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The map label for this gene is yfjF

Identifier: 16077879

GI number: 16077879

Start: 885844

End: 886173

Strand: Reverse

Name: yfjF

Synonym: BSU08120

Alternate gene names: 16077879

Gene position: 886173-885844 (Counterclockwise)

Preceding gene: 16077880

Following gene: 16077867

Centisome position: 21.02

GC content: 51.82

Gene sequence:

>330_bases
ATGATGCTGATTACCATTCTTTTATTTCTCGCGGCAGGGCTTGCTGAAATTGGCGGCGGATATCTGGTTTGGCTATGGCT
GAGAGAGGCAAAGCCAGCTGGCTACGGAATCGCCGGGGCGCTGATCCTCATTGTATACGGCATTCTTCCGACGTTTCAGT
CCTTCCCATCTTTCGGCCGTGTATACGCCGCTTATGGCGGAGTATTCATCGTGCTTGCGGTCCTGTGGGGATGGCTTGTT
GACCGGAAAACACCTGATCTGTATGACTGGATCGGCGCATTCATTTGTCTCATCGGTGTCTGTGTTATTTTATTTGCGCC
GCGCGGATAA

Upstream 100 bases:

>100_bases
GTTCAGCGAAAAGCGTATTTGAAGGAATTTGAGAATCATCCGAAGCTTTAAAAGCTCTCCTCCTCTATAATGAAAGATAA
ATGCAAATTGAGGAGTGCTC

Downstream 100 bases:

>100_bases
CAAAATGGCCTGCTTATGAAGCGGGCCATTTTTGTTTAATCCTCTTTTAAGCTGTTCAGCTGCACTTCATGCTCCTCTTG
CGGTTCGTCAAGCGGATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MMLITILLFLAAGLAEIGGGYLVWLWLREAKPAGYGIAGALILIVYGILPTFQSFPSFGRVYAAYGGVFIVLAVLWGWLV
DRKTPDLYDWIGAFICLIGVCVILFAPRG

Sequences:

>Translated_109_residues
MMLITILLFLAAGLAEIGGGYLVWLWLREAKPAGYGIAGALILIVYGILPTFQSFPSFGRVYAAYGGVFIVLAVLWGWLV
DRKTPDLYDWIGAFICLIGVCVILFAPRG
>Mature_109_residues
MMLITILLFLAAGLAEIGGGYLVWLWLREAKPAGYGIAGALILIVYGILPTFQSFPSFGRVYAAYGGVFIVLAVLWGWLV
DRKTPDLYDWIGAFICLIGVCVILFAPRG

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family

Homologues:

Organism=Escherichia coli, GI1787865, Length=103, Percent_Identity=41.747572815534, Blast_Score=67, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YFJF_BACSU (O31553)

Other databases:

- EMBL:   AL009126
- PIR:   B69806
- RefSeq:   NP_388693.1
- EnsemblBacteria:   EBBACT00000001950
- GeneID:   939201
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU08120
- NMPDR:   fig|224308.1.peg.812
- GenoList:   BSU08120
- GeneTree:   EBGT00050000006272
- HOGENOM:   HBG313568
- OMA:   MAILWLW
- PhylomeDB:   O31553
- ProtClustDB:   PRK02237
- BioCyc:   BSUB:BSU08120-MONOMER
- HAMAP:   MF_00010
- InterPro:   IPR003844

Pfam domain/function: PF02694 UPF0060

EC number: NA

Molecular weight: Translated: 11886; Mature: 11886

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xdcd7f14)-; HASH(0xb159a30)-; HASH(0xc7a84e4)-; HASH(0xc58a458)-;

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLITILLFLAAGLAEIGGGYLVWLWLREAKPAGYGIAGALILIVYGILPTFQSFPSFGR
CHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
VYAAYGGVFIVLAVLWGWLVDRKTPDLYDWIGAFICLIGVCVILFAPRG
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure
MMLITILLFLAAGLAEIGGGYLVWLWLREAKPAGYGIAGALILIVYGILPTFQSFPSFGR
CHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
VYAAYGGVFIVLAVLWGWLVDRKTPDLYDWIGAFICLIGVCVILFAPRG
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377