| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159901215
Identifier: 159901215
GI number: 159901215
Start: 6010313
End: 6010975
Strand: Direct
Name: 159901215
Synonym: Haur_4703
Alternate gene names: NA
Gene position: 6010313-6010975 (Clockwise)
Preceding gene: 159901213
Following gene: 159901219
Centisome position: 94.7
GC content: 50.23
Gene sequence:
>663_bases ATGAGCAATGATCAATATTCCAACCAACCGCCGGTTGATCCAAATTATCAACCCTACAACCAAACACCACCGCCCAACCA ACAGCAACCCTATAGCCAAACGCCGCCCAACCAACCGCAACCGTATCAGCCCTACAGCAACCAAGCACCACAATCGTACC AACCACAATCCCAAGGCCAATTTGTGGTGCCAAGCGCCAATCAATTAACCAGTAGCTTCAAAAGTTCATCGCTGGGCCGC CGTTTGGCGATTGGCGGTGGCCTACTGGCATGGATCTGCTACTTCTTGCCATGGTATCACGTGAGCACCGAAATTTTTGG AGTTAGTGATAGCACATCGTTTAATGGGTTGCGTGGTCTTTTACCATGGATGGGCTTTATGGTATTAACCTCAGTCTTGG TAAATCTCCTTGGCCCATTCTTTGGTCAACAGGTCTATCCGCGCTTTCAACGTTCGTTGAATAATTTCTCGTTGGGCAAG GCTGCATTTTTTGGGCTAGCTGCGGCGCTCGGCTTAGCCCTGATTGGTGGATTTATCGTTAGCCCCAGCGATCAAGGAAT TGCTGGCATTGATGCTGGCTTTAGTTTTGGCTTCTATCTCTCAATTCTGGCGTTGGGTACGGCGACCGCTGGCGGCTGGC TGATGCAGCAAAGTGGCGAATAG
Upstream 100 bases:
>100_bases CAAATTGCTACTTGACTCACCTCGATTTGGTGATTAGATTGAACGTATAGCCGCAAGCTGTATGTGGTAGAACCCAGCGT TTATTGATGGAGGATTTACC
Downstream 100 bases:
>100_bases CCTCGCTGATTAATTATTGATGGTGTAATTTGAGCTATGTTCGATTCCCAACCTACGTGCTGAATAATGGTAGGCTGGTT GGGAATCGGCTTTAATCTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSNDQYSNQPPVDPNYQPYNQTPPPNQQQPYSQTPPNQPQPYQPYSNQAPQSYQPQSQGQFVVPSANQLTSSFKSSSLGR RLAIGGGLLAWICYFLPWYHVSTEIFGVSDSTSFNGLRGLLPWMGFMVLTSVLVNLLGPFFGQQVYPRFQRSLNNFSLGK AAFFGLAAALGLALIGGFIVSPSDQGIAGIDAGFSFGFYLSILALGTATAGGWLMQQSGE
Sequences:
>Translated_220_residues MSNDQYSNQPPVDPNYQPYNQTPPPNQQQPYSQTPPNQPQPYQPYSNQAPQSYQPQSQGQFVVPSANQLTSSFKSSSLGR RLAIGGGLLAWICYFLPWYHVSTEIFGVSDSTSFNGLRGLLPWMGFMVLTSVLVNLLGPFFGQQVYPRFQRSLNNFSLGK AAFFGLAAALGLALIGGFIVSPSDQGIAGIDAGFSFGFYLSILALGTATAGGWLMQQSGE >Mature_219_residues SNDQYSNQPPVDPNYQPYNQTPPPNQQQPYSQTPPNQPQPYQPYSNQAPQSYQPQSQGQFVVPSANQLTSSFKSSSLGRR LAIGGGLLAWICYFLPWYHVSTEIFGVSDSTSFNGLRGLLPWMGFMVLTSVLVNLLGPFFGQQVYPRFQRSLNNFSLGKA AFFGLAAALGLALIGGFIVSPSDQGIAGIDAGFSFGFYLSILALGTATAGGWLMQQSGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23866; Mature: 23735
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNDQYSNQPPVDPNYQPYNQTPPPNQQQPYSQTPPNQPQPYQPYSNQAPQSYQPQSQGQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC FVVPSANQLTSSFKSSSLGRRLAIGGGLLAWICYFLPWYHVSTEIFGVSDSTSFNGLRGL EECCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHH LPWMGFMVLTSVLVNLLGPFFGQQVYPRFQRSLNNFSLGKAAFFGLAAALGLALIGGFIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC SPSDQGIAGIDAGFSFGFYLSILALGTATAGGWLMQQSGE CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHCCCCC >Mature Secondary Structure SNDQYSNQPPVDPNYQPYNQTPPPNQQQPYSQTPPNQPQPYQPYSNQAPQSYQPQSQGQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC FVVPSANQLTSSFKSSSLGRRLAIGGGLLAWICYFLPWYHVSTEIFGVSDSTSFNGLRGL EECCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHH LPWMGFMVLTSVLVNLLGPFFGQQVYPRFQRSLNNFSLGKAAFFGLAAALGLALIGGFIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC SPSDQGIAGIDAGFSFGFYLSILALGTATAGGWLMQQSGE CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA