Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901328

Identifier: 159901328

GI number: 159901328

Start: 6144372

End: 6145175

Strand: Reverse

Name: 159901328

Synonym: Haur_4817

Alternate gene names: NA

Gene position: 6145175-6144372 (Counterclockwise)

Preceding gene: 159901329

Following gene: 159901327

Centisome position: 96.83

GC content: 47.76

Gene sequence:

>804_bases
ATGCAATGTCCTCAATGTTCCGCCGCTGTGGCTGATAGCAGTCGGTTTTGTACCTCGTGTGGGGCGACAATCACCCAACC
TGCTGCCGTCGATAAAACCATGGCCTTGCCCAACTTGCCACCAATGGCTAATCCAGTTGATAAAACTCAAGCTATCAATC
CGACCCAAGTGCCAACTGTCCAACCAAATTATGGCCCGCCAGCGCCAGTTCAATCGAATTATGGCCCACCAGCCCCACCC
AATGTCTATCCGCAACAAGGCTTTAGCCAACCTCAAAACTATGGCCAGCTGCCACCAGCAAATTATGGTCAAGCGCCGAT
GGGCTATGCAGTGCCCAACCAATCAGGCTATGCGGCGATTCCCGCAGGCAATGGCAGTATTCCCGCAATTTTGATGATTG
TGAGTGCCTTGGCAATTTTGATTGGGGCATTTCTGCCGATGATCGACACCGACACTGTTACTGAAAGTTTATTTCAAGTG
CTGAGTTATGCCGATGAGCCTAGTTCGCAAGATATGAATAACTATCAAGCGGTGATTGCGATTCTCTACGGAATTCCAAT
TTGTGCAGGTTTGGGTATGCTCATGGGCATGTTGGCCTATTTCAAACGGCGCAATCTGTGGGGCGTTTTGAATCTGATTA
TTGCAATTATTGCCTTTGGCTGTAGTGGAATTATCGTTCTGGGAGCCGTAGCAAGTAACGTTACCAACGAAATGGGCAGT
GGTTTGTGGTTAATGTTTCTTAGCTCAATTTTCTTATTCGTTACAAGCATTGCCTTTTTGATTCGAAAGAAGCAGCCACG
CTAA

Upstream 100 bases:

>100_bases
GTCCTGGGTTTGGCCTTTGGCTTGGCTTATTCGGTAGTTTTACTTTGACGGCCTCAAGCCTGATGTCTCAATTCTTGACC
AGAAAATGAAAGGAAACGCG

Downstream 100 bases:

>100_bases
TATGTTGTTATCTGTTGCTATGATTGCTCGTGATGAAGAGCGCCATATCGGGGCTGCGTTGGCCTCAATCGGCGATTTGG
CCGATGAAATTGTGGTCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MQCPQCSAAVADSSRFCTSCGATITQPAAVDKTMALPNLPPMANPVDKTQAINPTQVPTVQPNYGPPAPVQSNYGPPAPP
NVYPQQGFSQPQNYGQLPPANYGQAPMGYAVPNQSGYAAIPAGNGSIPAILMIVSALAILIGAFLPMIDTDTVTESLFQV
LSYADEPSSQDMNNYQAVIAILYGIPICAGLGMLMGMLAYFKRRNLWGVLNLIIAIIAFGCSGIIVLGAVASNVTNEMGS
GLWLMFLSSIFLFVTSIAFLIRKKQPR

Sequences:

>Translated_267_residues
MQCPQCSAAVADSSRFCTSCGATITQPAAVDKTMALPNLPPMANPVDKTQAINPTQVPTVQPNYGPPAPVQSNYGPPAPP
NVYPQQGFSQPQNYGQLPPANYGQAPMGYAVPNQSGYAAIPAGNGSIPAILMIVSALAILIGAFLPMIDTDTVTESLFQV
LSYADEPSSQDMNNYQAVIAILYGIPICAGLGMLMGMLAYFKRRNLWGVLNLIIAIIAFGCSGIIVLGAVASNVTNEMGS
GLWLMFLSSIFLFVTSIAFLIRKKQPR
>Mature_267_residues
MQCPQCSAAVADSSRFCTSCGATITQPAAVDKTMALPNLPPMANPVDKTQAINPTQVPTVQPNYGPPAPVQSNYGPPAPP
NVYPQQGFSQPQNYGQLPPANYGQAPMGYAVPNQSGYAAIPAGNGSIPAILMIVSALAILIGAFLPMIDTDTVTESLFQV
LSYADEPSSQDMNNYQAVIAILYGIPICAGLGMLMGMLAYFKRRNLWGVLNLIIAIIAFGCSGIIVLGAVASNVTNEMGS
GLWLMFLSSIFLFVTSIAFLIRKKQPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28250; Mature: 28250

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQCPQCSAAVADSSRFCTSCGATITQPAAVDKTMALPNLPPMANPVDKTQAINPTQVPTV
CCCCCCHHHHHCCHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCC
QPNYGPPAPVQSNYGPPAPPNVYPQQGFSQPQNYGQLPPANYGQAPMGYAVPNQSGYAAI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
PAGNGSIPAILMIVSALAILIGAFLPMIDTDTVTESLFQVLSYADEPSSQDMNNYQAVIA
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ILYGIPICAGLGMLMGMLAYFKRRNLWGVLNLIIAIIAFGCSGIIVLGAVASNVTNEMGS
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GLWLMFLSSIFLFVTSIAFLIRKKQPR
CHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQCPQCSAAVADSSRFCTSCGATITQPAAVDKTMALPNLPPMANPVDKTQAINPTQVPTV
CCCCCCHHHHHCCHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCC
QPNYGPPAPVQSNYGPPAPPNVYPQQGFSQPQNYGQLPPANYGQAPMGYAVPNQSGYAAI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
PAGNGSIPAILMIVSALAILIGAFLPMIDTDTVTESLFQVLSYADEPSSQDMNNYQAVIA
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ILYGIPICAGLGMLMGMLAYFKRRNLWGVLNLIIAIIAFGCSGIIVLGAVASNVTNEMGS
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GLWLMFLSSIFLFVTSIAFLIRKKQPR
CHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA