| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901505
Identifier: 159901505
GI number: 159901505
Start: 6332762
End: 6335176
Strand: Reverse
Name: 159901505
Synonym: Haur_4994
Alternate gene names: NA
Gene position: 6335176-6332762 (Counterclockwise)
Preceding gene: 159901506
Following gene: 159901485
Centisome position: 99.82
GC content: 51.88
Gene sequence:
>2415_bases ATGAGACGAGTTTTTTGTTGGTTAGGATGTTTATTAATTGGATTAAGCTTCGTGCCGAGCCATACCAGCACGGTTGCGGC CACGTATCAAGTGCAAGCCGAGTTTCAACAATTTTGGCAGGCGAACGGCGGCGCAGCAATCTTTGGTCAACCAATAAGCG AAGCGCTGTGGTTCGATAGTCAGTTGGTACAATATTTCGAAAACCAACGCTTGCACTTGGTCAACAATCAAGTTGTGCCC GCCAAGCTTGGGCTAGAGCTATTTCAGGCCAGCCGCCGAACCTGGCAAAACCAACGCCAACATCTGCCAACTAGCCAGTG TTTGCGGGTTGAAACAACCGAACGCTCAATCTGCGAGCCGTTTCGTCGCTACTGGCAAGCCAATGGCGAGGCCAGTCGTT TGGGCAACCCCATCACTGAAACGGTCAGCGAGACTAATCCATTAACTGGTCAGCAACAAATTATGCAATATTTTGAGCAG CAATTGCTGATCAGCACCAACCAACAAATTATGCTCAGCCCACTTGGACGGTGGCAGGCCGATTGGCTGCTGAATGGCAC ACGCCAAGCCAGCCCAATTCGTGCCAATTTAACTGGCCCAAGCCAACCACTCAAGCCACTCGACCAATTTGAAATTCAAA TTGATGCTGGCAACTATAACGGCGCAGCCAACCTACGCATCTTTGATAGTGCTGGCCAACTTGAAACCAGCCAAACCCTA AACCTCACAGGCCAAAGCCAAACCCTCGCATTCCAAGCCCAAGGCGCGTTAGGCCAGCATTACGCCGTCTTATTGATCGA TGGCAAGGTGGCGGCGATCAACAGCAGCATCTATCAACTTGAGGCGACCACCAGCCTTCAAACTGGAGTTGCGGCCTACG ATACGCTGCCCAACAAAGTGCGTAGCTTTTTGCGCAACGACCTATCGATCTATCAATATCAAGGCTACACGATTCGCGGC TATCGTTCGCCCGATAGCTACCTGATTTGGCTGCGTGATCATGTTCATCAAGGCTTGGGCTATCGCTATTTTGAGCAAGA TATGACCAGCACGCTAGATTATTTTCGGCGTGAGCAAAAGCCCAATGGAGCCTTCGACGACTATTTTGCAATGCTTGGCG GCGCACCAGTCCAAGGCCGTACCGCTGTCGAGGCTGATTTAGAATATTTATTTGTGCAGGGCGTGCATCAAGCCTGGCAA GCCACTGGCGATACTAGTTGGATGCTTGAGCAAAAACCTGCCATGCTACGCGGCATCAACTATAGCCTGAGCGATCCACA GCGCTGGAATCCCACCCTGCGTCTAATTCGCCGCCCCTATACGATTGACACATGGGATTTTGAATATGGTGGGCCGACGA TTGCCCCTGATGGCAAAACCTCGCCACGCCATTGGATCGACGAAAAAACCCGCTTTGGAATTATGCACGGCGATAATACG GGCATGGCTCATGGCTTGTATTTGCTGAGCAAACTTGAACTAACTCAAGCAAATTTTGAGCAAGCTACTCAATGGCTGGT TCGTTCGCAACAACTAACCAAGCAGCTGAATCAGGTTGCGTGGAACGGCAAATTCTACACCCACAATGTTTTAGAGCAGC CTTTCGATATTCCTGAACTCGATGAGGCTCGCCAACTGTCGCTCTCCAACTCGTATGCGCTCAATCGCTATGGCATGGAA GCCAGCAAGGCCTTGGCAATCATCGACGAATATTATCAGCGGCGGGTGGCTGATTCTAGCAGTCTTTCCTCAGAATGGTT CAGCATCGACCCGCCATTTCCTGCCGAGAGTTTTGGCACATTGCCAGGCTGGGGCAACGTGCCTGGCGAATATGTTAATG GTGGGCGGATGCCGCTAGTTGGCGGCGAATTAGCTCGTGGCGCATTTCGTTGGGGCCAGCCAGCCTATGGCTTTGATATT CTGCGCCGCTATGCCCAAATGATTGAAGCCCAAGGCGGCAGCTATTTGTGGTATTACCCGGTCGGCAACCCTGGTATCTC TGGCCCCGACACCCTCGCCACCGACGGCTGGGGCAGCACGGCAATGCTGGCAGCGCTAATCGAAGGCGCAGCCGGGGTGA CCGATCAAAGTGCGTTGTATCAGCATGCAGTGCTCAGCCCACGTTGGATTGTTGAGCCAGATGTGCAACAAGCCCAGGTC ACCACCCGCTATGCTGCTTCGCAAGGCTATATGAGCTATCGCTGGCAACGCCAAGCTCGTGGTTTTCAGCTTGATTTTAC CGGCAGCGCTGAACAAGTCACATTGCAATTATTGCTACCCAACGATGCTCCACAACACGTTAATTTAACGATCAATGGGT TACCATCATTCGGCCATGAACGCACAATCGGCCAAAGTCGCTACCTTGAACTGCGGCTAAACAAGGCCACTGGTTCGATT ATGGTCAATTGGTAG
Upstream 100 bases:
>100_bases GGCATGTTGGAACTAGGTATTAACTCAATAAGCCAGTACACATAATGTACAGGCTACTGGTAGTTGTTGCCAGTAGCCAG CAAATTCATGGAAGGTATGG
Downstream 100 bases:
>100_bases CACGAAAAACCGCCTTAATCGGCTGATGATCAAGGCGGTTTTTAAGCTTATTGATTATTGAGGAATTGATTGTTTGAGGG TTTGCAATTGCTCAAACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: SCP-Like Extracellular; Peptidase S8/S53 Subtilisin Kexin Sedolisin
Number of amino acids: Translated: 804; Mature: 804
Protein sequence:
>804_residues MRRVFCWLGCLLIGLSFVPSHTSTVAATYQVQAEFQQFWQANGGAAIFGQPISEALWFDSQLVQYFENQRLHLVNNQVVP AKLGLELFQASRRTWQNQRQHLPTSQCLRVETTERSICEPFRRYWQANGEASRLGNPITETVSETNPLTGQQQIMQYFEQ QLLISTNQQIMLSPLGRWQADWLLNGTRQASPIRANLTGPSQPLKPLDQFEIQIDAGNYNGAANLRIFDSAGQLETSQTL NLTGQSQTLAFQAQGALGQHYAVLLIDGKVAAINSSIYQLEATTSLQTGVAAYDTLPNKVRSFLRNDLSIYQYQGYTIRG YRSPDSYLIWLRDHVHQGLGYRYFEQDMTSTLDYFRREQKPNGAFDDYFAMLGGAPVQGRTAVEADLEYLFVQGVHQAWQ ATGDTSWMLEQKPAMLRGINYSLSDPQRWNPTLRLIRRPYTIDTWDFEYGGPTIAPDGKTSPRHWIDEKTRFGIMHGDNT GMAHGLYLLSKLELTQANFEQATQWLVRSQQLTKQLNQVAWNGKFYTHNVLEQPFDIPELDEARQLSLSNSYALNRYGME ASKALAIIDEYYQRRVADSSSLSSEWFSIDPPFPAESFGTLPGWGNVPGEYVNGGRMPLVGGELARGAFRWGQPAYGFDI LRRYAQMIEAQGGSYLWYYPVGNPGISGPDTLATDGWGSTAMLAALIEGAAGVTDQSALYQHAVLSPRWIVEPDVQQAQV TTRYAASQGYMSYRWQRQARGFQLDFTGSAEQVTLQLLLPNDAPQHVNLTINGLPSFGHERTIGQSRYLELRLNKATGSI MVNW
Sequences:
>Translated_804_residues MRRVFCWLGCLLIGLSFVPSHTSTVAATYQVQAEFQQFWQANGGAAIFGQPISEALWFDSQLVQYFENQRLHLVNNQVVP AKLGLELFQASRRTWQNQRQHLPTSQCLRVETTERSICEPFRRYWQANGEASRLGNPITETVSETNPLTGQQQIMQYFEQ QLLISTNQQIMLSPLGRWQADWLLNGTRQASPIRANLTGPSQPLKPLDQFEIQIDAGNYNGAANLRIFDSAGQLETSQTL NLTGQSQTLAFQAQGALGQHYAVLLIDGKVAAINSSIYQLEATTSLQTGVAAYDTLPNKVRSFLRNDLSIYQYQGYTIRG YRSPDSYLIWLRDHVHQGLGYRYFEQDMTSTLDYFRREQKPNGAFDDYFAMLGGAPVQGRTAVEADLEYLFVQGVHQAWQ ATGDTSWMLEQKPAMLRGINYSLSDPQRWNPTLRLIRRPYTIDTWDFEYGGPTIAPDGKTSPRHWIDEKTRFGIMHGDNT GMAHGLYLLSKLELTQANFEQATQWLVRSQQLTKQLNQVAWNGKFYTHNVLEQPFDIPELDEARQLSLSNSYALNRYGME ASKALAIIDEYYQRRVADSSSLSSEWFSIDPPFPAESFGTLPGWGNVPGEYVNGGRMPLVGGELARGAFRWGQPAYGFDI LRRYAQMIEAQGGSYLWYYPVGNPGISGPDTLATDGWGSTAMLAALIEGAAGVTDQSALYQHAVLSPRWIVEPDVQQAQV TTRYAASQGYMSYRWQRQARGFQLDFTGSAEQVTLQLLLPNDAPQHVNLTINGLPSFGHERTIGQSRYLELRLNKATGSI MVNW >Mature_804_residues MRRVFCWLGCLLIGLSFVPSHTSTVAATYQVQAEFQQFWQANGGAAIFGQPISEALWFDSQLVQYFENQRLHLVNNQVVP AKLGLELFQASRRTWQNQRQHLPTSQCLRVETTERSICEPFRRYWQANGEASRLGNPITETVSETNPLTGQQQIMQYFEQ QLLISTNQQIMLSPLGRWQADWLLNGTRQASPIRANLTGPSQPLKPLDQFEIQIDAGNYNGAANLRIFDSAGQLETSQTL NLTGQSQTLAFQAQGALGQHYAVLLIDGKVAAINSSIYQLEATTSLQTGVAAYDTLPNKVRSFLRNDLSIYQYQGYTIRG YRSPDSYLIWLRDHVHQGLGYRYFEQDMTSTLDYFRREQKPNGAFDDYFAMLGGAPVQGRTAVEADLEYLFVQGVHQAWQ ATGDTSWMLEQKPAMLRGINYSLSDPQRWNPTLRLIRRPYTIDTWDFEYGGPTIAPDGKTSPRHWIDEKTRFGIMHGDNT GMAHGLYLLSKLELTQANFEQATQWLVRSQQLTKQLNQVAWNGKFYTHNVLEQPFDIPELDEARQLSLSNSYALNRYGME ASKALAIIDEYYQRRVADSSSLSSEWFSIDPPFPAESFGTLPGWGNVPGEYVNGGRMPLVGGELARGAFRWGQPAYGFDI LRRYAQMIEAQGGSYLWYYPVGNPGISGPDTLATDGWGSTAMLAALIEGAAGVTDQSALYQHAVLSPRWIVEPDVQQAQV TTRYAASQGYMSYRWQRQARGFQLDFTGSAEQVTLQLLLPNDAPQHVNLTINGLPSFGHERTIGQSRYLELRLNKATGSI MVNW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90659; Mature: 90659
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVFCWLGCLLIGLSFVPSHTSTVAATYQVQAEFQQFWQANGGAAIFGQPISEALWFDS CCHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHCCCCEEEECCCHHHHHHHHH QLVQYFENQRLHLVNNQVVPAKLGLELFQASRRTWQNQRQHLPTSQCLRVETTERSICEP HHHHHHHCCCEEEECCEECHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCHHHHHHH FRRYWQANGEASRLGNPITETVSETNPLTGQQQIMQYFEQQLLISTNQQIMLSPLGRWQA HHHHHHCCCCHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCC DWLLNGTRQASPIRANLTGPSQPLKPLDQFEIQIDAGNYNGAANLRIFDSAGQLETSQTL HHEECCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCEE NLTGQSQTLAFQAQGALGQHYAVLLIDGKVAAINSSIYQLEATTSLQTGVAAYDTLPNKV EECCCCEEEEEEECCCCCCCEEEEEECCEEEEECCCEEEEEECCHHHCCHHHHHCCHHHH RSFLRNDLSIYQYQGYTIRGYRSPDSYLIWLRDHVHQGLGYRYFEQDMTSTLDYFRREQK HHHHHCCCEEEEECCEEEEEECCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCC PNGAFDDYFAMLGGAPVQGRTAVEADLEYLFVQGVHQAWQATGDTSWMLEQKPAMLRGIN CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHCCC YSLSDPQRWNPTLRLIRRPYTIDTWDFEYGGPTIAPDGKTSPRHWIDEKTRFGIMHGDNT CCCCCCCCCCHHHHHHCCCCEECCCCCCCCCCEECCCCCCCCHHHCCCCCEEEEEECCCC GMAHGLYLLSKLELTQANFEQATQWLVRSQQLTKQLNQVAWNGKFYTHNVLEQPFDIPEL CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHCCCCCCCC DEARQLSLSNSYALNRYGMEASKALAIIDEYYQRRVADSSSLSSEWFSIDPPFPAESFGT CCHHHHCCCCCEEEHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHCCC LPGWGNVPGEYVNGGRMPLVGGELARGAFRWGQPAYGFDILRRYAQMIEAQGGSYLWYYP CCCCCCCCHHHCCCCCCEECCCHHHHCHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE VGNPGISGPDTLATDGWGSTAMLAALIEGAAGVTDQSALYQHAVLSPRWIVEPDVQQAQV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEECCCCHHHHH TTRYAASQGYMSYRWQRQARGFQLDFTGSAEQVTLQLLLPNDAPQHVNLTINGLPSFGHE HHHHHHHCCCHHHHHHHHCCCEEEEECCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCC RTIGQSRYLELRLNKATGSIMVNW CCCCCCEEEEEEEECCCCCEEEEC >Mature Secondary Structure MRRVFCWLGCLLIGLSFVPSHTSTVAATYQVQAEFQQFWQANGGAAIFGQPISEALWFDS CCHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHCCCCEEEECCCHHHHHHHHH QLVQYFENQRLHLVNNQVVPAKLGLELFQASRRTWQNQRQHLPTSQCLRVETTERSICEP HHHHHHHCCCEEEECCEECHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCHHHHHHH FRRYWQANGEASRLGNPITETVSETNPLTGQQQIMQYFEQQLLISTNQQIMLSPLGRWQA HHHHHHCCCCHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCC DWLLNGTRQASPIRANLTGPSQPLKPLDQFEIQIDAGNYNGAANLRIFDSAGQLETSQTL HHEECCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCEE NLTGQSQTLAFQAQGALGQHYAVLLIDGKVAAINSSIYQLEATTSLQTGVAAYDTLPNKV EECCCCEEEEEEECCCCCCCEEEEEECCEEEEECCCEEEEEECCHHHCCHHHHHCCHHHH RSFLRNDLSIYQYQGYTIRGYRSPDSYLIWLRDHVHQGLGYRYFEQDMTSTLDYFRREQK HHHHHCCCEEEEECCEEEEEECCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCC PNGAFDDYFAMLGGAPVQGRTAVEADLEYLFVQGVHQAWQATGDTSWMLEQKPAMLRGIN CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHCCC YSLSDPQRWNPTLRLIRRPYTIDTWDFEYGGPTIAPDGKTSPRHWIDEKTRFGIMHGDNT CCCCCCCCCCHHHHHHCCCCEECCCCCCCCCCEECCCCCCCCHHHCCCCCEEEEEECCCC GMAHGLYLLSKLELTQANFEQATQWLVRSQQLTKQLNQVAWNGKFYTHNVLEQPFDIPEL CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHCCCCCCCC DEARQLSLSNSYALNRYGMEASKALAIIDEYYQRRVADSSSLSSEWFSIDPPFPAESFGT CCHHHHCCCCCEEEHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHCCC LPGWGNVPGEYVNGGRMPLVGGELARGAFRWGQPAYGFDILRRYAQMIEAQGGSYLWYYP CCCCCCCCHHHCCCCCCEECCCHHHHCHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE VGNPGISGPDTLATDGWGSTAMLAALIEGAAGVTDQSALYQHAVLSPRWIVEPDVQQAQV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEECCCCHHHHH TTRYAASQGYMSYRWQRQARGFQLDFTGSAEQVTLQLLLPNDAPQHVNLTINGLPSFGHE HHHHHHHCCCHHHHHHHHCCCEEEEECCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCC RTIGQSRYLELRLNKATGSIMVNW CCCCCCEEEEEEEECCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA