| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901461
Identifier: 159901461
GI number: 159901461
Start: 6277715
End: 6278461
Strand: Reverse
Name: 159901461
Synonym: Haur_4950
Alternate gene names: NA
Gene position: 6278461-6277715 (Counterclockwise)
Preceding gene: 159901462
Following gene: 159901458
Centisome position: 98.93
GC content: 50.87
Gene sequence:
>747_bases ATGGAACTAACAGGCACATTCAACAGCTTTCCTTTACGCGAATTACTCGAACTCATGCAACAAAGCTCAATGTGTGGCGA GCTTGAAATTGTCGGCAAACATGGACGTGGCTTGATCCTGACCCGCGATGGGTTGGTGCGCCACGCTGAATATAACGATA AAGTTGGGCCAGAGGCAGTTTGGCTGCTATTTGAAGAACCCAATGCTGAATTCGCGGTGCGCGATTTACGTGAGCTAACC CAAGAAACCATGCTCTCGGATGCAATGAGTTTGTGTGACGAGGCTGAGGATCGCGCTCGTTCATGGAGTGAATTGCGTAT TTTTATCCCTAGCGATAATGCGATTCCCTATATTCGCAATGGCGCAACGCCCAGCCAACCACTCGATTCGATGGCGGTGG CAGTAGCACGGACAATCAATGGTGAAAGCAGCATTCGCCAGATAGCTGAACGTTTGATCATCGAGCCAATTGATGTTTCA CGGGCAATTGTTCGCTTGATCAAAGCTGGCGTAGTGGCAATTATGGGGGTTGATCCTGCTAAAAGCTTAGAAACCAAGGT GTTGGAGCCAACAACTGCCTCAATGCCCTTGGCTAGCTTAACGCCAACCCTAACCCCAGCCAAACAACCTGAGTTGACGA CGGCTCCACTGCCAACCCAACCAGCAGCAACGCCAACGAGCGATATTAGTCGCCCAAATCAAGGTGGTCTGCTTGGTCGT TTGGCTCAAGGCCCAGTCCGCCGCTAA
Upstream 100 bases:
>100_bases CCGCAGGAGTAAATCTCAGTACTAACCAAGAAGGGGACTACAGATTGACATATGTATAAGCTAGTTATGTTACTATGGCA AACAGATTCGGGAGGTTGCC
Downstream 100 bases:
>100_bases ACAATATTGCAACAGCTTCCTTGATTGGCTACAGTGCTCCCGTGCTATAGCCAATTTGTTTAATGAACGTTAACACAGCG GCACAGAGTTTATCAGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MELTGTFNSFPLRELLELMQQSSMCGELEIVGKHGRGLILTRDGLVRHAEYNDKVGPEAVWLLFEEPNAEFAVRDLRELT QETMLSDAMSLCDEAEDRARSWSELRIFIPSDNAIPYIRNGATPSQPLDSMAVAVARTINGESSIRQIAERLIIEPIDVS RAIVRLIKAGVVAIMGVDPAKSLETKVLEPTTASMPLASLTPTLTPAKQPELTTAPLPTQPAATPTSDISRPNQGGLLGR LAQGPVRR
Sequences:
>Translated_248_residues MELTGTFNSFPLRELLELMQQSSMCGELEIVGKHGRGLILTRDGLVRHAEYNDKVGPEAVWLLFEEPNAEFAVRDLRELT QETMLSDAMSLCDEAEDRARSWSELRIFIPSDNAIPYIRNGATPSQPLDSMAVAVARTINGESSIRQIAERLIIEPIDVS RAIVRLIKAGVVAIMGVDPAKSLETKVLEPTTASMPLASLTPTLTPAKQPELTTAPLPTQPAATPTSDISRPNQGGLLGR LAQGPVRR >Mature_248_residues MELTGTFNSFPLRELLELMQQSSMCGELEIVGKHGRGLILTRDGLVRHAEYNDKVGPEAVWLLFEEPNAEFAVRDLRELT QETMLSDAMSLCDEAEDRARSWSELRIFIPSDNAIPYIRNGATPSQPLDSMAVAVARTINGESSIRQIAERLIIEPIDVS RAIVRLIKAGVVAIMGVDPAKSLETKVLEPTTASMPLASLTPTLTPAKQPELTTAPLPTQPAATPTSDISRPNQGGLLGR LAQGPVRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27020; Mature: 27020
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELTGTFNSFPLRELLELMQQSSMCGELEIVGKHGRGLILTRDGLVRHAEYNDKVGPEAV CCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCEEECCCCCCCCCCEE WLLFEEPNAEFAVRDLRELTQETMLSDAMSLCDEAEDRARSWSELRIFIPSDNAIPYIRN EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEC GATPSQPLDSMAVAVARTINGESSIRQIAERLIIEPIDVSRAIVRLIKAGVVAIMGVDPA CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEECCCCH KSLETKVLEPTTASMPLASLTPTLTPAKQPELTTAPLPTQPAATPTSDISRPNQGGLLGR HHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHH LAQGPVRR HCCCCCCC >Mature Secondary Structure MELTGTFNSFPLRELLELMQQSSMCGELEIVGKHGRGLILTRDGLVRHAEYNDKVGPEAV CCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCEEECCCCCCCCCCEE WLLFEEPNAEFAVRDLRELTQETMLSDAMSLCDEAEDRARSWSELRIFIPSDNAIPYIRN EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEC GATPSQPLDSMAVAVARTINGESSIRQIAERLIIEPIDVSRAIVRLIKAGVVAIMGVDPA CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEECCCCH KSLETKVLEPTTASMPLASLTPTLTPAKQPELTTAPLPTQPAATPTSDISRPNQGGLLGR HHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHH LAQGPVRR HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA