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The map label for this gene is speB1 [H]

Identifier: 159901368

GI number: 159901368

Start: 6192116

End: 6193018

Strand: Reverse

Name: speB1 [H]

Synonym: Haur_4857

Alternate gene names: 159901368

Gene position: 6193018-6192116 (Counterclockwise)

Preceding gene: 159901373

Following gene: 159901367

Centisome position: 97.58

GC content: 48.84

Gene sequence:

>903_bases
ATGACCCATACTACTCCCGATAATTTTTTGGGCTTAGATCAGCAGTATAGCACGCTGGAGACCAGCAAAGTGGTAGTTTT
GCCCATCCCCTTTGAGGCTACTGTGAGTTATGGCGGTGGCACGGTCAATGGGCCAAGCGCGATTATCGAGGCTTCGCAAC
AGGTCGAATTTTATGATCGTGAATTCGATACTGAGCCAGCCAAAAATTGGGGCGTGCACACCTTGCCCAGCGTCGAGGTC
AACGATCAAGACCCTGATAGCGCTATGCAAAGCATCGCCCAAGCAGTTGAAGCAACCGCACGGTTGGGCAAATTGGTGTG
TGTACTGGGCGGCGAGCATTCAGTTTCAGGCGCGGTCGCGCAAGGTCTCCACGCAGTACATGGCGATTTTGTGACGGTGC
AAATTGATGCTCACGCCGATTTGCGCGATCAATATGAGGGCAGCAAACACTCCCACGCTTGTGCCATGCACCGAATTCTC
GATGTTGGCGCTGGCGATTTGTTGCAATTGGGCATTCGATCATTGGATATCAGCGAAGCCCATATGATCAAAACTGACCC
ACGGATTACGACTTTTTATAGTGAACATGTGCATGATGGGCTACATTTGCCAGCCTTGCGCGATTTTGTACGGGGCAAAC
AAGTCTATTTTACAATCGATATTGATGGCTTAGATGTTGGTTTAGTACCTGCGACTGGCACGCCTGAACCCGATGGCCTG
ACATGGCGCGAAGTACTCGAAATTACCCGTATTCTAGTGCAAGAATCGGCCAAGGTCGTGGCCTTTGATATAATGGAATT
AGCACCAATTGAAAATTTACATTCGCCAAATTTTGTTAGTGCCAAGCTCACCTACAAGGTTATGAGCATTATCATGGCCA
AACAAGCTGATTTATGGCAATAG

Upstream 100 bases:

>100_bases
CCGTTTGTCTCGTACAATGGTGATTATACCCGTTTCTGCGGTTGGCTTCTATGGTTCTCTTTATAGTTCTTAATAGTACT
TTTGTGGAATGAGGAACACG

Downstream 100 bases:

>100_bases
TTTAAGTTGATTAATCATCACAACCCTGCCTAACATAAACCCGATTGATGATTAATCGCCATTACTTGCCATAAGTTTGA
GCGCAGCACCACAACGAACA

Product: putative agmatinase

Products: NA

Alternate protein names: Agmatine ureohydrolase 1; AUH 1 [H]

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MTHTTPDNFLGLDQQYSTLETSKVVVLPIPFEATVSYGGGTVNGPSAIIEASQQVEFYDREFDTEPAKNWGVHTLPSVEV
NDQDPDSAMQSIAQAVEATARLGKLVCVLGGEHSVSGAVAQGLHAVHGDFVTVQIDAHADLRDQYEGSKHSHACAMHRIL
DVGAGDLLQLGIRSLDISEAHMIKTDPRITTFYSEHVHDGLHLPALRDFVRGKQVYFTIDIDGLDVGLVPATGTPEPDGL
TWREVLEITRILVQESAKVVAFDIMELAPIENLHSPNFVSAKLTYKVMSIIMAKQADLWQ

Sequences:

>Translated_300_residues
MTHTTPDNFLGLDQQYSTLETSKVVVLPIPFEATVSYGGGTVNGPSAIIEASQQVEFYDREFDTEPAKNWGVHTLPSVEV
NDQDPDSAMQSIAQAVEATARLGKLVCVLGGEHSVSGAVAQGLHAVHGDFVTVQIDAHADLRDQYEGSKHSHACAMHRIL
DVGAGDLLQLGIRSLDISEAHMIKTDPRITTFYSEHVHDGLHLPALRDFVRGKQVYFTIDIDGLDVGLVPATGTPEPDGL
TWREVLEITRILVQESAKVVAFDIMELAPIENLHSPNFVSAKLTYKVMSIIMAKQADLWQ
>Mature_299_residues
THTTPDNFLGLDQQYSTLETSKVVVLPIPFEATVSYGGGTVNGPSAIIEASQQVEFYDREFDTEPAKNWGVHTLPSVEVN
DQDPDSAMQSIAQAVEATARLGKLVCVLGGEHSVSGAVAQGLHAVHGDFVTVQIDAHADLRDQYEGSKHSHACAMHRILD
VGAGDLLQLGIRSLDISEAHMIKTDPRITTFYSEHVHDGLHLPALRDFVRGKQVYFTIDIDGLDVGLVPATGTPEPDGLT
WREVLEITRILVQESAKVVAFDIMELAPIENLHSPNFVSAKLTYKVMSIIMAKQADLWQ

Specific function: Catalyzes The Formation Of Putrescine From Agmatine. [C]

COG id: COG0010

COG function: function code E; Arginase/agmatinase/formimionoglutamate hydrolase, arginase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arginase family. Agmatinase subfamily [H]

Homologues:

Organism=Homo sapiens, GI37537722, Length=271, Percent_Identity=26.5682656826568, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI10947139, Length=267, Percent_Identity=26.5917602996255, Blast_Score=79, Evalue=4e-15,
Organism=Escherichia coli, GI1789306, Length=275, Percent_Identity=24.7272727272727, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005925
- InterPro:   IPR006035
- InterPro:   IPR020855 [H]

Pfam domain/function: PF00491 Arginase [H]

EC number: =3.5.3.11 [H]

Molecular weight: Translated: 32763; Mature: 32632

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHTTPDNFLGLDQQYSTLETSKVVVLPIPFEATVSYGGGTVNGPSAIIEASQQVEFYDR
CCCCCCCHHCCCCCHHHHHCCCCEEEEECCHHEEEECCCCCCCCHHHHHHHHHHHHHHHH
EFDTEPAKNWGVHTLPSVEVNDQDPDSAMQSIAQAVEATARLGKLVCVLGGEHSVSGAVA
CCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHH
QGLHAVHGDFVTVQIDAHADLRDQYEGSKHSHACAMHRILDVGAGDLLQLGIRSLDISEA
HHHHHHCCCEEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC
HMIKTDPRITTFYSEHVHDGLHLPALRDFVRGKQVYFTIDIDGLDVGLVPATGTPEPDGL
EEEECCCCEEEEEHHHHCCCCCCHHHHHHHCCCEEEEEEEECCCEEEEECCCCCCCCCCC
TWREVLEITRILVQESAKVVAFDIMELAPIENLHSPNFVSAKLTYKVMSIIMAKQADLWQ
CHHHHHHHHHHHHHCCCCEEEEHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
THTTPDNFLGLDQQYSTLETSKVVVLPIPFEATVSYGGGTVNGPSAIIEASQQVEFYDR
CCCCCCHHCCCCCHHHHHCCCCEEEEECCHHEEEECCCCCCCCHHHHHHHHHHHHHHHH
EFDTEPAKNWGVHTLPSVEVNDQDPDSAMQSIAQAVEATARLGKLVCVLGGEHSVSGAVA
CCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHH
QGLHAVHGDFVTVQIDAHADLRDQYEGSKHSHACAMHRILDVGAGDLLQLGIRSLDISEA
HHHHHHCCCEEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC
HMIKTDPRITTFYSEHVHDGLHLPALRDFVRGKQVYFTIDIDGLDVGLVPATGTPEPDGL
EEEECCCCEEEEEHHHHCCCCCCHHHHHHHCCCEEEEEEEECCCEEEEECCCCCCCCCCC
TWREVLEITRILVQESAKVVAFDIMELAPIENLHSPNFVSAKLTYKVMSIIMAKQADLWQ
CHHHHHHHHHHHHHCCCCEEEEHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]