDRFVNADWAQIHFKGKKAYISTHFLMKTASQAKTTKQTAFYTPT
CCCEEEECCCCCEEEEEEECCCCEEEEEEECCEEEEEEEEEEHHHHHCCCCCCEEEECCC
PENGKAKQLSSGTEVTILGWGFSENGGFDFTWAFVDYGGVKGYIHTKDLQMR
CCCCCCEEECCCCEEEEEEECCCCCCCCEEEEEEEECCCEEEEEEECCEECC
>Mature Secondary Structure
MKKKQVMLALTAAAGLGLTALHSAPAAKAAPLHDISVSMPSSDTYIIKAGKLNVRTEPNH
CCCCEEEEEEEECCCCCEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECEEEEEECCCC
EGDILGTVSSEQKVKVDRFVNADWAQIHFKGKKAYISTHFLMKTASQAKTTKQTAFYTPT
CCCEEEECCCCCEEEEEEECCCCEEEEEEECCEEEEEEEEEEHHHHHCCCCCCEEEECCC
PENGKAKQLSSGTEVTILGWGFSENGGFDFTWAFVDYGGVKGYIHTKDLQMR
CCCCCCEEECCCCEEEEEEECCCCCCCCEEEEEEEECCCEEEEEEECCEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377