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The map label for this gene is rtpR [H]

Identifier: 159901278

GI number: 159901278

Start: 6075071

End: 6077338

Strand: Reverse

Name: rtpR [H]

Synonym: Haur_4766

Alternate gene names: 159901278

Gene position: 6077338-6075071 (Counterclockwise)

Preceding gene: 159901280

Following gene: 159901277

Centisome position: 95.76

GC content: 52.29

Gene sequence:

>2268_bases
ATGACGGAACAGGTCACGTTGACCCCGCTCGATGACCGCCAAGTAGCGCCGCCAACCACAATCATCAAGCGTGATGGTCG
TGAGGTGACGTTTGATGTGGCGCGGATTGAACGCGCTTTGACCCGCTGTTTTGCTGGTTTAGGCCGTCAACCGCATACCA
CCGTTGCCGAATTGGCTCAGCGCGTGGTCAATATTTTGGCTGCCAAATATACCACGACTCCAACCGTCGAGGCCGTGCAA
GATACGGTTGAGGTGATGTTGCAAGCTGCTGGCGAGTTTGAAGCTGCCAAGAGCTATATTCTCTATCGCGCCGAGCATGC
CAAAAAGCGAGAGCAACGCCCTGTCCCAGAAGCAATTCGCCATGCGTTTGCCGAATCTGATCAATATTTTCCCTCGCCAT
TGCAAAAATTCCAATTCTTCGATAAATACTCGCGCTTCGATTACGATTTAGGTCGCCGCGAAACTTGGATCGAAACAGTC
GATCGCTCGGTTAATTTCTTGCGCGAAATTTCCGACAATAAACTTGATGATGCCGATTACAACCGCGTGCGCCAAGCTAT
TCTCGAAATGCGGGCGATGCCTTCGATGCGCTTGTTGGCGATGGCGGGGCCGGCTGCCCGCCGCAACAATATTGCCATCT
ATAACTGCTCGTATTTACCAGTTGATAGCATCGACTCATTTGTTGAAGCGTTGATTATTTCGATGAGCGGTTGTGGCGTG
GGTTTCTCAGTCGAACATAAGTACATCGAGCAATTCCCTCGGGTCAAGCGTCAATCTGGCGCACCAGCTACCCAATATGT
GGTCGAAGATTCGGCTGAGGGCTGGGCTGACGCACTGCGCTTTGGCTTAGAAACCTGGTTCGCTGGCAATGATGTAACCT
TTGATCTTTCGCAATTACGGCCTGCTGGCGCTCCCTTGCGGATCAAAGGTGGCCGTGCTTCTGGGCCTGAACCGTTCCGC
CAAATGCTCGATTTTGCCCGCTCACGGATTTTGGCTCGTCAAGGCTCGTTCCTACGCTCAATCGATGCCCACGACATTAT
GTGCTCGGTTGGCAATGCAGCGGTCAGCGGCGGCGTGCGACGCACAGCAATGATCAGTCTGTTCGATTATGATGATCACG
ATATGCTGACCGCCAAAGATGGCGATTTCGACCGCGAAAATAGCCAACGCTGGAACGCCAACAACTCAGCAGTTTGGCCA
GCAAGTGGCTTGACCCAACTCGAAATTATTGAGCAAGTCTTGGCGATGGTTAAATCTGGTCGCGGCGAACCAGGGATCTT
CAATCGCCAAAGCGCGATCGATATGCGCCCAAGCCGCCGTAAGCCCGCCGAATTTGGCACGAATCCATGCGGCGAAATTA
TTCTGCGGCCTTACCAGTTTTGTAATTTGACGGCAGCGGTCGCCCGCGCCGACGATACCTTTGAAACCTTGCGCGAAAAA
GTCGAGGTAGCCACGATTATCGGCACAATCCAATCGATGGCGACCCACTTCCCAGGCTTGCGACCTCAGTGGTCGGAAAA
CTGCCAAGAAGAACGCTTGCTTGGCGTAGATATCACTGGCCAAATGGATAGCAAAGTCGCACAAGATCCCGAGGTTCAGC
GCCGTTTGCTGGAAATTGCGGTCGAAGTCAACCGCGAGTATGCCGAAAAGTTGGGCATTAATCAATCGGTATCGATCACC
TGTGTTAAGCCAAGTGGCAATAGCAGCCAACTGCTTGATTGTGCTTCGGGCTTGCACTCACGTTGGGCACCTTATTACAT
TCGCAACGTGCGGGTCAGCACCCACTCGCCAATTTACAAAGTGCTGCGTGATGCAGGCGTGCCGATGGACCCTGAAAATG
GCCAAACCCGTGATGATGCCACGACTTGGGTGGTGCACTTCCCAGTCAAAGCACCCGAAAATGCCATCACGCGCAACAGC
CGTGGGGCGATTGAGCAATGTAACTATTGGTTGCAAAACAAACTCAATTGGACTGAGCACAATCCATCGGTGACGATTAC
CTACAAGCCCGATGAAGTCATGGAAGTCATGAAATGGATTTGGGAAAACCGCGAGGTGATTGGTGGGATGGCCTTCTTGC
CATCGTTTGATGCCAATTATGCCCAAATGCCGTATGTGGAGATTGGCCGCGAAGAATACGAAAAACTGGCGGCAGAATTC
CCGCCAATCGACTTCTCGAAAGTCTATCGCTACGAAGAAGAAGATTTGACCACGGCAGCCCAAGAATTGGCCTGTATGTC
AGGCGCTTGCGAAATCGATTTCTTGTAA

Upstream 100 bases:

>100_bases
AAAGCTAATTTAAATCTTGCTATCAACGGGAACAATCACATTTTGATTGCACCCTTAATTTTTTGTTGTCTTTATTTTGG
ATGTTTGAAAGGACTTGGTT

Downstream 100 bases:

>100_bases
ATTGAATATTCTACCGCTAGAAACAATGAAGGTCGGGATTCCCCGACCTTCATTGTTTCTTATTCCTTACCGCCGACTGA
GAGTAGCATCAGCGGGCTAA

Product: ribonucleoside-triphosphate reductase

Products: NA

Alternate protein names: RTPR [H]

Number of amino acids: Translated: 755; Mature: 754

Protein sequence:

>755_residues
MTEQVTLTPLDDRQVAPPTTIIKRDGREVTFDVARIERALTRCFAGLGRQPHTTVAELAQRVVNILAAKYTTTPTVEAVQ
DTVEVMLQAAGEFEAAKSYILYRAEHAKKREQRPVPEAIRHAFAESDQYFPSPLQKFQFFDKYSRFDYDLGRRETWIETV
DRSVNFLREISDNKLDDADYNRVRQAILEMRAMPSMRLLAMAGPAARRNNIAIYNCSYLPVDSIDSFVEALIISMSGCGV
GFSVEHKYIEQFPRVKRQSGAPATQYVVEDSAEGWADALRFGLETWFAGNDVTFDLSQLRPAGAPLRIKGGRASGPEPFR
QMLDFARSRILARQGSFLRSIDAHDIMCSVGNAAVSGGVRRTAMISLFDYDDHDMLTAKDGDFDRENSQRWNANNSAVWP
ASGLTQLEIIEQVLAMVKSGRGEPGIFNRQSAIDMRPSRRKPAEFGTNPCGEIILRPYQFCNLTAAVARADDTFETLREK
VEVATIIGTIQSMATHFPGLRPQWSENCQEERLLGVDITGQMDSKVAQDPEVQRRLLEIAVEVNREYAEKLGINQSVSIT
CVKPSGNSSQLLDCASGLHSRWAPYYIRNVRVSTHSPIYKVLRDAGVPMDPENGQTRDDATTWVVHFPVKAPENAITRNS
RGAIEQCNYWLQNKLNWTEHNPSVTITYKPDEVMEVMKWIWENREVIGGMAFLPSFDANYAQMPYVEIGREEYEKLAAEF
PPIDFSKVYRYEEEDLTTAAQELACMSGACEIDFL

Sequences:

>Translated_755_residues
MTEQVTLTPLDDRQVAPPTTIIKRDGREVTFDVARIERALTRCFAGLGRQPHTTVAELAQRVVNILAAKYTTTPTVEAVQ
DTVEVMLQAAGEFEAAKSYILYRAEHAKKREQRPVPEAIRHAFAESDQYFPSPLQKFQFFDKYSRFDYDLGRRETWIETV
DRSVNFLREISDNKLDDADYNRVRQAILEMRAMPSMRLLAMAGPAARRNNIAIYNCSYLPVDSIDSFVEALIISMSGCGV
GFSVEHKYIEQFPRVKRQSGAPATQYVVEDSAEGWADALRFGLETWFAGNDVTFDLSQLRPAGAPLRIKGGRASGPEPFR
QMLDFARSRILARQGSFLRSIDAHDIMCSVGNAAVSGGVRRTAMISLFDYDDHDMLTAKDGDFDRENSQRWNANNSAVWP
ASGLTQLEIIEQVLAMVKSGRGEPGIFNRQSAIDMRPSRRKPAEFGTNPCGEIILRPYQFCNLTAAVARADDTFETLREK
VEVATIIGTIQSMATHFPGLRPQWSENCQEERLLGVDITGQMDSKVAQDPEVQRRLLEIAVEVNREYAEKLGINQSVSIT
CVKPSGNSSQLLDCASGLHSRWAPYYIRNVRVSTHSPIYKVLRDAGVPMDPENGQTRDDATTWVVHFPVKAPENAITRNS
RGAIEQCNYWLQNKLNWTEHNPSVTITYKPDEVMEVMKWIWENREVIGGMAFLPSFDANYAQMPYVEIGREEYEKLAAEF
PPIDFSKVYRYEEEDLTTAAQELACMSGACEIDFL
>Mature_754_residues
TEQVTLTPLDDRQVAPPTTIIKRDGREVTFDVARIERALTRCFAGLGRQPHTTVAELAQRVVNILAAKYTTTPTVEAVQD
TVEVMLQAAGEFEAAKSYILYRAEHAKKREQRPVPEAIRHAFAESDQYFPSPLQKFQFFDKYSRFDYDLGRRETWIETVD
RSVNFLREISDNKLDDADYNRVRQAILEMRAMPSMRLLAMAGPAARRNNIAIYNCSYLPVDSIDSFVEALIISMSGCGVG
FSVEHKYIEQFPRVKRQSGAPATQYVVEDSAEGWADALRFGLETWFAGNDVTFDLSQLRPAGAPLRIKGGRASGPEPFRQ
MLDFARSRILARQGSFLRSIDAHDIMCSVGNAAVSGGVRRTAMISLFDYDDHDMLTAKDGDFDRENSQRWNANNSAVWPA
SGLTQLEIIEQVLAMVKSGRGEPGIFNRQSAIDMRPSRRKPAEFGTNPCGEIILRPYQFCNLTAAVARADDTFETLREKV
EVATIIGTIQSMATHFPGLRPQWSENCQEERLLGVDITGQMDSKVAQDPEVQRRLLEIAVEVNREYAEKLGINQSVSITC
VKPSGNSSQLLDCASGLHSRWAPYYIRNVRVSTHSPIYKVLRDAGVPMDPENGQTRDDATTWVVHFPVKAPENAITRNSR
GAIEQCNYWLQNKLNWTEHNPSVTITYKPDEVMEVMKWIWENREVIGGMAFLPSFDANYAQMPYVEIGREEYEKLAAEFP
PIDFSKVYRYEEEDLTTAAQELACMSGACEIDFL

Specific function: Unknown

COG id: COG1372

COG function: function code L; Intein/homing endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class II ribonucleoside-triphosphate reductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000788
- InterPro:   IPR013345 [H]

Pfam domain/function: PF02867 Ribonuc_red_lgC [H]

EC number: =1.17.4.2 [H]

Molecular weight: Translated: 85173; Mature: 85042

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQVTLTPLDDRQVAPPTTIIKRDGREVTFDVARIERALTRCFAGLGRQPHTTVAELAQ
CCCCEEECCCCCCCCCCCHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
RVVNILAAKYTTTPTVEAVQDTVEVMLQAAGEFEAAKSYILYRAEHAKKREQRPVPEAIR
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHEEHHHHHHHHCCCCHHHHH
HAFAESDQYFPSPLQKFQFFDKYSRFDYDLGRRETWIETVDRSVNFLREISDNKLDDADY
HHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH
NRVRQAILEMRAMPSMRLLAMAGPAARRNNIAIYNCSYLPVDSIDSFVEALIISMSGCGV
HHHHHHHHHHHCCCCCEEHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCC
GFSVEHKYIEQFPRVKRQSGAPATQYVVEDSAEGWADALRFGLETWFAGNDVTFDLSQLR
CCCCCHHHHHHHHHHHHHCCCCHHHHEECCCCCHHHHHHHHHHHHHCCCCCCEEEHHHCC
PAGAPLRIKGGRASGPEPFRQMLDFARSRILARQGSFLRSIDAHDIMCSVGNAAVSGGVR
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHCCCCHHHHCCCC
RTAMISLFDYDDHDMLTAKDGDFDRENSQRWNANNSAVWPASGLTQLEIIEQVLAMVKSG
EEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCC
RGEPGIFNRQSAIDMRPSRRKPAEFGTNPCGEIILRPYQFCNLTAAVARADDTFETLREK
CCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHH
VEVATIIGTIQSMATHFPGLRPQWSENCQEERLLGVDITGQMDSKVAQDPEVQRRLLEIA
HHHHHHHHHHHHHHHHCCCCCCCHHCCHHHCCEEEEEECCCCCHHHCCCHHHHHHHHHHH
VEVNREYAEKLGINQSVSITCVKPSGNSSQLLDCASGLHSRWAPYYIRNVRVSTHSPIYK
HHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHH
VLRDAGVPMDPENGQTRDDATTWVVHFPVKAPENAITRNSRGAIEQCNYWLQNKLNWTEH
HHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHCCCCCCCHHHHHHHHHCCCCCCCC
NPSVTITYKPDEVMEVMKWIWENREVIGGMAFLPSFDANYAQMPYVEIGREEYEKLAAEF
CCEEEEEECCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHC
PPIDFSKVYRYEEEDLTTAAQELACMSGACEIDFL
CCCCHHHHHCCCHHHHHHHHHHHHHHCCCCEECCC
>Mature Secondary Structure 
TEQVTLTPLDDRQVAPPTTIIKRDGREVTFDVARIERALTRCFAGLGRQPHTTVAELAQ
CCCEEECCCCCCCCCCCHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
RVVNILAAKYTTTPTVEAVQDTVEVMLQAAGEFEAAKSYILYRAEHAKKREQRPVPEAIR
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHEEHHHHHHHHCCCCHHHHH
HAFAESDQYFPSPLQKFQFFDKYSRFDYDLGRRETWIETVDRSVNFLREISDNKLDDADY
HHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH
NRVRQAILEMRAMPSMRLLAMAGPAARRNNIAIYNCSYLPVDSIDSFVEALIISMSGCGV
HHHHHHHHHHHCCCCCEEHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCC
GFSVEHKYIEQFPRVKRQSGAPATQYVVEDSAEGWADALRFGLETWFAGNDVTFDLSQLR
CCCCCHHHHHHHHHHHHHCCCCHHHHEECCCCCHHHHHHHHHHHHHCCCCCCEEEHHHCC
PAGAPLRIKGGRASGPEPFRQMLDFARSRILARQGSFLRSIDAHDIMCSVGNAAVSGGVR
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHCCCCHHHHCCCC
RTAMISLFDYDDHDMLTAKDGDFDRENSQRWNANNSAVWPASGLTQLEIIEQVLAMVKSG
EEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCC
RGEPGIFNRQSAIDMRPSRRKPAEFGTNPCGEIILRPYQFCNLTAAVARADDTFETLREK
CCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHH
VEVATIIGTIQSMATHFPGLRPQWSENCQEERLLGVDITGQMDSKVAQDPEVQRRLLEIA
HHHHHHHHHHHHHHHHCCCCCCCHHCCHHHCCEEEEEECCCCCHHHCCCHHHHHHHHHHH
VEVNREYAEKLGINQSVSITCVKPSGNSSQLLDCASGLHSRWAPYYIRNVRVSTHSPIYK
HHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHH
VLRDAGVPMDPENGQTRDDATTWVVHFPVKAPENAITRNSRGAIEQCNYWLQNKLNWTEH
HHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHCCCCCCCHHHHHHHHHCCCCCCCC
NPSVTITYKPDEVMEVMKWIWENREVIGGMAFLPSFDANYAQMPYVEIGREEYEKLAAEF
CCEEEEEECCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHC
PPIDFSKVYRYEEEDLTTAAQELACMSGACEIDFL
CCCCHHHHHCCCHHHHHHHHHHHHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA