Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901476

Identifier: 159901476

GI number: 159901476

Start: 6298461

End: 6299852

Strand: Direct

Name: 159901476

Synonym: Haur_4965

Alternate gene names: NA

Gene position: 6298461-6299852 (Clockwise)

Preceding gene: 159901475

Following gene: 159901477

Centisome position: 99.24

GC content: 47.7

Gene sequence:

>1392_bases
ATGGCAAAACATACTGATAATGTGCAGCACTCAAAGCCCCTGAACAAACGGCAACGTGCTCGCTGGGATCAAGAACGCAA
GCAAAGCACCCGTGTCTTGCTGATCGCTGCTGCTGCGGTTGGCTTGGCGGTGCTACTGATTGGGATTGGGTTGGTCATTC
AGAAGGTGATTGTTCCCAATAAAACGATTGCGAATATTGCAGGGGTTGAAGTTACCAACGCTGAATATCAGCAATATCGT
CAAATTATGCAAGCCCAACAAGCAATTAATTTGGCTCAACAAATTCAGCAATATGCCCAATATCAATTGCAAGGTACTGA
GCAATTTGCGACCGATGTCACCAATTATATTGCTGGCTTGAAAGATCAGAATGCTCCGCTTGATTATGCGGTGCTCAATC
AGTTGATCAGCGATAAGATTCTTGAAAATAATGCTGCTGCTGAAGGCATTACGGTCAGTGATGAAGAATTGCAGCAAAGT
TTGGCAACCAAGTTTGCTCCTGCCAACGAAGTGATGAATCCAGTTGCCCCAGTAACCTCAACGACTGGTTTGACTGATAC
CGCTTCGTTGACTCCAACCCCAACATCAACTCCAACCCTCAGCGAAGCCAGTAATCGGGTTGATTCAGCGGTTACAACCT
ATTTTGGTACGTTGCGCGAATTTATCGAGGAAACTTCGACCTATGGCTTGGCTACCTTGCCATTTGATCGCGAAGCCTTC
AAAGCGTTTGTTTTGCACCAAGAACGTTTGCAATTGATGCGCCAAAAGCTTGGCGAAAAGTTGGTCACTGAGGATCAAGC
CATTAAGGAAGTTTATGCCGATGCACAGCAAATTTTCGTCACGGCGAATATTACCGATCCTGCCGACCCTATGACTGTTA
CCAAGTGGCTGCAAGCTAAAACCAAAATTGATGATATTGCTGCTCAGTTGACCGATACTGCCAGCTTTACCGACGTGCAG
ATCTTAAATACCAACGATAATGCAACCGATAATCCAACCACTGGCATGCAACCACTATCTCAATATGCTGCCTTTGGAAT
TACCGAGCCAATTTCAACCCAAGAAGTTGGGGTGATTGGTAAGCCTTATCAATCGACCCAAGGCTGGCATATTATCTTGG
TAAATCAGCGTGAGTGGCGACCAAGCCAAAGCGATTTGACTACCAAGCGCGATGAGGCGGTCAACAAGTGGATCGAGGAC
AAACGAGCTGTCTCGAATGTTCAGCGCTTCCCTGAACCAACCGCTACCACCGTTCCACCAACGATCGAGCCAATTCCAAC
CACCATTCCGCAGCCAACCACCGATCCGGCGGCGGTTACTGCAACCCCAACTGGTGAGGCTGCGCCAACCAGCGAAACTG
CACCAACTGAAGCAGTAACGCCAACACCATAA

Upstream 100 bases:

>100_bases
TTAGTTCTGCGTTGTTGGTTTAATGAAGCACAGGCACAGTCGCGAACTTCGCGCTGTGCCTGCTTTACTTTAGTTTCCCC
CAATGGAGTAGGCAAGGATT

Downstream 100 bases:

>100_bases
GCAAAAACAGGTAGAATAGTGGCGGGTCAATGGCGACCCGCCATTTGTTGTTTAATCTGAGGAGTTGCCATGAATCGATG
GTGGGCCAAACGAACCTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 462

Protein sequence:

>463_residues
MAKHTDNVQHSKPLNKRQRARWDQERKQSTRVLLIAAAAVGLAVLLIGIGLVIQKVIVPNKTIANIAGVEVTNAEYQQYR
QIMQAQQAINLAQQIQQYAQYQLQGTEQFATDVTNYIAGLKDQNAPLDYAVLNQLISDKILENNAAAEGITVSDEELQQS
LATKFAPANEVMNPVAPVTSTTGLTDTASLTPTPTSTPTLSEASNRVDSAVTTYFGTLREFIEETSTYGLATLPFDREAF
KAFVLHQERLQLMRQKLGEKLVTEDQAIKEVYADAQQIFVTANITDPADPMTVTKWLQAKTKIDDIAAQLTDTASFTDVQ
ILNTNDNATDNPTTGMQPLSQYAAFGITEPISTQEVGVIGKPYQSTQGWHIILVNQREWRPSQSDLTTKRDEAVNKWIED
KRAVSNVQRFPEPTATTVPPTIEPIPTTIPQPTTDPAAVTATPTGEAAPTSETAPTEAVTPTP

Sequences:

>Translated_463_residues
MAKHTDNVQHSKPLNKRQRARWDQERKQSTRVLLIAAAAVGLAVLLIGIGLVIQKVIVPNKTIANIAGVEVTNAEYQQYR
QIMQAQQAINLAQQIQQYAQYQLQGTEQFATDVTNYIAGLKDQNAPLDYAVLNQLISDKILENNAAAEGITVSDEELQQS
LATKFAPANEVMNPVAPVTSTTGLTDTASLTPTPTSTPTLSEASNRVDSAVTTYFGTLREFIEETSTYGLATLPFDREAF
KAFVLHQERLQLMRQKLGEKLVTEDQAIKEVYADAQQIFVTANITDPADPMTVTKWLQAKTKIDDIAAQLTDTASFTDVQ
ILNTNDNATDNPTTGMQPLSQYAAFGITEPISTQEVGVIGKPYQSTQGWHIILVNQREWRPSQSDLTTKRDEAVNKWIED
KRAVSNVQRFPEPTATTVPPTIEPIPTTIPQPTTDPAAVTATPTGEAAPTSETAPTEAVTPTP
>Mature_462_residues
AKHTDNVQHSKPLNKRQRARWDQERKQSTRVLLIAAAAVGLAVLLIGIGLVIQKVIVPNKTIANIAGVEVTNAEYQQYRQ
IMQAQQAINLAQQIQQYAQYQLQGTEQFATDVTNYIAGLKDQNAPLDYAVLNQLISDKILENNAAAEGITVSDEELQQSL
ATKFAPANEVMNPVAPVTSTTGLTDTASLTPTPTSTPTLSEASNRVDSAVTTYFGTLREFIEETSTYGLATLPFDREAFK
AFVLHQERLQLMRQKLGEKLVTEDQAIKEVYADAQQIFVTANITDPADPMTVTKWLQAKTKIDDIAAQLTDTASFTDVQI
LNTNDNATDNPTTGMQPLSQYAAFGITEPISTQEVGVIGKPYQSTQGWHIILVNQREWRPSQSDLTTKRDEAVNKWIEDK
RAVSNVQRFPEPTATTVPPTIEPIPTTIPQPTTDPAAVTATPTGEAAPTSETAPTEAVTPTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50658; Mature: 50527

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKHTDNVQHSKPLNKRQRARWDQERKQSTRVLLIAAAAVGLAVLLIGIGLVIQKVIVPN
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCC
KTIANIAGVEVTNAEYQQYRQIMQAQQAINLAQQIQQYAQYQLQGTEQFATDVTNYIAGL
CHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
KDQNAPLDYAVLNQLISDKILENNAAAEGITVSDEELQQSLATKFAPANEVMNPVAPVTS
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCC
TTGLTDTASLTPTPTSTPTLSEASNRVDSAVTTYFGTLREFIEETSTYGLATLPFDREAF
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHH
KAFVLHQERLQLMRQKLGEKLVTEDQAIKEVYADAQQIFVTANITDPADPMTVTKWLQAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEEECCCCCCHHHHHHHHHHH
TKIDDIAAQLTDTASFTDVQILNTNDNATDNPTTGMQPLSQYAAFGITEPISTQEVGVIG
HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
KPYQSTQGWHIILVNQREWRPSQSDLTTKRDEAVNKWIEDKRAVSNVQRFPEPTATTVPP
CCCCCCCCEEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
TIEPIPTTIPQPTTDPAAVTATPTGEAAPTSETAPTEAVTPTP
CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKHTDNVQHSKPLNKRQRARWDQERKQSTRVLLIAAAAVGLAVLLIGIGLVIQKVIVPN
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCC
KTIANIAGVEVTNAEYQQYRQIMQAQQAINLAQQIQQYAQYQLQGTEQFATDVTNYIAGL
CHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
KDQNAPLDYAVLNQLISDKILENNAAAEGITVSDEELQQSLATKFAPANEVMNPVAPVTS
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCC
TTGLTDTASLTPTPTSTPTLSEASNRVDSAVTTYFGTLREFIEETSTYGLATLPFDREAF
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHH
KAFVLHQERLQLMRQKLGEKLVTEDQAIKEVYADAQQIFVTANITDPADPMTVTKWLQAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEEECCCCCCHHHHHHHHHHH
TKIDDIAAQLTDTASFTDVQILNTNDNATDNPTTGMQPLSQYAAFGITEPISTQEVGVIG
HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
KPYQSTQGWHIILVNQREWRPSQSDLTTKRDEAVNKWIEDKRAVSNVQRFPEPTATTVPP
CCCCCCCCEEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
TIEPIPTTIPQPTTDPAAVTATPTGEAAPTSETAPTEAVTPTP
CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA