| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901328
Identifier: 159901328
GI number: 159901328
Start: 6144372
End: 6145175
Strand: Reverse
Name: 159901328
Synonym: Haur_4817
Alternate gene names: NA
Gene position: 6145175-6144372 (Counterclockwise)
Preceding gene: 159901329
Following gene: 159901327
Centisome position: 96.83
GC content: 47.76
Gene sequence:
>804_bases ATGCAATGTCCTCAATGTTCCGCCGCTGTGGCTGATAGCAGTCGGTTTTGTACCTCGTGTGGGGCGACAATCACCCAACC TGCTGCCGTCGATAAAACCATGGCCTTGCCCAACTTGCCACCAATGGCTAATCCAGTTGATAAAACTCAAGCTATCAATC CGACCCAAGTGCCAACTGTCCAACCAAATTATGGCCCGCCAGCGCCAGTTCAATCGAATTATGGCCCACCAGCCCCACCC AATGTCTATCCGCAACAAGGCTTTAGCCAACCTCAAAACTATGGCCAGCTGCCACCAGCAAATTATGGTCAAGCGCCGAT GGGCTATGCAGTGCCCAACCAATCAGGCTATGCGGCGATTCCCGCAGGCAATGGCAGTATTCCCGCAATTTTGATGATTG TGAGTGCCTTGGCAATTTTGATTGGGGCATTTCTGCCGATGATCGACACCGACACTGTTACTGAAAGTTTATTTCAAGTG CTGAGTTATGCCGATGAGCCTAGTTCGCAAGATATGAATAACTATCAAGCGGTGATTGCGATTCTCTACGGAATTCCAAT TTGTGCAGGTTTGGGTATGCTCATGGGCATGTTGGCCTATTTCAAACGGCGCAATCTGTGGGGCGTTTTGAATCTGATTA TTGCAATTATTGCCTTTGGCTGTAGTGGAATTATCGTTCTGGGAGCCGTAGCAAGTAACGTTACCAACGAAATGGGCAGT GGTTTGTGGTTAATGTTTCTTAGCTCAATTTTCTTATTCGTTACAAGCATTGCCTTTTTGATTCGAAAGAAGCAGCCACG CTAA
Upstream 100 bases:
>100_bases GTCCTGGGTTTGGCCTTTGGCTTGGCTTATTCGGTAGTTTTACTTTGACGGCCTCAAGCCTGATGTCTCAATTCTTGACC AGAAAATGAAAGGAAACGCG
Downstream 100 bases:
>100_bases TATGTTGTTATCTGTTGCTATGATTGCTCGTGATGAAGAGCGCCATATCGGGGCTGCGTTGGCCTCAATCGGCGATTTGG CCGATGAAATTGTGGTCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MQCPQCSAAVADSSRFCTSCGATITQPAAVDKTMALPNLPPMANPVDKTQAINPTQVPTVQPNYGPPAPVQSNYGPPAPP NVYPQQGFSQPQNYGQLPPANYGQAPMGYAVPNQSGYAAIPAGNGSIPAILMIVSALAILIGAFLPMIDTDTVTESLFQV LSYADEPSSQDMNNYQAVIAILYGIPICAGLGMLMGMLAYFKRRNLWGVLNLIIAIIAFGCSGIIVLGAVASNVTNEMGS GLWLMFLSSIFLFVTSIAFLIRKKQPR
Sequences:
>Translated_267_residues MQCPQCSAAVADSSRFCTSCGATITQPAAVDKTMALPNLPPMANPVDKTQAINPTQVPTVQPNYGPPAPVQSNYGPPAPP NVYPQQGFSQPQNYGQLPPANYGQAPMGYAVPNQSGYAAIPAGNGSIPAILMIVSALAILIGAFLPMIDTDTVTESLFQV LSYADEPSSQDMNNYQAVIAILYGIPICAGLGMLMGMLAYFKRRNLWGVLNLIIAIIAFGCSGIIVLGAVASNVTNEMGS GLWLMFLSSIFLFVTSIAFLIRKKQPR >Mature_267_residues MQCPQCSAAVADSSRFCTSCGATITQPAAVDKTMALPNLPPMANPVDKTQAINPTQVPTVQPNYGPPAPVQSNYGPPAPP NVYPQQGFSQPQNYGQLPPANYGQAPMGYAVPNQSGYAAIPAGNGSIPAILMIVSALAILIGAFLPMIDTDTVTESLFQV LSYADEPSSQDMNNYQAVIAILYGIPICAGLGMLMGMLAYFKRRNLWGVLNLIIAIIAFGCSGIIVLGAVASNVTNEMGS GLWLMFLSSIFLFVTSIAFLIRKKQPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28250; Mature: 28250
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQCPQCSAAVADSSRFCTSCGATITQPAAVDKTMALPNLPPMANPVDKTQAINPTQVPTV CCCCCCHHHHHCCHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCC QPNYGPPAPVQSNYGPPAPPNVYPQQGFSQPQNYGQLPPANYGQAPMGYAVPNQSGYAAI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE PAGNGSIPAILMIVSALAILIGAFLPMIDTDTVTESLFQVLSYADEPSSQDMNNYQAVIA CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH ILYGIPICAGLGMLMGMLAYFKRRNLWGVLNLIIAIIAFGCSGIIVLGAVASNVTNEMGS HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GLWLMFLSSIFLFVTSIAFLIRKKQPR CHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQCPQCSAAVADSSRFCTSCGATITQPAAVDKTMALPNLPPMANPVDKTQAINPTQVPTV CCCCCCHHHHHCCHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCC QPNYGPPAPVQSNYGPPAPPNVYPQQGFSQPQNYGQLPPANYGQAPMGYAVPNQSGYAAI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE PAGNGSIPAILMIVSALAILIGAFLPMIDTDTVTESLFQVLSYADEPSSQDMNNYQAVIA CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH ILYGIPICAGLGMLMGMLAYFKRRNLWGVLNLIIAIIAFGCSGIIVLGAVASNVTNEMGS HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GLWLMFLSSIFLFVTSIAFLIRKKQPR CHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA