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The map label for this gene is yfjD

Identifier: 16077881

GI number: 16077881

Start: 886775

End: 887332

Strand: Reverse

Name: yfjD

Synonym: BSU08140

Alternate gene names: 16077881

Gene position: 887332-886775 (Counterclockwise)

Preceding gene: 16077882

Following gene: 16077880

Centisome position: 21.05

GC content: 39.61

Gene sequence:

>558_bases
TTGAAAAACCAAGAAATCATTGAAGTCAAAAGCAAAATGTTCCTGAGAATATGGGCTTTTGTCGGATCTGCCGGTATGGG
ATTAGCATGTTTGTGGCTCTTTTATATGGGTATTACGTTTCAAACGAAATATTACCTATTAGCCATTCCTGCTGGCTTTC
TGTTCACCTTGTTTTGTTTATATTTATTTATCATCTTCTTTCCGGCTTTCACCCCGCGGGGAAATACCATTTTCCGCATC
AAGACAGGAAAAAATGGAGAAGTGTTCACTGACAAAGTGTCTGTTACGTTTACTGATATCAAGAAAATTGAGATGAGCCG
CCATAAATTTAGTCTAAAAGGAATCTTCCAAGAAGATATATTGATCCAAACCGTGGATCAGAAGACCATTCGCATTCCCA
CTTGGAACATCATTCCGAATCCGTTGTTTTTCGAAGCGGTTGAACGCTATATCCTTCCACATCTGAATGAAGAGGCGAAA
AGCAATTGGATCGGACAGTTTACAGACATCCAACGCAGTGCGTATTTGAAGGAATTTGAGAATCATCCGAAGCTTTAG

Upstream 100 bases:

>100_bases
ATCACCCAGAATGAATTTTCTATCCTCCCTGCTCATAAGGATGTTGTAAATCAAATCATTTCAAAATGATAAGAATTGAA
TTAACAAAAGGAGAAAAGCA

Downstream 100 bases:

>100_bases
GGGCAGCACATGATTGAAGTAAAAAGCATGATGTTTCTAAGGGCTTGGCTGTTCCTCGCTACAGGGGGCGCCTTTATTGT
GGGAGTCTGGCTGGTGTCTG

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MKNQEIIEVKSKMFLRIWAFVGSAGMGLACLWLFYMGITFQTKYYLLAIPAGFLFTLFCLYLFIIFFPAFTPRGNTIFRI
KTGKNGEVFTDKVSVTFTDIKKIEMSRHKFSLKGIFQEDILIQTVDQKTIRIPTWNIIPNPLFFEAVERYILPHLNEEAK
SNWIGQFTDIQRSAYLKEFENHPKL

Sequences:

>Translated_185_residues
MKNQEIIEVKSKMFLRIWAFVGSAGMGLACLWLFYMGITFQTKYYLLAIPAGFLFTLFCLYLFIIFFPAFTPRGNTIFRI
KTGKNGEVFTDKVSVTFTDIKKIEMSRHKFSLKGIFQEDILIQTVDQKTIRIPTWNIIPNPLFFEAVERYILPHLNEEAK
SNWIGQFTDIQRSAYLKEFENHPKL
>Mature_185_residues
MKNQEIIEVKSKMFLRIWAFVGSAGMGLACLWLFYMGITFQTKYYLLAIPAGFLFTLFCLYLFIIFFPAFTPRGNTIFRI
KTGKNGEVFTDKVSVTFTDIKKIEMSRHKFSLKGIFQEDILIQTVDQKTIRIPTWNIIPNPLFFEAVERYILPHLNEEAK
SNWIGQFTDIQRSAYLKEFENHPKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yfjE

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YFJD_BACSU (O31555)

Other databases:

- EMBL:   AL009126
- PIR:   H69805
- RefSeq:   NP_388695.1
- EnsemblBacteria:   EBBACT00000001727
- GeneID:   936158
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU08140
- NMPDR:   fig|224308.1.peg.814
- GenoList:   BSU08140
- GeneTree:   EBGT00050000006307
- HOGENOM:   HBG344801
- ProtClustDB:   CLSK886882
- BioCyc:   BSUB:BSU08140-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21686; Mature: 21686

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc7e0514)-;

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNQEIIEVKSKMFLRIWAFVGSAGMGLACLWLFYMGITFQTKYYLLAIPAGFLFTLFCL
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHCCCCEEEEEECHHHHHHHHHH
YLFIIFFPAFTPRGNTIFRIKTGKNGEVFTDKVSVTFTDIKKIEMSRHKFSLKGIFQEDI
HHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHCCCHHHH
LIQTVDQKTIRIPTWNIIPNPLFFEAVERYILPHLNEEAKSNWIGQFTDIQRSAYLKEFE
EEEECCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHH
NHPKL
CCCCH
>Mature Secondary Structure
MKNQEIIEVKSKMFLRIWAFVGSAGMGLACLWLFYMGITFQTKYYLLAIPAGFLFTLFCL
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHCCCCEEEEEECHHHHHHHHHH
YLFIIFFPAFTPRGNTIFRIKTGKNGEVFTDKVSVTFTDIKKIEMSRHKFSLKGIFQEDI
HHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHCCCHHHH
LIQTVDQKTIRIPTWNIIPNPLFFEAVERYILPHLNEEAKSNWIGQFTDIQRSAYLKEFE
EEEECCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHH
NHPKL
CCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377