| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901299
Identifier: 159901299
GI number: 159901299
Start: 6103289
End: 6104059
Strand: Direct
Name: 159901299
Synonym: Haur_4787
Alternate gene names: NA
Gene position: 6103289-6104059 (Clockwise)
Preceding gene: 159901298
Following gene: 159901300
Centisome position: 96.17
GC content: 49.55
Gene sequence:
>771_bases ATGCAGCTTGAGCATTACCCCAGCCGAGAAACCACCATCGAACTCCCATCACTTGCGCTCCTTACGGCTCCAGACGATCA GCGCTCGATTGTTGGCATGGGCACAGTCTTGCGTAAGGTTGATGGCGGCCAAGCAATCATCGGCGTGATCGCGTTTGACC AGCTCTATTTAATTGTTGATAAAAAAGTTGTGCCCTTCATACCCGCCTTGTCCATTCGCCACGAATCGGGAACATTTATG GGCAACCCGAGCATCAACGCTGGCGCAACCAACCTCATCAACACACGCTATTGGAAAGCCCGCCCAGCGATTGTGGCCGC CCTCGATCCGGTTTACGATCAGATTGATGATACTGAACAGAACTTTTGCAGCTACCTAGCCTCCTGCTATGAAGACCTAA GTTGGCGAAAATGGGTGTATGAGCGCTATCAGCCAGCCAAAGAACCCATGAATAACACGCTGAATGAGGCCTTAGAATAT TTATTGAGCCGCCTATCGCCGCATACTCCACTATTCTTTTTTGCCGAAATCATTCAGCAGTTAAGCTGGCTCGTTGATGA GCCGCGCGTGAGTGTGTATCGGATTATGCGCGAATGGCTTACCGCCGATGAGATCGAAAAAGTCAAAGTTGCGCTCTTGA TCGAAGAAGTGCTTTTACTTACTTCCGATGAGGCTTATCAAACAACAGTTGCGCGGATTGTTGGTCGCTGGCCGGAACTT GAGCCAATGTGTTATGAATTTCAACAAATGTGGGAGCGCAATAAACGCTAG
Upstream 100 bases:
>100_bases GTTATCTTGATTCTATGGTAGACGAGACAGATAGCGATGTTCAAAGGACAATTAAGGCTTGGCGTGATTTTTGAATAGAC AATAATCGGAGAGAAGCACG
Downstream 100 bases:
>100_bases CAGCACTCCTTGCTAGCTAAATTCCCTAACTAATGAGAAAAAATAATGTTTAGGAGCAAGAGCCAGGGTAGGTAGCCCAA AAGGAGAGCTGATGAGTATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MQLEHYPSRETTIELPSLALLTAPDDQRSIVGMGTVLRKVDGGQAIIGVIAFDQLYLIVDKKVVPFIPALSIRHESGTFM GNPSINAGATNLINTRYWKARPAIVAALDPVYDQIDDTEQNFCSYLASCYEDLSWRKWVYERYQPAKEPMNNTLNEALEY LLSRLSPHTPLFFFAEIIQQLSWLVDEPRVSVYRIMREWLTADEIEKVKVALLIEEVLLLTSDEAYQTTVARIVGRWPEL EPMCYEFQQMWERNKR
Sequences:
>Translated_256_residues MQLEHYPSRETTIELPSLALLTAPDDQRSIVGMGTVLRKVDGGQAIIGVIAFDQLYLIVDKKVVPFIPALSIRHESGTFM GNPSINAGATNLINTRYWKARPAIVAALDPVYDQIDDTEQNFCSYLASCYEDLSWRKWVYERYQPAKEPMNNTLNEALEY LLSRLSPHTPLFFFAEIIQQLSWLVDEPRVSVYRIMREWLTADEIEKVKVALLIEEVLLLTSDEAYQTTVARIVGRWPEL EPMCYEFQQMWERNKR >Mature_256_residues MQLEHYPSRETTIELPSLALLTAPDDQRSIVGMGTVLRKVDGGQAIIGVIAFDQLYLIVDKKVVPFIPALSIRHESGTFM GNPSINAGATNLINTRYWKARPAIVAALDPVYDQIDDTEQNFCSYLASCYEDLSWRKWVYERYQPAKEPMNNTLNEALEY LLSRLSPHTPLFFFAEIIQQLSWLVDEPRVSVYRIMREWLTADEIEKVKVALLIEEVLLLTSDEAYQTTVARIVGRWPEL EPMCYEFQQMWERNKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29595; Mature: 29595
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLEHYPSRETTIELPSLALLTAPDDQRSIVGMGTVLRKVDGGQAIIGVIAFDQLYLIVD CCCCCCCCCCCEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHEEC KKVVPFIPALSIRHESGTFMGNPSINAGATNLINTRYWKARPAIVAALDPVYDQIDDTEQ CCHHCCCCCCEEECCCCCEECCCCCCCCCHHHHHCCHHCCCCHHHHHHHHHHHHHCCHHH NFCSYLASCYEDLSWRKWVYERYQPAKEPMNNTLNEALEYLLSRLSPHTPLFFFAEIIQQ HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LSWLVDEPRVSVYRIMREWLTADEIEKVKVALLIEEVLLLTSDEAYQTTVARIVGRWPEL HHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC EPMCYEFQQMWERNKR CHHHHHHHHHHHHCCC >Mature Secondary Structure MQLEHYPSRETTIELPSLALLTAPDDQRSIVGMGTVLRKVDGGQAIIGVIAFDQLYLIVD CCCCCCCCCCCEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHEEC KKVVPFIPALSIRHESGTFMGNPSINAGATNLINTRYWKARPAIVAALDPVYDQIDDTEQ CCHHCCCCCCEEECCCCCEECCCCCCCCCHHHHHCCHHCCCCHHHHHHHHHHHHHCCHHH NFCSYLASCYEDLSWRKWVYERYQPAKEPMNNTLNEALEYLLSRLSPHTPLFFFAEIIQQ HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LSWLVDEPRVSVYRIMREWLTADEIEKVKVALLIEEVLLLTSDEAYQTTVARIVGRWPEL HHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC EPMCYEFQQMWERNKR CHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA