Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901483

Identifier: 159901483

GI number: 159901483

Start: 6309346

End: 6310185

Strand: Direct

Name: 159901483

Synonym: Haur_4972

Alternate gene names: NA

Gene position: 6309346-6310185 (Clockwise)

Preceding gene: 159901481

Following gene: 159901486

Centisome position: 99.41

GC content: 49.05

Gene sequence:

>840_bases
ATGACTAAGCCCGACGACTTAACTGATATAGTAGCTGATTTGAATCAACAACAGTGCTGGAATTTAGATGGGGCGGGATG
CCAGCTTCTTTGCCAGCGCAGTTGTGAAATCTTGCAACGCAACCCAATCCCCAACCCTGCCAAATTTGCTGATGTGGTGG
TTAATGTCTATCATGATTATGCCACGGTCGCCGCCGCCTGCGATCCACAACATCCTAGTCATGAACTGATTTGGGTCTCG
ATTATGGATGAGATTTTGAGCTGGTATCGTTGCAAGCGCTTTTCGCTGGGCAATGGTTCGCAATTGTGTGAGCATTCACC
AGATTTAGTGGCCTACGAAAATGTCAAACGTTCGCTGCCCCAATTTCGCTTTGAAGCCCGCTTGCGCAGCTATATTCACA
CGATCGCTGATCGGGCGATTATTCATTGGTGGCGAGCCAAGGATGCCAAAAAACATGGTGGCAGTGGCGGACGCAGAATC
CACGAAAGTAGCAATGTTTATACGCCCAAGCCCCAAGATCAAACCTATTACCTGAGCCAAAGCCATGGGCGTGATCATCA
ACGTGAATTAGGCGACACGATTGCTTCGCCTGATCTTTCACCCGATGAGCATGTTGAGCGCTGTGAACTTCAACGGCACA
TGGCAGCTGAAGTTCACGCGATGGTCGATGATCCGCTGTATCCAATTGCCCAGCAATATTGGTATGCCTTGTTGTGCGAG
GATAACAACATTACAGCTTTGGCGAAACAGCTCGGCTTGCAGGCCAATGATCTCTACAATTTGCGCGATCGGCTACGGCG
GCGTTGTAAACCATTTTTGGTGCAATGGTTTTTGGTCTAA

Upstream 100 bases:

>100_bases
CGCGTGTGCCGCCATGTTCTGCAAATCATCCTAGCATTACCATTTGTTATGCAGTGCAGCCGATTGTATTAATTGAATTA
TGTTTAGAATGAGGCAGCAT

Downstream 100 bases:

>100_bases
GTTTCGACCAACTGGGTTTTTAAACCAACCAGATTGCCTGCACTATCCTTGCCCACAATATAGGCATCGATGTTAATCTC
GCCCACACGATAGACTTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MTKPDDLTDIVADLNQQQCWNLDGAGCQLLCQRSCEILQRNPIPNPAKFADVVVNVYHDYATVAAACDPQHPSHELIWVS
IMDEILSWYRCKRFSLGNGSQLCEHSPDLVAYENVKRSLPQFRFEARLRSYIHTIADRAIIHWWRAKDAKKHGGSGGRRI
HESSNVYTPKPQDQTYYLSQSHGRDHQRELGDTIASPDLSPDEHVERCELQRHMAAEVHAMVDDPLYPIAQQYWYALLCE
DNNITALAKQLGLQANDLYNLRDRLRRRCKPFLVQWFLV

Sequences:

>Translated_279_residues
MTKPDDLTDIVADLNQQQCWNLDGAGCQLLCQRSCEILQRNPIPNPAKFADVVVNVYHDYATVAAACDPQHPSHELIWVS
IMDEILSWYRCKRFSLGNGSQLCEHSPDLVAYENVKRSLPQFRFEARLRSYIHTIADRAIIHWWRAKDAKKHGGSGGRRI
HESSNVYTPKPQDQTYYLSQSHGRDHQRELGDTIASPDLSPDEHVERCELQRHMAAEVHAMVDDPLYPIAQQYWYALLCE
DNNITALAKQLGLQANDLYNLRDRLRRRCKPFLVQWFLV
>Mature_278_residues
TKPDDLTDIVADLNQQQCWNLDGAGCQLLCQRSCEILQRNPIPNPAKFADVVVNVYHDYATVAAACDPQHPSHELIWVSI
MDEILSWYRCKRFSLGNGSQLCEHSPDLVAYENVKRSLPQFRFEARLRSYIHTIADRAIIHWWRAKDAKKHGGSGGRRIH
ESSNVYTPKPQDQTYYLSQSHGRDHQRELGDTIASPDLSPDEHVERCELQRHMAAEVHAMVDDPLYPIAQQYWYALLCED
NNITALAKQLGLQANDLYNLRDRLRRRCKPFLVQWFLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32239; Mature: 32108

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKPDDLTDIVADLNQQQCWNLDGAGCQLLCQRSCEILQRNPIPNPAKFADVVVNVYHDY
CCCCHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ATVAAACDPQHPSHELIWVSIMDEILSWYRCKRFSLGNGSQLCEHSPDLVAYENVKRSLP
HHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEHHHHHHHHHH
QFRFEARLRSYIHTIADRAIIHWWRAKDAKKHGGSGGRRIHESSNVYTPKPQDQTYYLSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEEECC
SHGRDHQRELGDTIASPDLSPDEHVERCELQRHMAAEVHAMVDDPLYPIAQQYWYALLCE
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEEC
DNNITALAKQLGLQANDLYNLRDRLRRRCKPFLVQWFLV
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKPDDLTDIVADLNQQQCWNLDGAGCQLLCQRSCEILQRNPIPNPAKFADVVVNVYHDY
CCCHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ATVAAACDPQHPSHELIWVSIMDEILSWYRCKRFSLGNGSQLCEHSPDLVAYENVKRSLP
HHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEHHHHHHHHHH
QFRFEARLRSYIHTIADRAIIHWWRAKDAKKHGGSGGRRIHESSNVYTPKPQDQTYYLSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEEECC
SHGRDHQRELGDTIASPDLSPDEHVERCELQRHMAAEVHAMVDDPLYPIAQQYWYALLCE
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEEC
DNNITALAKQLGLQANDLYNLRDRLRRRCKPFLVQWFLV
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA