Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901463

Identifier: 159901463

GI number: 159901463

Start: 6288866

End: 6289966

Strand: Reverse

Name: 159901463

Synonym: Haur_4952

Alternate gene names: NA

Gene position: 6289966-6288866 (Counterclockwise)

Preceding gene: 159901464

Following gene: 159901462

Centisome position: 99.11

GC content: 51.04

Gene sequence:

>1101_bases
ATGCTCGTCCCTTTCGCAGTCGATCGATCAGCGATTGCCGAGCAATTTGAGCAAGGCTTGCGTAGCGCTCTGGCTCCCAG
CATTCACGATGGCATGATCAAGGATGTTCATGTGGTTGTTGAAGAAGTTGGCGCTGGGGTGATTCTGCTTGAGCAAAAAA
TTCAACAATTGCTTGGCAATCGCCATATTGATATTTTAGTATTGTGGCTGCAAAGTGGCCTAATTGAATACATTACGCCA
TTTTTAGAGCGCATGCCACGCCCAACGCTGGTCGTCAACCTTGGTGAAAATATTCCACGCACGAGCGAACAGCATCCGTG
GATTGTTCAACACAGTTTGGGGTTATGGCAGGCCCATTATGCGCTTGGACGGTGGGCGGCGGAACAGCTGAGCCGCAGCA
CCGTGCATGCGTTGAGCCACTACGATAGTGGTTATGATCTGCATTATGCCCTTTTAGAGGGGTTTAACCAGGCTGGCGGC
GAGACAGTTGGTCACTACCTGAGCCATGTTGCGCCTGATCGCGGCAATTTTACGCCACTCTGGCATTATTTGGCAGAAAC
CCCTAGCGATCTGCTCTTTTATACGGCATGCGGCCCTGAGGCAAAACAATTTTTAGCGGCGTGGGCAGATAGTCCATTGC
TTGGCAAACGATCGTTAGTCGTTAGTCCGATGGTTTGGTTTGAAATCGAGCCTGAGCTACGCTCAAAGCTAGCCCTAACG
ACCTGTTTGCCATGGCATCCAGATCTCCTTTCGTCAGCGAATGCAGCAACAAACCCATTTGAAGCATTGGCGCAGCTTTT
AGGCCTAGAGGCTGGAGCTTGCCTGGCTCAGGCACTGCTTAAGTCGCCCAATTCCGATGATCAAGGATTGTTGCATGCGC
TGAGCAACGTAGCCTGGATGACCCCACGCGGCTCAATCGAACGTTATTCAAGCCAACAAACCAGTGTGCCACAGTTGTAC
CTTATTCAAGCTCATCCAACCGATCAAACCAGCAACCAAGTTATCGCGCTTGAGCTTGCGACGCTTGATCTTAATCCACT
GCTTCGCACCATTGAACAAGCGCCGCGCAGTGGCTGGCTCAACTCATATTTGTGTGTCTGA

Upstream 100 bases:

>100_bases
TGACAATTAACTTTTGTATTGCCTTACAAGGCATCTTCCCATCGCAGACTTAATAGGTTGAGGATTTAAAGGAATGAACA
ATCAGCGTTTGGGTATTGGT

Downstream 100 bases:

>100_bases
TGAAGGTAACCCAAACAGAAAGGTATCCCGCTGTGTTGAAACAATCTCGACTTTCTGCTGTGGTAGCGGCACTCCTCGTT
GGAGTGCTGTTTGTGCTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MLVPFAVDRSAIAEQFEQGLRSALAPSIHDGMIKDVHVVVEEVGAGVILLEQKIQQLLGNRHIDILVLWLQSGLIEYITP
FLERMPRPTLVVNLGENIPRTSEQHPWIVQHSLGLWQAHYALGRWAAEQLSRSTVHALSHYDSGYDLHYALLEGFNQAGG
ETVGHYLSHVAPDRGNFTPLWHYLAETPSDLLFYTACGPEAKQFLAAWADSPLLGKRSLVVSPMVWFEIEPELRSKLALT
TCLPWHPDLLSSANAATNPFEALAQLLGLEAGACLAQALLKSPNSDDQGLLHALSNVAWMTPRGSIERYSSQQTSVPQLY
LIQAHPTDQTSNQVIALELATLDLNPLLRTIEQAPRSGWLNSYLCV

Sequences:

>Translated_366_residues
MLVPFAVDRSAIAEQFEQGLRSALAPSIHDGMIKDVHVVVEEVGAGVILLEQKIQQLLGNRHIDILVLWLQSGLIEYITP
FLERMPRPTLVVNLGENIPRTSEQHPWIVQHSLGLWQAHYALGRWAAEQLSRSTVHALSHYDSGYDLHYALLEGFNQAGG
ETVGHYLSHVAPDRGNFTPLWHYLAETPSDLLFYTACGPEAKQFLAAWADSPLLGKRSLVVSPMVWFEIEPELRSKLALT
TCLPWHPDLLSSANAATNPFEALAQLLGLEAGACLAQALLKSPNSDDQGLLHALSNVAWMTPRGSIERYSSQQTSVPQLY
LIQAHPTDQTSNQVIALELATLDLNPLLRTIEQAPRSGWLNSYLCV
>Mature_366_residues
MLVPFAVDRSAIAEQFEQGLRSALAPSIHDGMIKDVHVVVEEVGAGVILLEQKIQQLLGNRHIDILVLWLQSGLIEYITP
FLERMPRPTLVVNLGENIPRTSEQHPWIVQHSLGLWQAHYALGRWAAEQLSRSTVHALSHYDSGYDLHYALLEGFNQAGG
ETVGHYLSHVAPDRGNFTPLWHYLAETPSDLLFYTACGPEAKQFLAAWADSPLLGKRSLVVSPMVWFEIEPELRSKLALT
TCLPWHPDLLSSANAATNPFEALAQLLGLEAGACLAQALLKSPNSDDQGLLHALSNVAWMTPRGSIERYSSQQTSVPQLY
LIQAHPTDQTSNQVIALELATLDLNPLLRTIEQAPRSGWLNSYLCV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40524; Mature: 40524

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVPFAVDRSAIAEQFEQGLRSALAPSIHDGMIKDVHVVVEEVGAGVILLEQKIQQLLGN
CCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHCCCEEHHHHHHHHHHCC
RHIDILVLWLQSGLIEYITPFLERMPRPTLVVNLGENIPRTSEQHPWIVQHSLGLWQAHY
CCHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHH
ALGRWAAEQLSRSTVHALSHYDSGYDLHYALLEGFNQAGGETVGHYLSHVAPDRGNFTPL
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHH
WHYLAETPSDLLFYTACGPEAKQFLAAWADSPLLGKRSLVVSPMVWFEIEPELRSKLALT
HHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCEEECCEEEEEECHHHHHHHHHH
TCLPWHPDLLSSANAATNPFEALAQLLGLEAGACLAQALLKSPNSDDQGLLHALSNVAWM
HCCCCCHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHEEC
TPRGSIERYSSQQTSVPQLYLIQAHPTDQTSNQVIALELATLDLNPLLRTIEQAPRSGWL
CCCCCHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCCCC
NSYLCV
CCCCCC
>Mature Secondary Structure
MLVPFAVDRSAIAEQFEQGLRSALAPSIHDGMIKDVHVVVEEVGAGVILLEQKIQQLLGN
CCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHCCCEEHHHHHHHHHHCC
RHIDILVLWLQSGLIEYITPFLERMPRPTLVVNLGENIPRTSEQHPWIVQHSLGLWQAHY
CCHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHH
ALGRWAAEQLSRSTVHALSHYDSGYDLHYALLEGFNQAGGETVGHYLSHVAPDRGNFTPL
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHH
WHYLAETPSDLLFYTACGPEAKQFLAAWADSPLLGKRSLVVSPMVWFEIEPELRSKLALT
HHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCEEECCEEEEEECHHHHHHHHHH
TCLPWHPDLLSSANAATNPFEALAQLLGLEAGACLAQALLKSPNSDDQGLLHALSNVAWM
HCCCCCHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHEEC
TPRGSIERYSSQQTSVPQLYLIQAHPTDQTSNQVIALELATLDLNPLLRTIEQAPRSGWL
CCCCCHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCCCC
NSYLCV
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA