Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159901468

Identifier: 159901468

GI number: 159901468

Start: 6292197

End: 6293405

Strand: Reverse

Name: 159901468

Synonym: Haur_4957

Alternate gene names: NA

Gene position: 6293405-6292197 (Counterclockwise)

Preceding gene: 159901469

Following gene: 159901467

Centisome position: 99.16

GC content: 52.85

Gene sequence:

>1209_bases
ATGGTATGCTTTTGGCGCATTGCCCGATCCACACCCACATTTAATACATTTGAGGATGCCACCATGCCCGATCAAGATCA
CAATCAAGCCATCAATCGGCGGCAGTTTCTCAAGTTGGGCGCTATGTCCGGGTTGCTTGCCAGCATGCCCGAGCTAGCCG
CTGCCAACGAGGGAAGCCCTATTCGGCTACGAGAGCCAGAGGTAATGCAGGTTGGAGTTATCCTGCCCACAGAATTGCAC
AGCCATCGTGCAACGCTAGCGTTTTTGGCAGGTTTGCAGTTTGCCAGCGAGCAAGCAGCAGTTCCCTTTCGATTTAATCT
TCAAATGCCCCAAAGCCTCAACCACCTATTCACCGCCAAGGCTGCAACGGCAGATATTTGGCTAAGCCTTGGCACAGCCT
TAGGCATCCAAACCTTAAGCGACTGCTTGCCCAATCAGACGATCATTGCCGCCACCTTGGGCGAACATTTCGCGGTTGCC
AACCCCAGCCCCAATCTGTTGATTAATAGTTTTGGCCTGGCCGATGCTGCTTGGCAAAGCGCAGTTTGGGCGAGCCAACA
ACGGGGCAAACGCGCCATCATCATTCGTTCAAATGCGCTCAGTGGCTACGATTGTACGTGGGGTTTTGCCCAAGGGTTGT
TGGCAGCAGGCGCTGAGTTAATTGGCGATTTTAGCTTCGATTCAGCCGATCTGGCCGCCAAAGTTGCTAGCCTCAATCCC
GATGTTGTGTACCTAGCGCTCAATGCCGCCGAATCGCAGCAATGGTGGCATAGCTACACCACTAGCAGCAAAGCCTTGTG
GATTACGCCCAATGCTACGCTCGATGCCAAATTAGCTCAACGGCTGCGCAAACAAGGACTGGATTTGGCCTATGCTGGTG
GTTGGAGCACGGCGAATAATCCAAGCTTCCACCAGGCATTTAGCAAAGTCTATGGGGCTGAACCAACCCGCCATCATGCG
CTTGGCTACGATACCGCTTTGTTGATTGCCAGTGCTCGGGCTGGGCAAAAAACGATTCGCTACGATGGATTGCGGGGGGC
AACCACTATCAATGCCTATCGCACAAGCCATGCTCCAACCTATTTGCACTTTTTGGTTAGCCAACAACGCCAAGCAGCGC
CAATTAGCTTGGCAGCGCTTGATCAATCCAGCGTTCAACAGCGGCTTGATGCAACGCGGAGCGGCGTAATTCAACCATAT
TTTGAATAA

Upstream 100 bases:

>100_bases
CACCACCGCACCCCATGCGGTGGTTTTTTAATCTTTTATCTATCAGCCTAGGTACTATATGCTACTATGACCTTTTTCCT
ACAAGGGTTATTCCAGGGCT

Downstream 100 bases:

>100_bases
ACACAAAGACTCGGTTTGCTTGATTCTCTAGGGTTTGGTGTGCTGAAGGAGATCACCGATGATTGGATTAGCAGCCCCAC
TGAGTCTGCGGGCAGCGACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MVCFWRIARSTPTFNTFEDATMPDQDHNQAINRRQFLKLGAMSGLLASMPELAAANEGSPIRLREPEVMQVGVILPTELH
SHRATLAFLAGLQFASEQAAVPFRFNLQMPQSLNHLFTAKAATADIWLSLGTALGIQTLSDCLPNQTIIAATLGEHFAVA
NPSPNLLINSFGLADAAWQSAVWASQQRGKRAIIIRSNALSGYDCTWGFAQGLLAAGAELIGDFSFDSADLAAKVASLNP
DVVYLALNAAESQQWWHSYTTSSKALWITPNATLDAKLAQRLRKQGLDLAYAGGWSTANNPSFHQAFSKVYGAEPTRHHA
LGYDTALLIASARAGQKTIRYDGLRGATTINAYRTSHAPTYLHFLVSQQRQAAPISLAALDQSSVQQRLDATRSGVIQPY
FE

Sequences:

>Translated_402_residues
MVCFWRIARSTPTFNTFEDATMPDQDHNQAINRRQFLKLGAMSGLLASMPELAAANEGSPIRLREPEVMQVGVILPTELH
SHRATLAFLAGLQFASEQAAVPFRFNLQMPQSLNHLFTAKAATADIWLSLGTALGIQTLSDCLPNQTIIAATLGEHFAVA
NPSPNLLINSFGLADAAWQSAVWASQQRGKRAIIIRSNALSGYDCTWGFAQGLLAAGAELIGDFSFDSADLAAKVASLNP
DVVYLALNAAESQQWWHSYTTSSKALWITPNATLDAKLAQRLRKQGLDLAYAGGWSTANNPSFHQAFSKVYGAEPTRHHA
LGYDTALLIASARAGQKTIRYDGLRGATTINAYRTSHAPTYLHFLVSQQRQAAPISLAALDQSSVQQRLDATRSGVIQPY
FE
>Mature_402_residues
MVCFWRIARSTPTFNTFEDATMPDQDHNQAINRRQFLKLGAMSGLLASMPELAAANEGSPIRLREPEVMQVGVILPTELH
SHRATLAFLAGLQFASEQAAVPFRFNLQMPQSLNHLFTAKAATADIWLSLGTALGIQTLSDCLPNQTIIAATLGEHFAVA
NPSPNLLINSFGLADAAWQSAVWASQQRGKRAIIIRSNALSGYDCTWGFAQGLLAAGAELIGDFSFDSADLAAKVASLNP
DVVYLALNAAESQQWWHSYTTSSKALWITPNATLDAKLAQRLRKQGLDLAYAGGWSTANNPSFHQAFSKVYGAEPTRHHA
LGYDTALLIASARAGQKTIRYDGLRGATTINAYRTSHAPTYLHFLVSQQRQAAPISLAALDQSSVQQRLDATRSGVIQPY
FE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43673; Mature: 43673

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVCFWRIARSTPTFNTFEDATMPDQDHNQAINRRQFLKLGAMSGLLASMPELAAANEGSP
CEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCC
IRLREPEVMQVGVILPTELHSHRATLAFLAGLQFASEQAAVPFRFNLQMPQSLNHLFTAK
EEECCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHH
AATADIWLSLGTALGIQTLSDCLPNQTIIAATLGEHFAVANPSPNLLINSFGLADAAWQS
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCCCEEEECCCCCHHHHHH
AVWASQQRGKRAIIIRSNALSGYDCTWGFAQGLLAAGAELIGDFSFDSADLAAKVASLNP
HHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHCCCC
DVVYLALNAAESQQWWHSYTTSSKALWITPNATLDAKLAQRLRKQGLDLAYAGGWSTANN
CEEEEEEECCCCHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCC
PSFHQAFSKVYGAEPTRHHALGYDTALLIASARAGQKTIRYDGLRGATTINAYRTSHAPT
CHHHHHHHHHHCCCCCCCCCCCCCHHHEEEECCCCCCEEEECCCCCCEEEEEEECCCCCH
YLHFLVSQQRQAAPISLAALDQSSVQQRLDATRSGVIQPYFE
HHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MVCFWRIARSTPTFNTFEDATMPDQDHNQAINRRQFLKLGAMSGLLASMPELAAANEGSP
CEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCC
IRLREPEVMQVGVILPTELHSHRATLAFLAGLQFASEQAAVPFRFNLQMPQSLNHLFTAK
EEECCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHH
AATADIWLSLGTALGIQTLSDCLPNQTIIAATLGEHFAVANPSPNLLINSFGLADAAWQS
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCCCEEEECCCCCHHHHHH
AVWASQQRGKRAIIIRSNALSGYDCTWGFAQGLLAAGAELIGDFSFDSADLAAKVASLNP
HHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHCCCC
DVVYLALNAAESQQWWHSYTTSSKALWITPNATLDAKLAQRLRKQGLDLAYAGGWSTANN
CEEEEEEECCCCHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCC
PSFHQAFSKVYGAEPTRHHALGYDTALLIASARAGQKTIRYDGLRGATTINAYRTSHAPT
CHHHHHHHHHHCCCCCCCCCCCCCHHHEEEECCCCCCEEEECCCCCCEEEEEEECCCCCH
YLHFLVSQQRQAAPISLAALDQSSVQQRLDATRSGVIQPYFE
HHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA