| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yeaC [H]
Identifier: 159901415
GI number: 159901415
Start: 6241072
End: 6242049
Strand: Reverse
Name: yeaC [H]
Synonym: Haur_4904
Alternate gene names: 159901415
Gene position: 6242049-6241072 (Counterclockwise)
Preceding gene: 159901421
Following gene: 159901414
Centisome position: 98.35
GC content: 48.88
Gene sequence:
>978_bases TTGGAAACAAATAGTAGCGATGTACGCCGCGCAGGCGAGGCCTTGCAAAGCCTTGTGGGCGAAGTAGGAAAAATTGTTGT TGGGCAGCGGGCCTTAGCTGAACGCATCTTGATTGGTTTGTTGGCCAATGGTCACTTATTAATTGAAGGTGTTCCAGGGT TGGCCAAAACCTTGATGGTTAAAAGCATGGCCGAAGGGATTCATGCCCAATTTGAACGGATTCAGTTTACCCCCGATTTG TTGCCTGGCGATTTGATTGGCACGCAAATTTACAATCAACGCACTGGCGATTTCTCGATTAAAAAAGGGCCAATTTTTAC CAACTTTTTGCTGGCCGACGAAATTAACCGTGCCCCAGCCAAAGTGCAAAGTGCCTTGCTCGAAGCCATGCAAGAGCGCC AAGTGACGATTGGCTCAGATACTTTTAAATTGCCCCACCCGTATTTGGTGATGGCAACCCAAAACCCCATTGAAAACGAT GGAACCTACCCCTTGCCAGAAGCTCAAGTTGACCGTTTTATGCTCAAAGTGGTGGTCGATTATCCCACCCGCGAGGAAGA ATACGAAATTCTCAATCGCATGACTGGGGCAACCACCCCCAAAATGAGCACAACAATGACGATCGAGGAGCTTGATAACG CTCGCAAGATTTTCCATCAAATTTATATTGACGATCGGGTCAAGCATTATATTTTGGATTTGGTGTTTGCCACCCGTAAA CCTGAGCAATATGGCTTGGCCCAAATCAAGCCTTATATTGAATTTGGCGCATCGCCACGGGCCACAATTTTTATGACCTT GGCCGCCAAAGGAGCCGCCTTCTTGCAAGGCCGCGCCTATGTCACGCCCGATGACGTTAAACATATGGCCTTGGATGTGC TGCGCCACCGCTTGATCGCCACCTACGAAGCCGAAGCCGAAAACATCACTTCGGAAAACTTGGTCGCTCAAATTCTCAAT CGGGTGCGGGTGCCGTAG
Upstream 100 bases:
>100_bases CTTAAACGCAGCTAAAAAAGCGGGTTTTTGGCCCAAGGTTATGGTATTATCGACAACAGAAAAAGATTCGGCTACCCGTT GTTGACGTGCGAGGTTCACC
Downstream 100 bases:
>100_bases CCATAGAACATAGAGCATAGAGCATAAGGGTCAGGATTCAGAGGTCAGAGACTAGTAAGGAATTGACACTGGATTTTGAG AGATGAAACCTTCGCGTGCT
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues METNSSDVRRAGEALQSLVGEVGKIVVGQRALAERILIGLLANGHLLIEGVPGLAKTLMVKSMAEGIHAQFERIQFTPDL LPGDLIGTQIYNQRTGDFSIKKGPIFTNFLLADEINRAPAKVQSALLEAMQERQVTIGSDTFKLPHPYLVMATQNPIEND GTYPLPEAQVDRFMLKVVVDYPTREEEYEILNRMTGATTPKMSTTMTIEELDNARKIFHQIYIDDRVKHYILDLVFATRK PEQYGLAQIKPYIEFGASPRATIFMTLAAKGAAFLQGRAYVTPDDVKHMALDVLRHRLIATYEAEAENITSENLVAQILN RVRVP
Sequences:
>Translated_325_residues METNSSDVRRAGEALQSLVGEVGKIVVGQRALAERILIGLLANGHLLIEGVPGLAKTLMVKSMAEGIHAQFERIQFTPDL LPGDLIGTQIYNQRTGDFSIKKGPIFTNFLLADEINRAPAKVQSALLEAMQERQVTIGSDTFKLPHPYLVMATQNPIEND GTYPLPEAQVDRFMLKVVVDYPTREEEYEILNRMTGATTPKMSTTMTIEELDNARKIFHQIYIDDRVKHYILDLVFATRK PEQYGLAQIKPYIEFGASPRATIFMTLAAKGAAFLQGRAYVTPDDVKHMALDVLRHRLIATYEAEAENITSENLVAQILN RVRVP >Mature_325_residues METNSSDVRRAGEALQSLVGEVGKIVVGQRALAERILIGLLANGHLLIEGVPGLAKTLMVKSMAEGIHAQFERIQFTPDL LPGDLIGTQIYNQRTGDFSIKKGPIFTNFLLADEINRAPAKVQSALLEAMQERQVTIGSDTFKLPHPYLVMATQNPIEND GTYPLPEAQVDRFMLKVVVDYPTREEEYEILNRMTGATTPKMSTTMTIEELDNARKIFHQIYIDDRVKHYILDLVFATRK PEQYGLAQIKPYIEFGASPRATIFMTLAAKGAAFLQGRAYVTPDDVKHMALDVLRHRLIATYEAEAENITSENLVAQILN RVRVP
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 36324; Mature: 36324
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METNSSDVRRAGEALQSLVGEVGKIVVGQRALAERILIGLLANGHLLIEGVPGLAKTLMV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH KSMAEGIHAQFERIQFTPDLLPGDLIGTQIYNQRTGDFSIKKGPIFTNFLLADEINRAPA HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCEEHHHHHHHHCCCHH KVQSALLEAMQERQVTIGSDTFKLPHPYLVMATQNPIENDGTYPLPEAQVDRFMLKVVVD HHHHHHHHHHHHCCEEECCCCEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCC YPTREEEYEILNRMTGATTPKMSTTMTIEELDNARKIFHQIYIDDRVKHYILDLVFATRK CCCCHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PEQYGLAQIKPYIEFGASPRATIFMTLAAKGAAFLQGRAYVTPDDVKHMALDVLRHRLIA CCCCCHHHHHHHHHCCCCCCEEEEEEEHHCCHHHHCCCCEECHHHHHHHHHHHHHHHHHH TYEAEAENITSENLVAQILNRVRVP HHHHHHHHCCHHHHHHHHHHHHCCC >Mature Secondary Structure METNSSDVRRAGEALQSLVGEVGKIVVGQRALAERILIGLLANGHLLIEGVPGLAKTLMV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH KSMAEGIHAQFERIQFTPDLLPGDLIGTQIYNQRTGDFSIKKGPIFTNFLLADEINRAPA HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCEEHHHHHHHHCCCHH KVQSALLEAMQERQVTIGSDTFKLPHPYLVMATQNPIENDGTYPLPEAQVDRFMLKVVVD HHHHHHHHHHHHCCEEECCCCEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCC YPTREEEYEILNRMTGATTPKMSTTMTIEELDNARKIFHQIYIDDRVKHYILDLVFATRK CCCCHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PEQYGLAQIKPYIEFGASPRATIFMTLAAKGAAFLQGRAYVTPDDVKHMALDVLRHRLIA CCCCCHHHHHHHHHCCCCCCEEEEEEEHHCCHHHHCCCCEECHHHHHHHHHHHHHHHHHH TYEAEAENITSENLVAQILNRVRVP HHHHHHHHCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]