Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901461

Identifier: 159901461

GI number: 159901461

Start: 6277715

End: 6278461

Strand: Reverse

Name: 159901461

Synonym: Haur_4950

Alternate gene names: NA

Gene position: 6278461-6277715 (Counterclockwise)

Preceding gene: 159901462

Following gene: 159901458

Centisome position: 98.93

GC content: 50.87

Gene sequence:

>747_bases
ATGGAACTAACAGGCACATTCAACAGCTTTCCTTTACGCGAATTACTCGAACTCATGCAACAAAGCTCAATGTGTGGCGA
GCTTGAAATTGTCGGCAAACATGGACGTGGCTTGATCCTGACCCGCGATGGGTTGGTGCGCCACGCTGAATATAACGATA
AAGTTGGGCCAGAGGCAGTTTGGCTGCTATTTGAAGAACCCAATGCTGAATTCGCGGTGCGCGATTTACGTGAGCTAACC
CAAGAAACCATGCTCTCGGATGCAATGAGTTTGTGTGACGAGGCTGAGGATCGCGCTCGTTCATGGAGTGAATTGCGTAT
TTTTATCCCTAGCGATAATGCGATTCCCTATATTCGCAATGGCGCAACGCCCAGCCAACCACTCGATTCGATGGCGGTGG
CAGTAGCACGGACAATCAATGGTGAAAGCAGCATTCGCCAGATAGCTGAACGTTTGATCATCGAGCCAATTGATGTTTCA
CGGGCAATTGTTCGCTTGATCAAAGCTGGCGTAGTGGCAATTATGGGGGTTGATCCTGCTAAAAGCTTAGAAACCAAGGT
GTTGGAGCCAACAACTGCCTCAATGCCCTTGGCTAGCTTAACGCCAACCCTAACCCCAGCCAAACAACCTGAGTTGACGA
CGGCTCCACTGCCAACCCAACCAGCAGCAACGCCAACGAGCGATATTAGTCGCCCAAATCAAGGTGGTCTGCTTGGTCGT
TTGGCTCAAGGCCCAGTCCGCCGCTAA

Upstream 100 bases:

>100_bases
CCGCAGGAGTAAATCTCAGTACTAACCAAGAAGGGGACTACAGATTGACATATGTATAAGCTAGTTATGTTACTATGGCA
AACAGATTCGGGAGGTTGCC

Downstream 100 bases:

>100_bases
ACAATATTGCAACAGCTTCCTTGATTGGCTACAGTGCTCCCGTGCTATAGCCAATTTGTTTAATGAACGTTAACACAGCG
GCACAGAGTTTATCAGGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MELTGTFNSFPLRELLELMQQSSMCGELEIVGKHGRGLILTRDGLVRHAEYNDKVGPEAVWLLFEEPNAEFAVRDLRELT
QETMLSDAMSLCDEAEDRARSWSELRIFIPSDNAIPYIRNGATPSQPLDSMAVAVARTINGESSIRQIAERLIIEPIDVS
RAIVRLIKAGVVAIMGVDPAKSLETKVLEPTTASMPLASLTPTLTPAKQPELTTAPLPTQPAATPTSDISRPNQGGLLGR
LAQGPVRR

Sequences:

>Translated_248_residues
MELTGTFNSFPLRELLELMQQSSMCGELEIVGKHGRGLILTRDGLVRHAEYNDKVGPEAVWLLFEEPNAEFAVRDLRELT
QETMLSDAMSLCDEAEDRARSWSELRIFIPSDNAIPYIRNGATPSQPLDSMAVAVARTINGESSIRQIAERLIIEPIDVS
RAIVRLIKAGVVAIMGVDPAKSLETKVLEPTTASMPLASLTPTLTPAKQPELTTAPLPTQPAATPTSDISRPNQGGLLGR
LAQGPVRR
>Mature_248_residues
MELTGTFNSFPLRELLELMQQSSMCGELEIVGKHGRGLILTRDGLVRHAEYNDKVGPEAVWLLFEEPNAEFAVRDLRELT
QETMLSDAMSLCDEAEDRARSWSELRIFIPSDNAIPYIRNGATPSQPLDSMAVAVARTINGESSIRQIAERLIIEPIDVS
RAIVRLIKAGVVAIMGVDPAKSLETKVLEPTTASMPLASLTPTLTPAKQPELTTAPLPTQPAATPTSDISRPNQGGLLGR
LAQGPVRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27020; Mature: 27020

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELTGTFNSFPLRELLELMQQSSMCGELEIVGKHGRGLILTRDGLVRHAEYNDKVGPEAV
CCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCEEECCCCCCCCCCEE
WLLFEEPNAEFAVRDLRELTQETMLSDAMSLCDEAEDRARSWSELRIFIPSDNAIPYIRN
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEC
GATPSQPLDSMAVAVARTINGESSIRQIAERLIIEPIDVSRAIVRLIKAGVVAIMGVDPA
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEECCCCH
KSLETKVLEPTTASMPLASLTPTLTPAKQPELTTAPLPTQPAATPTSDISRPNQGGLLGR
HHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHH
LAQGPVRR
HCCCCCCC
>Mature Secondary Structure
MELTGTFNSFPLRELLELMQQSSMCGELEIVGKHGRGLILTRDGLVRHAEYNDKVGPEAV
CCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCEEECCCCCCCCCCEE
WLLFEEPNAEFAVRDLRELTQETMLSDAMSLCDEAEDRARSWSELRIFIPSDNAIPYIRN
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEC
GATPSQPLDSMAVAVARTINGESSIRQIAERLIIEPIDVSRAIVRLIKAGVVAIMGVDPA
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEECCCCH
KSLETKVLEPTTASMPLASLTPTLTPAKQPELTTAPLPTQPAATPTSDISRPNQGGLLGR
HHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHH
LAQGPVRR
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA