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The map label for this gene is yczC

Identifier: 16077340

GI number: 16077340

Start: 292881

End: 293264

Strand: Reverse

Name: yczC

Synonym: BSU02710

Alternate gene names: 16077340

Gene position: 293264-292881 (Counterclockwise)

Preceding gene: 16077342

Following gene: 16077337

Centisome position: 6.96

GC content: 47.14

Gene sequence:

>384_bases
TTGGAACTAGCTGGTTTCATGCTGCGCGCCTGCGCTCTTTTACTTGATGTAATCATTGCCGCAGCAGTGATTTTGGCAGC
CGGATTTACGTTTGGCGATGGGTCCGCCGGTGTCATTATTGTCGCCATATTGATGCTGATTGTGTACCCTTTGCTGATGC
CGCTGACAAATTGGAAGGGCACACTGGGCAAAAAAATCATCGGGCTGCAAATCGTGAGGGACGAAACATATAAAAAAATA
TCCTTCCCGCAAGCCATTGTCCGTTACCTGATAGCGTGGGTGCATGTGTTCTCCCGCCTGATCTATTTGACTGCCGCATT
TACGAAGAAAAAACAAACCGTTCATGATATGGCTGCGAAAACCATTGTGCTGAAAGCAGAATAA

Upstream 100 bases:

>100_bases
ACCAACTTTTGTGATTTAAGGCTTATCACCTATTCCCACTTTAGGCCCTTCTTTTTTACAATCATTAGGTGTTTATTTAA
CATTTTAAGGAGTGTTTCTA

Downstream 100 bases:

>100_bases
CCTTGAAGAATAGCATTCTTCAAGGTTTTGTTTTTCATTAATTCGTATTCTGGCCCCCGCCGTTCAGCCCTTCTTTAATC
AGGCTGTTGACTTGGCTGCT

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MELAGFMLRACALLLDVIIAAAVILAAGFTFGDGSAGVIIVAILMLIVYPLLMPLTNWKGTLGKKIIGLQIVRDETYKKI
SFPQAIVRYLIAWVHVFSRLIYLTAAFTKKKQTVHDMAAKTIVLKAE

Sequences:

>Translated_127_residues
MELAGFMLRACALLLDVIIAAAVILAAGFTFGDGSAGVIIVAILMLIVYPLLMPLTNWKGTLGKKIIGLQIVRDETYKKI
SFPQAIVRYLIAWVHVFSRLIYLTAAFTKKKQTVHDMAAKTIVLKAE
>Mature_127_residues
MELAGFMLRACALLLDVIIAAAVILAAGFTFGDGSAGVIIVAILMLIVYPLLMPLTNWKGTLGKKIIGLQIVRDETYKKI
SFPQAIVRYLIAWVHVFSRLIYLTAAFTKKKQTVHDMAAKTIVLKAE

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCZC_BACSU (O31469)

Other databases:

- EMBL:   AL009126
- PIR:   B69767
- RefSeq:   NP_388153.1
- EnsemblBacteria:   EBBACT00000000344
- GeneID:   938390
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU02710
- NMPDR:   fig|224308.1.peg.272
- GenoList:   BSU02710
- GeneTree:   EBGT00050000001361
- HOGENOM:   HBG344749
- OMA:   AIFRIRI
- ProtClustDB:   CLSK237708
- BioCyc:   BSUB:BSU02710-MONOMER
- InterPro:   IPR010432

Pfam domain/function: PF06271 RDD

EC number: NA

Molecular weight: Translated: 13950; Mature: 13950

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc37528c)-; HASH(0xb0cc074)-; HASH(0xb1a0b54)-;

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELAGFMLRACALLLDVIIAAAVILAAGFTFGDGSAGVIIVAILMLIVYPLLMPLTNWKG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCH
TLGKKIIGLQIVRDETYKKISFPQAIVRYLIAWVHVFSRLIYLTAAFTKKKQTVHDMAAK
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIVLKAE
HHEEECH
>Mature Secondary Structure
MELAGFMLRACALLLDVIIAAAVILAAGFTFGDGSAGVIIVAILMLIVYPLLMPLTNWKG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCH
TLGKKIIGLQIVRDETYKKISFPQAIVRYLIAWVHVFSRLIYLTAAFTKKKQTVHDMAAK
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIVLKAE
HHEEECH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377