| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159901247
Identifier: 159901247
GI number: 159901247
Start: 6046018
End: 6046659
Strand: Direct
Name: 159901247
Synonym: Haur_4735
Alternate gene names: NA
Gene position: 6046018-6046659 (Clockwise)
Preceding gene: 159901243
Following gene: 159901248
Centisome position: 95.26
GC content: 52.49
Gene sequence:
>642_bases ATGAATATGCACACTAAAGCAATCCGCTGCGACCGTCTCACCAAAGACTTCGCCTTATACCTGAACGGCGAATTGATCGG TTATAGCAGTTCCTACAGCGAAGGTGAAAGCCGCCTAAATGAGTTGGTCTACGATCTGTTACGCCGCGCCTCCCATGCCG ACATCAGCGATCTGACCCCTGAGGATGCCGAGGTTGCCTTAGAAGTTGTCACGGCTTTGGCTACTGAAGAAACAGTCACC GAAGTTGTTCCTACTGACGCTACTACCCAAGTCGAAGTTAAGTCGATGGCTGACGATGAAAGCGGTAAAGAAACGCACGG TGTACCAGTCTTTTCGTCCACCATCGGCGGTATTGAATGTACTCTTGGAACCGATGGCGCTCTAACAGTCTCCGCAGCCC GTCGCGATGAACCTGCCTACGGACGTTCCCCCGATGATACCGATGCACTCTATCTGTTTCTTACGAAACTCCCCCAAGTT GGGCCATTGCTTGAAGGCACCCACATGGAGCGTCAGCACTTCCTCTATGGCGATATGGAGATCAAGACCAATGACGAGGG GTTTGACGCTGCACCGTCGATTGTTGCCCATCTGGCAAAGGCTCGTCGCGAGAAAGAAACTGTTGCGGCGAACGCAGCTT AA
Upstream 100 bases:
>100_bases TCCTATTGACAGTAAATATTATCAATGATATACTGTCTGTAATAAGTAAACAGTGCTAGGCGCTACCAACACCTTGCACT AATCGAAAGGAACCAAGGCC
Downstream 100 bases:
>100_bases CGATGCAAACGCCAACTAAACGCACTTCCCACAGCGTGTACAACCTTAACTATCATTTGGTGTTTGTTACCAACTATCGG CATTGCGTTCTTAAGGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MNMHTKAIRCDRLTKDFALYLNGELIGYSSSYSEGESRLNELVYDLLRRASHADISDLTPEDAEVALEVVTALATEETVT EVVPTDATTQVEVKSMADDESGKETHGVPVFSSTIGGIECTLGTDGALTVSAARRDEPAYGRSPDDTDALYLFLTKLPQV GPLLEGTHMERQHFLYGDMEIKTNDEGFDAAPSIVAHLAKARREKETVAANAA
Sequences:
>Translated_213_residues MNMHTKAIRCDRLTKDFALYLNGELIGYSSSYSEGESRLNELVYDLLRRASHADISDLTPEDAEVALEVVTALATEETVT EVVPTDATTQVEVKSMADDESGKETHGVPVFSSTIGGIECTLGTDGALTVSAARRDEPAYGRSPDDTDALYLFLTKLPQV GPLLEGTHMERQHFLYGDMEIKTNDEGFDAAPSIVAHLAKARREKETVAANAA >Mature_213_residues MNMHTKAIRCDRLTKDFALYLNGELIGYSSSYSEGESRLNELVYDLLRRASHADISDLTPEDAEVALEVVTALATEETVT EVVPTDATTQVEVKSMADDESGKETHGVPVFSSTIGGIECTLGTDGALTVSAARRDEPAYGRSPDDTDALYLFLTKLPQV GPLLEGTHMERQHFLYGDMEIKTNDEGFDAAPSIVAHLAKARREKETVAANAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23126; Mature: 23126
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMHTKAIRCDRLTKDFALYLNGELIGYSSSYSEGESRLNELVYDLLRRASHADISDLTP CCCCCHHHHHHHHCCCEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC EDAEVALEVVTALATEETVTEVVPTDATTQVEVKSMADDESGKETHGVPVFSSTIGGIEC CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHCCCCCCCCCCCCCEEECCCCCEEE TLGTDGALTVSAARRDEPAYGRSPDDTDALYLFLTKLPQVGPLLEGTHMERQHFLYGDME EECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHEEEECEE IKTNDEGFDAAPSIVAHLAKARREKETVAANAA EEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNMHTKAIRCDRLTKDFALYLNGELIGYSSSYSEGESRLNELVYDLLRRASHADISDLTP CCCCCHHHHHHHHCCCEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC EDAEVALEVVTALATEETVTEVVPTDATTQVEVKSMADDESGKETHGVPVFSSTIGGIEC CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHCCCCCCCCCCCCCEEECCCCCEEE TLGTDGALTVSAARRDEPAYGRSPDDTDALYLFLTKLPQVGPLLEGTHMERQHFLYGDME EECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHEEEECEE IKTNDEGFDAAPSIVAHLAKARREKETVAANAA EEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA