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The map label for this gene is yfhI

Identifier: 16077921

GI number: 16077921

Start: 926886

End: 928079

Strand: Direct

Name: yfhI

Synonym: BSU08540

Alternate gene names: 16077921

Gene position: 926886-928079 (Clockwise)

Preceding gene: 16077920

Following gene: 16077922

Centisome position: 21.99

GC content: 47.99

Gene sequence:

>1194_bases
TTGAGTATCAAAAACCCATCTGTAAAATTTATTATATTTGTTCTTATGATTTGTACATTTTCAATCGGCTATACAGAATA
CGCGGTGATGGGTATTTTGACGTCGATTGCCAATGACTTTCATATACAGGTTTCATCCGCAGGGCTTCTTGTCACGGCTT
ATGCGGCAAGCGTTTGTTTGACAGGGCCGCTCGTCACCATCATTTCCGTCAAGCTTCCGAGAAAGCCTGTGCTTCTTGGG
CTGATGGCGATATTTATCCTTTCCAACCTGATGAGCGCACTGGCGCCGAATTTTGCGGTATTGGCCATTTCAAGAATTTT
ATCTGCGTCCATTCACGGCGCTTTCTTCGCGATTGCCATGGTATTCGCAAGTGAAATGGTTCCGCCGGAAAAGCGTGCTG
CAGCTGCTGCTTCAATGAACGGCGGACTGACAGTGGCTCTAATGCTTGGTGTTCCATTCGGCTCTTATCTCGGAGATGTC
CTGAATTGGAGAGCGGTGTTTTCCATCATTACGGCACTTGGTGTCATCGGATTTTTAGGCCTTATGGCTGCCGTGCCGAA
CAGAAAACCAAAAGTGATCCCAATGCTTATGAATGAGTGGGGTGTTTTTAAACACAAACAAGTGCTGTTTTCCTTCGCGA
TTACCATTTTAGGCTATTCCGGTGTCTTTATCGCCTACACCTTTATCGAACCCATTTTGAGGCATTCAGCCGGATTCAGC
ACGGTTGGCATTACAGGTGCTCTCTTTGCGTATGGATTGGGAGGCGTTGCCGGGAATTTCTTTGCTGGAAAGGTACCGCT
GCCTTTGCTGACTCGGACGATGATCGGCGTAATGATCGGTTTAATCGGTGTTCTGGCTGTATTTCCTTACATCGCCATTT
ACCCGGCTGCAGCCATTGTGGCAACGTTCCTATTCGGGGCATGCGCATTCGGCACGCCGCCTCTTCTGCAAACAAAGGTC
ATTTCCTCATCTGAGGGCGGCACAACCATTGCCGCAGCTGTCAGCGTATCAGCATTTAACCTTGCCAATGCCCTTGGTGC
ATGGATCGGCGGAATGATTTTAAACGGAACAGGCTCTTATTCCTGGCTGTTTGCAGGAGGTGCGCTTATGACCGCATGCG
GACTTGTGCTTTCTACCTTCGCACACTTATCAGAAAAGAAGAGCGTCTACGAATATCAAGTCAATAAAGGGTAA

Upstream 100 bases:

>100_bases
CACATTTACACGAATTCTTAAAGAAAAAATCATTGAATTCACTTGAAAAATCTTTTAAGATGAAACTCGTTGTTTTTTAA
AATCAAAGGAGGCGATGACG

Downstream 100 bases:

>100_bases
AAAACAGCTGCAGTGTATGCAGCTGTTCTTCTTTACCGTTTGCCTGAGGCTCTCATTCTTTCTTGAGGATGCTGATTGAT
AGATCCGTCAGCACGCTTTG

Product: efflux transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MSIKNPSVKFIIFVLMICTFSIGYTEYAVMGILTSIANDFHIQVSSAGLLVTAYAASVCLTGPLVTIISVKLPRKPVLLG
LMAIFILSNLMSALAPNFAVLAISRILSASIHGAFFAIAMVFASEMVPPEKRAAAAASMNGGLTVALMLGVPFGSYLGDV
LNWRAVFSIITALGVIGFLGLMAAVPNRKPKVIPMLMNEWGVFKHKQVLFSFAITILGYSGVFIAYTFIEPILRHSAGFS
TVGITGALFAYGLGGVAGNFFAGKVPLPLLTRTMIGVMIGLIGVLAVFPYIAIYPAAAIVATFLFGACAFGTPPLLQTKV
ISSSEGGTTIAAAVSVSAFNLANALGAWIGGMILNGTGSYSWLFAGGALMTACGLVLSTFAHLSEKKSVYEYQVNKG

Sequences:

>Translated_397_residues
MSIKNPSVKFIIFVLMICTFSIGYTEYAVMGILTSIANDFHIQVSSAGLLVTAYAASVCLTGPLVTIISVKLPRKPVLLG
LMAIFILSNLMSALAPNFAVLAISRILSASIHGAFFAIAMVFASEMVPPEKRAAAAASMNGGLTVALMLGVPFGSYLGDV
LNWRAVFSIITALGVIGFLGLMAAVPNRKPKVIPMLMNEWGVFKHKQVLFSFAITILGYSGVFIAYTFIEPILRHSAGFS
TVGITGALFAYGLGGVAGNFFAGKVPLPLLTRTMIGVMIGLIGVLAVFPYIAIYPAAAIVATFLFGACAFGTPPLLQTKV
ISSSEGGTTIAAAVSVSAFNLANALGAWIGGMILNGTGSYSWLFAGGALMTACGLVLSTFAHLSEKKSVYEYQVNKG
>Mature_396_residues
SIKNPSVKFIIFVLMICTFSIGYTEYAVMGILTSIANDFHIQVSSAGLLVTAYAASVCLTGPLVTIISVKLPRKPVLLGL
MAIFILSNLMSALAPNFAVLAISRILSASIHGAFFAIAMVFASEMVPPEKRAAAAASMNGGLTVALMLGVPFGSYLGDVL
NWRAVFSIITALGVIGFLGLMAAVPNRKPKVIPMLMNEWGVFKHKQVLFSFAITILGYSGVFIAYTFIEPILRHSAGFST
VGITGALFAYGLGGVAGNFFAGKVPLPLLTRTMIGVMIGLIGVLAVFPYIAIYPAAAIVATFLFGACAFGTPPLLQTKVI
SSSEGGTTIAAAVSVSAFNLANALGAWIGGMILNGTGSYSWLFAGGALMTACGLVLSTFAHLSEKKSVYEYQVNKG

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily

Homologues:

Organism=Escherichia coli, GI1787947, Length=383, Percent_Identity=33.420365535248, Blast_Score=185, Evalue=4e-48,
Organism=Escherichia coli, GI1786595, Length=369, Percent_Identity=29.2682926829268, Blast_Score=155, Evalue=6e-39,
Organism=Escherichia coli, GI1787808, Length=235, Percent_Identity=31.063829787234, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI145693198, Length=381, Percent_Identity=25.4593175853018, Blast_Score=103, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YFHI_BACSU (O31577)

Other databases:

- EMBL:   D85082
- EMBL:   AL009126
- PIR:   B69801
- RefSeq:   NP_388735.1
- ProteinModelPortal:   O31577
- EnsemblBacteria:   EBBACT00000003699
- GeneID:   939712
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU08540
- GenoList:   BSU08540
- GeneTree:   EBGT00070000031875
- HOGENOM:   HBG732715
- OMA:   ITYIAPM
- PhylomeDB:   O31577
- ProtClustDB:   CLSK886908
- BioCyc:   BSUB:BSU08540-MONOMER
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196

Pfam domain/function: PF07690 MFS_1; SSF103473 MFS_gen_substrate_transporter

EC number: NA

Molecular weight: Translated: 41529; Mature: 41398

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xba48e68)-; HASH(0xd91fb78)-; HASH(0xd39fe4c)-; HASH(0xdcc3718)-; HASH(0xb34850c)-; HASH(0xdd3b5a4)-; HASH(0xb348668)-; HASH(0xdd2ddcc)-; HASH(0xd1e1340)-; HASH(0xbe72258)-; HASH(0xdba2e3c)-; HASH(0xd699548)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKNPSVKFIIFVLMICTFSIGYTEYAVMGILTSIANDFHIQVSSAGLLVTAYAASVCL
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHH
TGPLVTIISVKLPRKPVLLGLMAIFILSNLMSALAPNFAVLAISRILSASIHGAFFAIAM
HCHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
VFASEMVPPEKRAAAAASMNGGLTVALMLGVPFGSYLGDVLNWRAVFSIITALGVIGFLG
HHHHHCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMAAVPNRKPKVIPMLMNEWGVFKHKQVLFSFAITILGYSGVFIAYTFIEPILRHSAGFS
HHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
TVGITGALFAYGLGGVAGNFFAGKVPLPLLTRTMIGVMIGLIGVLAVFPYIAIYPAAAIV
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATFLFGACAFGTPPLLQTKVISSSEGGTTIAAAVSVSAFNLANALGAWIGGMILNGTGSY
HHHHHHHHHCCCCCCHHHHEECCCCCCCEEHHHHHHHHHHHHHHHHHHHCCEEECCCCCE
SWLFAGGALMTACGLVLSTFAHLSEKKSVYEYQVNKG
EHEEECHHHHHHHHHHHHHHHHHHHCCCHHEEECCCH
>Mature Secondary Structure 
SIKNPSVKFIIFVLMICTFSIGYTEYAVMGILTSIANDFHIQVSSAGLLVTAYAASVCL
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHH
TGPLVTIISVKLPRKPVLLGLMAIFILSNLMSALAPNFAVLAISRILSASIHGAFFAIAM
HCHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
VFASEMVPPEKRAAAAASMNGGLTVALMLGVPFGSYLGDVLNWRAVFSIITALGVIGFLG
HHHHHCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMAAVPNRKPKVIPMLMNEWGVFKHKQVLFSFAITILGYSGVFIAYTFIEPILRHSAGFS
HHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
TVGITGALFAYGLGGVAGNFFAGKVPLPLLTRTMIGVMIGLIGVLAVFPYIAIYPAAAIV
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATFLFGACAFGTPPLLQTKVISSSEGGTTIAAAVSVSAFNLANALGAWIGGMILNGTGSY
HHHHHHHHHCCCCCCHHHHEECCCCCCCEEHHHHHHHHHHHHHHHHHHHCCEEECCCCCE
SWLFAGGALMTACGLVLSTFAHLSEKKSVYEYQVNKG
EHEEECHHHHHHHHHHHHHHHHHHHCCCHHEEECCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377