| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901296
Identifier: 159901296
GI number: 159901296
Start: 6100307
End: 6101254
Strand: Direct
Name: 159901296
Synonym: Haur_4784
Alternate gene names: NA
Gene position: 6100307-6101254 (Clockwise)
Preceding gene: 159901291
Following gene: 159901297
Centisome position: 96.12
GC content: 49.58
Gene sequence:
>948_bases ATGAGCTTCGAAACATATGACGACCTCTTTGAAGTGGTATCTGAGCAATACACGGCTCAAAAATATCGCGAAACGCTCGA TCTACTTGATGCAGAGGGAGCGAAATTTCCCGAACATGCATCGATGATTGCCTATCTGCGCTCGTGTATGGCCGCACGGA TTGGCCTGCCCGAACATGCGATTCAAATTCTTAGTGAGGCTGTGGCCCGTGGTTTTTGGTATGGGGCCGAAACGATTCGT CAAACGCCTTCGTGGATTAGCTTGCAAGGCGATCCTGAATTTGAGCGCTTAGCGGCAGTTTGTTTTCAACGCCAATTAGA AGCAGTCAAAGATCCCAAGATGTATATTTTGGGTCCAGATGAGCTAGGGCCGTATCCGCTGTTTTTTGCCTTACACGGCA ACGGCGATAACAGCATGCACACTTTGTATGGCTGGAACAATCTGATCGATATTGATTGGATTTTGGCTGCACCGCAATCC GCTCAGGCTGAATCATCCGATGGCTATGTGTGGAACAATCAATCGGCGGCCTTACGCCAGTTGGTGCAGCAATTTGCCGA TGTTAGCAACGAATACCAAGTTGACCCTGATCGGATTGTCTTGGCTGGTTTTTCGATGGGCGGCGAAACAGCCTTGCGCC TGGCCTTGATTGGGCCAATCGAGGCACGTGGCTTTGTACTGCTTGGTCCAGGCGGCCCGACCATCGACGACCCTGAGGAA TGGTTGCCGGAAATTCGCGAAGCCAAAGGCCGCAATTTGCGCGGCTATATTTTGGTTGGCGAACATGATCGCACAATTCC TCACGACCAAATCAAACGCATGGTCAAACTATTAAATGATAATGGCATTCCCTGCGAGCTGGAAATTATTCCAGGCTTGC GCCATGCCTACCCCAGCAATACCTTGGAATATTTACAACGGGCTTTTAATTTTATTGGGGTTGCCTAA
Upstream 100 bases:
>100_bases TCATAGGACAAAAATCCATGTTTTCGTTCAGAGCGATTAACGCTACAATACGGGCATCGCTCCCCTCGTAGTGATTTTGG CAAAAAGGAGTTCCACGGCG
Downstream 100 bases:
>100_bases ATGCGTTTAGGGTTGTTAGCCGATATTCATGGTGATGGTGTCGGCTTTCAACAGGCCTTGGCTTGGTTTGAGTCTCAGGC GATTGAGCAAATCCTGTGTG
Product: phospholipase/carboxylesterase
Products: NA
Alternate protein names: Alpha/Beta Hydrolase; Group-Specific Protein
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MSFETYDDLFEVVSEQYTAQKYRETLDLLDAEGAKFPEHASMIAYLRSCMAARIGLPEHAIQILSEAVARGFWYGAETIR QTPSWISLQGDPEFERLAAVCFQRQLEAVKDPKMYILGPDELGPYPLFFALHGNGDNSMHTLYGWNNLIDIDWILAAPQS AQAESSDGYVWNNQSAALRQLVQQFADVSNEYQVDPDRIVLAGFSMGGETALRLALIGPIEARGFVLLGPGGPTIDDPEE WLPEIREAKGRNLRGYILVGEHDRTIPHDQIKRMVKLLNDNGIPCELEIIPGLRHAYPSNTLEYLQRAFNFIGVA
Sequences:
>Translated_315_residues MSFETYDDLFEVVSEQYTAQKYRETLDLLDAEGAKFPEHASMIAYLRSCMAARIGLPEHAIQILSEAVARGFWYGAETIR QTPSWISLQGDPEFERLAAVCFQRQLEAVKDPKMYILGPDELGPYPLFFALHGNGDNSMHTLYGWNNLIDIDWILAAPQS AQAESSDGYVWNNQSAALRQLVQQFADVSNEYQVDPDRIVLAGFSMGGETALRLALIGPIEARGFVLLGPGGPTIDDPEE WLPEIREAKGRNLRGYILVGEHDRTIPHDQIKRMVKLLNDNGIPCELEIIPGLRHAYPSNTLEYLQRAFNFIGVA >Mature_314_residues SFETYDDLFEVVSEQYTAQKYRETLDLLDAEGAKFPEHASMIAYLRSCMAARIGLPEHAIQILSEAVARGFWYGAETIRQ TPSWISLQGDPEFERLAAVCFQRQLEAVKDPKMYILGPDELGPYPLFFALHGNGDNSMHTLYGWNNLIDIDWILAAPQSA QAESSDGYVWNNQSAALRQLVQQFADVSNEYQVDPDRIVLAGFSMGGETALRLALIGPIEARGFVLLGPGGPTIDDPEEW LPEIREAKGRNLRGYILVGEHDRTIPHDQIKRMVKLLNDNGIPCELEIIPGLRHAYPSNTLEYLQRAFNFIGVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35346; Mature: 35215
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFETYDDLFEVVSEQYTAQKYRETLDLLDAEGAKFPEHASMIAYLRSCMAARIGLPEHA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHH IQILSEAVARGFWYGAETIRQTPSWISLQGDPEFERLAAVCFQRQLEAVKDPKMYILGPD HHHHHHHHHHHHHCCHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCC ELGPYPLFFALHGNGDNSMHTLYGWNNLIDIDWILAAPQSAQAESSDGYVWNNQSAALRQ CCCCCEEEEEEECCCCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCCEEECCCHHHHHH LVQQFADVSNEYQVDPDRIVLAGFSMGGETALRLALIGPIEARGFVLLGPGGPTIDDPEE HHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCHHH WLPEIREAKGRNLRGYILVGEHDRTIPHDQIKRMVKLLNDNGIPCELEIIPGLRHAYPSN HHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCH TLEYLQRAFNFIGVA HHHHHHHHHHHHCCC >Mature Secondary Structure SFETYDDLFEVVSEQYTAQKYRETLDLLDAEGAKFPEHASMIAYLRSCMAARIGLPEHA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHH IQILSEAVARGFWYGAETIRQTPSWISLQGDPEFERLAAVCFQRQLEAVKDPKMYILGPD HHHHHHHHHHHHHCCHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCC ELGPYPLFFALHGNGDNSMHTLYGWNNLIDIDWILAAPQSAQAESSDGYVWNNQSAALRQ CCCCCEEEEEEECCCCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCCEEECCCHHHHHH LVQQFADVSNEYQVDPDRIVLAGFSMGGETALRLALIGPIEARGFVLLGPGGPTIDDPEE HHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCHHH WLPEIREAKGRNLRGYILVGEHDRTIPHDQIKRMVKLLNDNGIPCELEIIPGLRHAYPSN HHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCH TLEYLQRAFNFIGVA HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA