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The map label for this gene is 159901395

Identifier: 159901395

GI number: 159901395

Start: 6219615

End: 6220436

Strand: Reverse

Name: 159901395

Synonym: Haur_4884

Alternate gene names: NA

Gene position: 6220436-6219615 (Counterclockwise)

Preceding gene: 159901396

Following gene: 159901392

Centisome position: 98.01

GC content: 54.26

Gene sequence:

>822_bases
ATGCTGCTACGCTTATTAGCAGGATTTGGCTTGAGTTTGCTGGTTGGTGGGCTGGGCTACTGGCGACGCTCGTTAAGCCT
GAGCGGTTGGCTCGGTGCAGTCTTGATCGGCACCTTGACGGTGGGCTGTGGCAGTTGGGCTTGGGGCTGGCTGATTATTT
TGTTCTTCGCTAGCTCAAGTTTGCTTTCCAAAGTGGGCAAGCGTCGCAAAGCAGCCGTGGCGCTCGATAAATTCAGCAAA
GATGATCGACGCGATTTATGGCAGGCCATGGCCAACGGCGGTATTCCCTTAATAACGGCCTTGGGCTATGCTTGGCAACC
ACATTTCGCTTGGTGGGCCTTGGCCCTCGGTGCAACCGCCACTGCCACTGCCGATACTTGGGCCACCGAAATTGGCACCC
TGAGCAAAGGTCGCCCATTTATGCTCACAACCTTTAAGCAAGTTGAACGCGGACGCTCAGGAGCGATTTCGGGCTTAGGC
ATGGCCGCTACCAGCCTTGGAGCCTTGCTGATTGGCCTAAGTGCTTGGGGTTTGACTAGTTTAGGGCTTGGTAATGGTCA
AGAACCACAGGTGTGGTTTGTGGTTGCCGCAACAATTGGTGGGATTGCTGGCTCTTTGGCCGATAGCTTGCTCGGCGCGA
CGGTGCAGCAAATGCGCTGGTGCGATCACTGCGCCAGCGAAACCGAGCGGACAATCCATAAATGTGGCAACCAAACCCGC
CATTATCGCGGCCTAGCTTGGCTCAACAACGATTGGGTTAATTTGATTAGCACTGGAGCGGGAGCCTTGGTTGCATTATT
AATTGCGGTTTTAGCCAATTAA

Upstream 100 bases:

>100_bases
ACATCAAAACTGGGCAATCGGCCTAAATTTTTAATCCCTCACCCCAACCCCTCGTCCGCCGTAGTGGGCGAGGGGCTATT
CTATTCTGAGGTATAGCGGC

Downstream 100 bases:

>100_bases
AAATAATTACTGGTATACCACAGTGAATACTTGATATGGCGAAACTCACGGCTGGGATAAATCACCATTGGGTCATCAGC
ATCGATCTGCACTGGAATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MLLRLLAGFGLSLLVGGLGYWRRSLSLSGWLGAVLIGTLTVGCGSWAWGWLIILFFASSSLLSKVGKRRKAAVALDKFSK
DDRRDLWQAMANGGIPLITALGYAWQPHFAWWALALGATATATADTWATEIGTLSKGRPFMLTTFKQVERGRSGAISGLG
MAATSLGALLIGLSAWGLTSLGLGNGQEPQVWFVVAATIGGIAGSLADSLLGATVQQMRWCDHCASETERTIHKCGNQTR
HYRGLAWLNNDWVNLISTGAGALVALLIAVLAN

Sequences:

>Translated_273_residues
MLLRLLAGFGLSLLVGGLGYWRRSLSLSGWLGAVLIGTLTVGCGSWAWGWLIILFFASSSLLSKVGKRRKAAVALDKFSK
DDRRDLWQAMANGGIPLITALGYAWQPHFAWWALALGATATATADTWATEIGTLSKGRPFMLTTFKQVERGRSGAISGLG
MAATSLGALLIGLSAWGLTSLGLGNGQEPQVWFVVAATIGGIAGSLADSLLGATVQQMRWCDHCASETERTIHKCGNQTR
HYRGLAWLNNDWVNLISTGAGALVALLIAVLAN
>Mature_273_residues
MLLRLLAGFGLSLLVGGLGYWRRSLSLSGWLGAVLIGTLTVGCGSWAWGWLIILFFASSSLLSKVGKRRKAAVALDKFSK
DDRRDLWQAMANGGIPLITALGYAWQPHFAWWALALGATATATADTWATEIGTLSKGRPFMLTTFKQVERGRSGAISGLG
MAATSLGALLIGLSAWGLTSLGLGNGQEPQVWFVVAATIGGIAGSLADSLLGATVQQMRWCDHCASETERTIHKCGNQTR
HYRGLAWLNNDWVNLISTGAGALVALLIAVLAN

Specific function: Unknown

COG id: COG1836

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TMEM19 family [H]

Homologues:

Organism=Homo sapiens, GI21361720, Length=284, Percent_Identity=29.9295774647887, Blast_Score=96, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24663759, Length=267, Percent_Identity=28.4644194756554, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24663763, Length=267, Percent_Identity=28.4644194756554, Blast_Score=71, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002794 [H]

Pfam domain/function: PF01940 DUF92 [H]

EC number: NA

Molecular weight: Translated: 28987; Mature: 28987

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLRLLAGFGLSLLVGGLGYWRRSLSLSGWLGAVLIGTLTVGCGSWAWGWLIILFFASSS
CHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LLSKVGKRRKAAVALDKFSKDDRRDLWQAMANGGIPLITALGYAWQPHFAWWALALGATA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHCCCH
TATADTWATEIGTLSKGRPFMLTTFKQVERGRSGAISGLGMAATSLGALLIGLSAWGLTS
HCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHH
LGLGNGQEPQVWFVVAATIGGIAGSLADSLLGATVQQMRWCDHCASETERTIHKCGNQTR
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
HYRGLAWLNNDWVNLISTGAGALVALLIAVLAN
HHCCEEEECCHHHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLRLLAGFGLSLLVGGLGYWRRSLSLSGWLGAVLIGTLTVGCGSWAWGWLIILFFASSS
CHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LLSKVGKRRKAAVALDKFSKDDRRDLWQAMANGGIPLITALGYAWQPHFAWWALALGATA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHCCCH
TATADTWATEIGTLSKGRPFMLTTFKQVERGRSGAISGLGMAATSLGALLIGLSAWGLTS
HCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHH
LGLGNGQEPQVWFVVAATIGGIAGSLADSLLGATVQQMRWCDHCASETERTIHKCGNQTR
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
HYRGLAWLNNDWVNLISTGAGALVALLIAVLAN
HHCCEEEECCHHHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]