| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901463
Identifier: 159901463
GI number: 159901463
Start: 6288866
End: 6289966
Strand: Reverse
Name: 159901463
Synonym: Haur_4952
Alternate gene names: NA
Gene position: 6289966-6288866 (Counterclockwise)
Preceding gene: 159901464
Following gene: 159901462
Centisome position: 99.11
GC content: 51.04
Gene sequence:
>1101_bases ATGCTCGTCCCTTTCGCAGTCGATCGATCAGCGATTGCCGAGCAATTTGAGCAAGGCTTGCGTAGCGCTCTGGCTCCCAG CATTCACGATGGCATGATCAAGGATGTTCATGTGGTTGTTGAAGAAGTTGGCGCTGGGGTGATTCTGCTTGAGCAAAAAA TTCAACAATTGCTTGGCAATCGCCATATTGATATTTTAGTATTGTGGCTGCAAAGTGGCCTAATTGAATACATTACGCCA TTTTTAGAGCGCATGCCACGCCCAACGCTGGTCGTCAACCTTGGTGAAAATATTCCACGCACGAGCGAACAGCATCCGTG GATTGTTCAACACAGTTTGGGGTTATGGCAGGCCCATTATGCGCTTGGACGGTGGGCGGCGGAACAGCTGAGCCGCAGCA CCGTGCATGCGTTGAGCCACTACGATAGTGGTTATGATCTGCATTATGCCCTTTTAGAGGGGTTTAACCAGGCTGGCGGC GAGACAGTTGGTCACTACCTGAGCCATGTTGCGCCTGATCGCGGCAATTTTACGCCACTCTGGCATTATTTGGCAGAAAC CCCTAGCGATCTGCTCTTTTATACGGCATGCGGCCCTGAGGCAAAACAATTTTTAGCGGCGTGGGCAGATAGTCCATTGC TTGGCAAACGATCGTTAGTCGTTAGTCCGATGGTTTGGTTTGAAATCGAGCCTGAGCTACGCTCAAAGCTAGCCCTAACG ACCTGTTTGCCATGGCATCCAGATCTCCTTTCGTCAGCGAATGCAGCAACAAACCCATTTGAAGCATTGGCGCAGCTTTT AGGCCTAGAGGCTGGAGCTTGCCTGGCTCAGGCACTGCTTAAGTCGCCCAATTCCGATGATCAAGGATTGTTGCATGCGC TGAGCAACGTAGCCTGGATGACCCCACGCGGCTCAATCGAACGTTATTCAAGCCAACAAACCAGTGTGCCACAGTTGTAC CTTATTCAAGCTCATCCAACCGATCAAACCAGCAACCAAGTTATCGCGCTTGAGCTTGCGACGCTTGATCTTAATCCACT GCTTCGCACCATTGAACAAGCGCCGCGCAGTGGCTGGCTCAACTCATATTTGTGTGTCTGA
Upstream 100 bases:
>100_bases TGACAATTAACTTTTGTATTGCCTTACAAGGCATCTTCCCATCGCAGACTTAATAGGTTGAGGATTTAAAGGAATGAACA ATCAGCGTTTGGGTATTGGT
Downstream 100 bases:
>100_bases TGAAGGTAACCCAAACAGAAAGGTATCCCGCTGTGTTGAAACAATCTCGACTTTCTGCTGTGGTAGCGGCACTCCTCGTT GGAGTGCTGTTTGTGCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MLVPFAVDRSAIAEQFEQGLRSALAPSIHDGMIKDVHVVVEEVGAGVILLEQKIQQLLGNRHIDILVLWLQSGLIEYITP FLERMPRPTLVVNLGENIPRTSEQHPWIVQHSLGLWQAHYALGRWAAEQLSRSTVHALSHYDSGYDLHYALLEGFNQAGG ETVGHYLSHVAPDRGNFTPLWHYLAETPSDLLFYTACGPEAKQFLAAWADSPLLGKRSLVVSPMVWFEIEPELRSKLALT TCLPWHPDLLSSANAATNPFEALAQLLGLEAGACLAQALLKSPNSDDQGLLHALSNVAWMTPRGSIERYSSQQTSVPQLY LIQAHPTDQTSNQVIALELATLDLNPLLRTIEQAPRSGWLNSYLCV
Sequences:
>Translated_366_residues MLVPFAVDRSAIAEQFEQGLRSALAPSIHDGMIKDVHVVVEEVGAGVILLEQKIQQLLGNRHIDILVLWLQSGLIEYITP FLERMPRPTLVVNLGENIPRTSEQHPWIVQHSLGLWQAHYALGRWAAEQLSRSTVHALSHYDSGYDLHYALLEGFNQAGG ETVGHYLSHVAPDRGNFTPLWHYLAETPSDLLFYTACGPEAKQFLAAWADSPLLGKRSLVVSPMVWFEIEPELRSKLALT TCLPWHPDLLSSANAATNPFEALAQLLGLEAGACLAQALLKSPNSDDQGLLHALSNVAWMTPRGSIERYSSQQTSVPQLY LIQAHPTDQTSNQVIALELATLDLNPLLRTIEQAPRSGWLNSYLCV >Mature_366_residues MLVPFAVDRSAIAEQFEQGLRSALAPSIHDGMIKDVHVVVEEVGAGVILLEQKIQQLLGNRHIDILVLWLQSGLIEYITP FLERMPRPTLVVNLGENIPRTSEQHPWIVQHSLGLWQAHYALGRWAAEQLSRSTVHALSHYDSGYDLHYALLEGFNQAGG ETVGHYLSHVAPDRGNFTPLWHYLAETPSDLLFYTACGPEAKQFLAAWADSPLLGKRSLVVSPMVWFEIEPELRSKLALT TCLPWHPDLLSSANAATNPFEALAQLLGLEAGACLAQALLKSPNSDDQGLLHALSNVAWMTPRGSIERYSSQQTSVPQLY LIQAHPTDQTSNQVIALELATLDLNPLLRTIEQAPRSGWLNSYLCV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40524; Mature: 40524
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVPFAVDRSAIAEQFEQGLRSALAPSIHDGMIKDVHVVVEEVGAGVILLEQKIQQLLGN CCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHCCCEEHHHHHHHHHHCC RHIDILVLWLQSGLIEYITPFLERMPRPTLVVNLGENIPRTSEQHPWIVQHSLGLWQAHY CCHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHH ALGRWAAEQLSRSTVHALSHYDSGYDLHYALLEGFNQAGGETVGHYLSHVAPDRGNFTPL HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHH WHYLAETPSDLLFYTACGPEAKQFLAAWADSPLLGKRSLVVSPMVWFEIEPELRSKLALT HHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCEEECCEEEEEECHHHHHHHHHH TCLPWHPDLLSSANAATNPFEALAQLLGLEAGACLAQALLKSPNSDDQGLLHALSNVAWM HCCCCCHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHEEC TPRGSIERYSSQQTSVPQLYLIQAHPTDQTSNQVIALELATLDLNPLLRTIEQAPRSGWL CCCCCHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCCCC NSYLCV CCCCCC >Mature Secondary Structure MLVPFAVDRSAIAEQFEQGLRSALAPSIHDGMIKDVHVVVEEVGAGVILLEQKIQQLLGN CCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHCCCEEHHHHHHHHHHCC RHIDILVLWLQSGLIEYITPFLERMPRPTLVVNLGENIPRTSEQHPWIVQHSLGLWQAHY CCHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHH ALGRWAAEQLSRSTVHALSHYDSGYDLHYALLEGFNQAGGETVGHYLSHVAPDRGNFTPL HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHH WHYLAETPSDLLFYTACGPEAKQFLAAWADSPLLGKRSLVVSPMVWFEIEPELRSKLALT HHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCEEECCEEEEEECHHHHHHHHHH TCLPWHPDLLSSANAATNPFEALAQLLGLEAGACLAQALLKSPNSDDQGLLHALSNVAWM HCCCCCHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHEEC TPRGSIERYSSQQTSVPQLYLIQAHPTDQTSNQVIALELATLDLNPLLRTIEQAPRSGWL CCCCCHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCCCC NSYLCV CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA