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The map label for this gene is padR

Identifier: 16077901

GI number: 16077901

Start: 909198

End: 909746

Strand: Reverse

Name: padR

Synonym: BSU08340

Alternate gene names: 16077901

Gene position: 909746-909198 (Counterclockwise)

Preceding gene: 16077904

Following gene: 16077884

Centisome position: 21.58

GC content: 46.08

Gene sequence:

>549_bases
ATGAGAGTATTAAAATACGCCATATTAGGGCTTTTGCGAAAAGGCGAATTGAGTGGATACGATATTACGAGTTATTTTAA
AGAGGAGCTCGGCCAGTTTTGGAGCGCCAAGCACAGCCAGATTTACCCTGAGCTCAAAAAGCTGACGGATGAAGGATTTA
TCACGTTCCGGACAACGATTCAGGGCACAAAGCTGGAGAAAAAGATGTACACCCTGACAGACAGCGGAAAGCAGGAGCTG
CATGACTGGCTGATCCGCCACCAGCCGATACCCGAGACGGTGAAGGATGAATTTATGCTGAAGGCTTATTTCATTTCTTG
TCTATCGCGCCAGGAGGCTTCTGATTTGTTCAAAGACCAGCTGCAAAAACGCCAGGCCAAGCTTTCTGACTTACAGGGAA
GCTATGAAAAGCTTATGGCTTCAGCAGAGCCGATGTCATTTTCTTCACCGGACTTCGGCCACTATCTTGTGCTAACGAAA
GCGCTGGAGCGGGAGAAAAATTACGTTTCTTGGCTGGAATCAATTTTAGCTATGATAGATAAGGATTAA

Upstream 100 bases:

>100_bases
TCCCTTCCTCCCTTTTCTATAATAAGGGGAATAGGCAGTTAGAATCACAGTTGAGCACCGGCTCATCTGTTTTGCGAAAC
AGCCAGACACGGAGGATAGC

Downstream 100 bases:

>100_bases
CCGCAGTTCAGGCTGCACCCATACGAATGTACCCACATGCAAAAAAACATCTGCCTAAACGGCAGATGTTTTTTAGGCTC
GGAGCGCTTTCAGCCCCGCT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MRVLKYAILGLLRKGELSGYDITSYFKEELGQFWSAKHSQIYPELKKLTDEGFITFRTTIQGTKLEKKMYTLTDSGKQEL
HDWLIRHQPIPETVKDEFMLKAYFISCLSRQEASDLFKDQLQKRQAKLSDLQGSYEKLMASAEPMSFSSPDFGHYLVLTK
ALEREKNYVSWLESILAMIDKD

Sequences:

>Translated_182_residues
MRVLKYAILGLLRKGELSGYDITSYFKEELGQFWSAKHSQIYPELKKLTDEGFITFRTTIQGTKLEKKMYTLTDSGKQEL
HDWLIRHQPIPETVKDEFMLKAYFISCLSRQEASDLFKDQLQKRQAKLSDLQGSYEKLMASAEPMSFSSPDFGHYLVLTK
ALEREKNYVSWLESILAMIDKD
>Mature_182_residues
MRVLKYAILGLLRKGELSGYDITSYFKEELGQFWSAKHSQIYPELKKLTDEGFITFRTTIQGTKLEKKMYTLTDSGKQEL
HDWLIRHQPIPETVKDEFMLKAYFISCLSRQEASDLFKDQLQKRQAKLSDLQGSYEKLMASAEPMSFSSPDFGHYLVLTK
ALEREKNYVSWLESILAMIDKD

Specific function: Negative transcriptional regulator of padC phenolic acid decarboxylase

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PADR_BACSU (P94443)

Other databases:

- EMBL:   D78508
- EMBL:   AL009126
- PIR:   B69804
- RefSeq:   NP_388715.1
- HSSP:   Q9X399
- ProteinModelPortal:   P94443
- SMR:   P94443
- EnsemblBacteria:   EBBACT00000000511
- GeneID:   936174
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU08340
- NMPDR:   fig|224308.1.peg.834
- GenoList:   BSU08340
- GeneTree:   EBGT00050000001590
- HOGENOM:   HBG338645
- OMA:   EFWQANT
- ProtClustDB:   CLSK886896
- BioCyc:   BSUB:BSU08340-MONOMER
- GO:   GO:0005737
- GO:   GO:0006350
- InterPro:   IPR018309
- InterPro:   IPR005149
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF03551 PadR; PF10400 Vir_act_alpha_C

EC number: NA

Molecular weight: Translated: 21223; Mature: 21223

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLKYAILGLLRKGELSGYDITSYFKEELGQFWSAKHSQIYPELKKLTDEGFITFRTTI
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEC
QGTKLEKKMYTLTDSGKQELHDWLIRHQPIPETVKDEFMLKAYFISCLSRQEASDLFKDQ
CCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQKRQAKLSDLQGSYEKLMASAEPMSFSSPDFGHYLVLTKALEREKNYVSWLESILAMID
HHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
KD
CC
>Mature Secondary Structure
MRVLKYAILGLLRKGELSGYDITSYFKEELGQFWSAKHSQIYPELKKLTDEGFITFRTTI
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEC
QGTKLEKKMYTLTDSGKQELHDWLIRHQPIPETVKDEFMLKAYFISCLSRQEASDLFKDQ
CCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQKRQAKLSDLQGSYEKLMASAEPMSFSSPDFGHYLVLTKALEREKNYVSWLESILAMID
HHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
KD
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377