| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901301
Identifier: 159901301
GI number: 159901301
Start: 6104537
End: 6105265
Strand: Direct
Name: 159901301
Synonym: Haur_4789
Alternate gene names: NA
Gene position: 6104537-6105265 (Clockwise)
Preceding gene: 159901300
Following gene: 159901302
Centisome position: 96.19
GC content: 52.95
Gene sequence:
>729_bases ATGGATATTCTCGATACCATCATTGCTAATGCAATTCAACAGTTTGATCTCATCGCTCCAGTTCAGGTGGTTACCCAATT TCCCAGTGTCAATCATCAGTCCATTCAGCTGCGGGCGGCGAATGGCGATTTTGTCATCAAGGTCTATACCACCGATCAGG ATGAAGCAACACGGCGCTATGAACACATGTTGGTGCAGTGGCTCTCATGGCGGCCAGCCTCGTTTACAGTGCCTTTGCCG CTCAGGGGAAGAAGTATCGACTATTCGCACTATGACTATAATAGCGATCGTTTCTATAGTATCACCCCCTACATCGCGGG CGAAACACCCGACTTTCGCATGCATGCGGATGGCCAGTATCACCCATCTATCCAGCAATGGGCCTATGCAATGGGTACGG CACTTGGTGAATTGCAGACGATCCTCCAAGCCCGCCCCGCCCAGCAACGCCGTCCCATGGCCTTGTTTCAATCATTGCTG ACCTATGCCCAACCGCGTTATGATCCGCTTCAACTCTCAGCCGCTCAGGTTGGCGGCTCTTCGGACGATGAAGCCCTGTG GACATGGTGGCGCAGCGAAGCAACCAGACTCATGGCGTTTGTGGCGAATGAATATCCTGACTTGCCCCAGCAACTCTGCC ATAACGACTTTGCTCCGTCCAACCTGCTTATAAGCGATGGGCGGGTGGCAGCGATTCTCGATTTTGAATTTGCCTGCCCA GCGGCATGA
Upstream 100 bases:
>100_bases GTAGCTCGCCGCAACTACGGACGACAACACTCCCCAACCATCGATAACGACGCTGATTTTCGCCGCGAATCATAGATCAT GAGGGAAGGGAGACATATTC
Downstream 100 bases:
>100_bases GCGCTCGACGTGGCAATGGCCTTGTGCATGATCATGCAACTCGATAGCAATCCGGCAAACCCGTGGGCGGTGGCTGAGCA GTTTTGCCGCGGCTATGCCG
Product: putative homoserine kinase type II (protein kinase fold)-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MDILDTIIANAIQQFDLIAPVQVVTQFPSVNHQSIQLRAANGDFVIKVYTTDQDEATRRYEHMLVQWLSWRPASFTVPLP LRGRSIDYSHYDYNSDRFYSITPYIAGETPDFRMHADGQYHPSIQQWAYAMGTALGELQTILQARPAQQRRPMALFQSLL TYAQPRYDPLQLSAAQVGGSSDDEALWTWWRSEATRLMAFVANEYPDLPQQLCHNDFAPSNLLISDGRVAAILDFEFACP AA
Sequences:
>Translated_242_residues MDILDTIIANAIQQFDLIAPVQVVTQFPSVNHQSIQLRAANGDFVIKVYTTDQDEATRRYEHMLVQWLSWRPASFTVPLP LRGRSIDYSHYDYNSDRFYSITPYIAGETPDFRMHADGQYHPSIQQWAYAMGTALGELQTILQARPAQQRRPMALFQSLL TYAQPRYDPLQLSAAQVGGSSDDEALWTWWRSEATRLMAFVANEYPDLPQQLCHNDFAPSNLLISDGRVAAILDFEFACP AA >Mature_242_residues MDILDTIIANAIQQFDLIAPVQVVTQFPSVNHQSIQLRAANGDFVIKVYTTDQDEATRRYEHMLVQWLSWRPASFTVPLP LRGRSIDYSHYDYNSDRFYSITPYIAGETPDFRMHADGQYHPSIQQWAYAMGTALGELQTILQARPAQQRRPMALFQSLL TYAQPRYDPLQLSAAQVGGSSDDEALWTWWRSEATRLMAFVANEYPDLPQQLCHNDFAPSNLLISDGRVAAILDFEFACP AA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27523; Mature: 27523
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDILDTIIANAIQQFDLIAPVQVVTQFPSVNHQSIQLRAANGDFVIKVYTTDQDEATRRY CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCHHHHHHH EHMLVQWLSWRPASFTVPLPLRGRSIDYSHYDYNSDRFYSITPYIAGETPDFRMHADGQY HHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCEECCCCCCEEEECCCCC HPSIQQWAYAMGTALGELQTILQARPAQQRRPMALFQSLLTYAQPRYDPLQLSAAQVGGS CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEHHHHCCCC SDDEALWTWWRSEATRLMAFVANEYPDLPQQLCHNDFAPSNLLISDGRVAAILDFEFACP CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEECCCEEEEEEECCCCC AA CC >Mature Secondary Structure MDILDTIIANAIQQFDLIAPVQVVTQFPSVNHQSIQLRAANGDFVIKVYTTDQDEATRRY CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCHHHHHHH EHMLVQWLSWRPASFTVPLPLRGRSIDYSHYDYNSDRFYSITPYIAGETPDFRMHADGQY HHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCEECCCCCCEEEECCCCC HPSIQQWAYAMGTALGELQTILQARPAQQRRPMALFQSLLTYAQPRYDPLQLSAAQVGGS CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEHHHHCCCC SDDEALWTWWRSEATRLMAFVANEYPDLPQQLCHNDFAPSNLLISDGRVAAILDFEFACP CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEECCCEEEEEEECCCCC AA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA