Click here to switch to the map view.

The map label for this gene is yfmG

Identifier: 16077815

GI number: 16077815

Start: 820867

End: 822330

Strand: Direct

Name: yfmG

Synonym: BSU07480

Alternate gene names: 16077815

Gene position: 820867-822330 (Clockwise)

Preceding gene: 16077811

Following gene: 16077821

Centisome position: 19.47

GC content: 32.65

Gene sequence:

>1464_bases
TTGACTCTATTAATGCAAGATCATAAATCAATTTACAATAAAGATATAGAAATATTAATTGAAGTTGAAGAACTTATTAC
TTCTGTTCCAGAAAATAAAAAAAATGATTTTAAGAGTTTAATCGATAATAGAATTATGACTCTACTAAATAAAATTCAAC
ACCCTGTAGCAGCGGAAAATGTGTTTGGGATGTGTATTGCTTATCCGAATACTTACATAAGGTATAGATTAATTGATTTC
GTTGAAAAATGGGTACCTTATTTCTCTGCTGTAGAAACTATAATCAATCTAACCCAGGATCCGGATGATTTAGTTTCTTT
TAAAGCTATGGATGTCTGTGCAAATCATAAAATTGAAGAATCTGTAGCATATTTGTCTTCGATTATTGATGATGTCCGGG
AGAGTATAAGCTACCCTAAAAAACCTGTGGGATTAGGGGCCCAAAAAGTATTAAGTACATTATTAGATATATTCGGTGTT
GAAAAACATGAAGAGCTAGTAATGCTAAAAAATTATTTTGATCAAAATGGTATACTTCCTAATAACTTTGACTTTGAAGA
AAAAATTCCTCAAAGTCTAATAGAGGAATTCGAAAAAACAGAAGAAGATGGGATGATTTTAATTCCGGGTGGCTTTTTTG
AATTCGGTTTAAATGAAAATGAAATTCCTGACAAAACATTTAATTGGAAAGATGCTGTTCCTAGACAAAAAGTATGGTTA
CCTCCATTTTTTATCGATAAGTATCCTGTTACAAATAAAGATTATGATATCTTTACCGAGTTCATAGAGGAAAATGGGCA
TATATTCTGTCATCCTAATGAACCGCAGAATAAACAACATAGAAGAAATACATATTGGGATGATAGGTATTTAGATAATC
ATCCCGTTACAGGTATAGATTTTTATGATGCATTTGCTTACGCAAGATATAAGGGGAAAGAATTGCCAACCGAGTTTCAA
TGGGAAAAAGCTGCTCGAGGCGAAAAGGGTAATGTCTGGCCTTGGGGAGATAAATTTGATCCTGCAAAGGTTCAATATGC
TGGAAGTCTTTATAATGAACCCATTACTTCTTTAAAGTCCTGGAGAGAAAATTTATTAAAAGCTCATGCTGATAAAGAAT
TAAATCATTTAACAAGTGATATTTTTGAACAAAATGGTGAAAGTCCCTATGGAGTATGCGGTATGATCGGCGGAACATGG
GAGTGGACTAGAAGTGAGCTTAAAACAAAGAGAGCTTTCCACCCTATTTTTGAGAATGTACCATTTAATAGTGTTAACTC
ATTTGCCGTTCTTAAAGGAGGATCATTCTTCTCTCATCCAGGCTTAATGTTCCCTTCTTTTAGAGCAAAAGATATTCCTT
TCTGTCGACACAATGAAATGGGGATTAGATGCGTAAAGAATATTCCAGTATATAAAATTAGAGAATCAATTAATGGGCCA
ATTACTAATAAAGCAATTTATTAA

Upstream 100 bases:

>100_bases
TAGCCCGGTTCTTTATACTAATGAAAAATGGTAAACACTTAGGGAATAGCATTTAATGCTATTCCTTATTTCAACAAACA
AATCGGGAGGTTATCGTAAT

Downstream 100 bases:

>100_bases
TCATTCTAGGTTAGAGACTTGATAAAAGTATACTAACATTGTGTAGTAATGTTCAGCTTGTAGAAAAAACAATGTTTTTT
CTACAAGATTTTATTTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 487; Mature: 486

Protein sequence:

>487_residues
MTLLMQDHKSIYNKDIEILIEVEELITSVPENKKNDFKSLIDNRIMTLLNKIQHPVAAENVFGMCIAYPNTYIRYRLIDF
VEKWVPYFSAVETIINLTQDPDDLVSFKAMDVCANHKIEESVAYLSSIIDDVRESISYPKKPVGLGAQKVLSTLLDIFGV
EKHEELVMLKNYFDQNGILPNNFDFEEKIPQSLIEEFEKTEEDGMILIPGGFFEFGLNENEIPDKTFNWKDAVPRQKVWL
PPFFIDKYPVTNKDYDIFTEFIEENGHIFCHPNEPQNKQHRRNTYWDDRYLDNHPVTGIDFYDAFAYARYKGKELPTEFQ
WEKAARGEKGNVWPWGDKFDPAKVQYAGSLYNEPITSLKSWRENLLKAHADKELNHLTSDIFEQNGESPYGVCGMIGGTW
EWTRSELKTKRAFHPIFENVPFNSVNSFAVLKGGSFFSHPGLMFPSFRAKDIPFCRHNEMGIRCVKNIPVYKIRESINGP
ITNKAIY

Sequences:

>Translated_487_residues
MTLLMQDHKSIYNKDIEILIEVEELITSVPENKKNDFKSLIDNRIMTLLNKIQHPVAAENVFGMCIAYPNTYIRYRLIDF
VEKWVPYFSAVETIINLTQDPDDLVSFKAMDVCANHKIEESVAYLSSIIDDVRESISYPKKPVGLGAQKVLSTLLDIFGV
EKHEELVMLKNYFDQNGILPNNFDFEEKIPQSLIEEFEKTEEDGMILIPGGFFEFGLNENEIPDKTFNWKDAVPRQKVWL
PPFFIDKYPVTNKDYDIFTEFIEENGHIFCHPNEPQNKQHRRNTYWDDRYLDNHPVTGIDFYDAFAYARYKGKELPTEFQ
WEKAARGEKGNVWPWGDKFDPAKVQYAGSLYNEPITSLKSWRENLLKAHADKELNHLTSDIFEQNGESPYGVCGMIGGTW
EWTRSELKTKRAFHPIFENVPFNSVNSFAVLKGGSFFSHPGLMFPSFRAKDIPFCRHNEMGIRCVKNIPVYKIRESINGP
ITNKAIY
>Mature_486_residues
TLLMQDHKSIYNKDIEILIEVEELITSVPENKKNDFKSLIDNRIMTLLNKIQHPVAAENVFGMCIAYPNTYIRYRLIDFV
EKWVPYFSAVETIINLTQDPDDLVSFKAMDVCANHKIEESVAYLSSIIDDVRESISYPKKPVGLGAQKVLSTLLDIFGVE
KHEELVMLKNYFDQNGILPNNFDFEEKIPQSLIEEFEKTEEDGMILIPGGFFEFGLNENEIPDKTFNWKDAVPRQKVWLP
PFFIDKYPVTNKDYDIFTEFIEENGHIFCHPNEPQNKQHRRNTYWDDRYLDNHPVTGIDFYDAFAYARYKGKELPTEFQW
EKAARGEKGNVWPWGDKFDPAKVQYAGSLYNEPITSLKSWRENLLKAHADKELNHLTSDIFEQNGESPYGVCGMIGGTWE
WTRSELKTKRAFHPIFENVPFNSVNSFAVLKGGSFFSHPGLMFPSFRAKDIPFCRHNEMGIRCVKNIPVYKIRESINGPI
TNKAIY

Specific function: Unknown

COG id: COG1262

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI257470975, Length=283, Percent_Identity=27.5618374558304, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI38202250, Length=297, Percent_Identity=24.9158249158249, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI194248087, Length=291, Percent_Identity=25.4295532646048, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI194248088, Length=302, Percent_Identity=25.8278145695364, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI257470977, Length=230, Percent_Identity=26.9565217391304, Blast_Score=70, Evalue=6e-12,
Organism=Drosophila melanogaster, GI20130397, Length=299, Percent_Identity=27.0903010033445, Blast_Score=82, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YFMG_BACSU (O34722)

Other databases:

- EMBL:   D86417
- EMBL:   AL009126
- PIR:   F69812
- RefSeq:   NP_388629.1
- HSSP:   Q8NBJ7
- ProteinModelPortal:   O34722
- SMR:   O34722
- EnsemblBacteria:   EBBACT00000002502
- GeneID:   938798
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU07480
- NMPDR:   fig|224308.1.peg.748
- GenoList:   BSU07480
- GeneTree:   EBGT00050000005172
- BioCyc:   BSUB:BSU07480-MONOMER
- GO:   GO:0005488
- InterPro:   IPR016187
- InterPro:   IPR005532
- Gene3D:   G3DSA:3.90.1580.10

Pfam domain/function: PF03781 DUF323; SSF56436 C-type_lectin_fold

EC number: NA

Molecular weight: Translated: 56543; Mature: 56412

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLMQDHKSIYNKDIEILIEVEELITSVPENKKNDFKSLIDNRIMTLLNKIQHPVAAEN
CCEEEHHHHHHHCCCHHEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
VFGMCIAYPNTYIRYRLIDFVEKWVPYFSAVETIINLTQDPDDLVSFKAMDVCANHKIEE
HHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHH
SVAYLSSIIDDVRESISYPKKPVGLGAQKVLSTLLDIFGVEKHEELVMLKNYFDQNGILP
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
NNFDFEEKIPQSLIEEFEKTEEDGMILIPGGFFEFGLNENEIPDKTFNWKDAVPRQKVWL
CCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCEEECCCCCCCCCCCCCHHHCCCCCCCCC
PPFFIDKYPVTNKDYDIFTEFIEENGHIFCHPNEPQNKQHRRNTYWDDRYLDNHPVTGID
CCHHCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCH
FYDAFAYARYKGKELPTEFQWEKAARGEKGNVWPWGDKFDPAKVQYAGSLYNEPITSLKS
HHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHEECHHHHHHHHHHHHH
WRENLLKAHADKELNHLTSDIFEQNGESPYGVCGMIGGTWEWTRSELKTKRAFHPIFENV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PFNSVNSFAVLKGGSFFSHPGLMFPSFRAKDIPFCRHNEMGIRCVKNIPVYKIRESINGP
CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCC
ITNKAIY
CCCCCCC
>Mature Secondary Structure 
TLLMQDHKSIYNKDIEILIEVEELITSVPENKKNDFKSLIDNRIMTLLNKIQHPVAAEN
CEEEHHHHHHHCCCHHEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
VFGMCIAYPNTYIRYRLIDFVEKWVPYFSAVETIINLTQDPDDLVSFKAMDVCANHKIEE
HHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHH
SVAYLSSIIDDVRESISYPKKPVGLGAQKVLSTLLDIFGVEKHEELVMLKNYFDQNGILP
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
NNFDFEEKIPQSLIEEFEKTEEDGMILIPGGFFEFGLNENEIPDKTFNWKDAVPRQKVWL
CCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCEEECCCCCCCCCCCCCHHHCCCCCCCCC
PPFFIDKYPVTNKDYDIFTEFIEENGHIFCHPNEPQNKQHRRNTYWDDRYLDNHPVTGID
CCHHCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCH
FYDAFAYARYKGKELPTEFQWEKAARGEKGNVWPWGDKFDPAKVQYAGSLYNEPITSLKS
HHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHEECHHHHHHHHHHHHH
WRENLLKAHADKELNHLTSDIFEQNGESPYGVCGMIGGTWEWTRSELKTKRAFHPIFENV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PFNSVNSFAVLKGGSFFSHPGLMFPSFRAKDIPFCRHNEMGIRCVKNIPVYKIRESINGP
CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCC
ITNKAIY
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377