Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901215

Identifier: 159901215

GI number: 159901215

Start: 6010313

End: 6010975

Strand: Direct

Name: 159901215

Synonym: Haur_4703

Alternate gene names: NA

Gene position: 6010313-6010975 (Clockwise)

Preceding gene: 159901213

Following gene: 159901219

Centisome position: 94.7

GC content: 50.23

Gene sequence:

>663_bases
ATGAGCAATGATCAATATTCCAACCAACCGCCGGTTGATCCAAATTATCAACCCTACAACCAAACACCACCGCCCAACCA
ACAGCAACCCTATAGCCAAACGCCGCCCAACCAACCGCAACCGTATCAGCCCTACAGCAACCAAGCACCACAATCGTACC
AACCACAATCCCAAGGCCAATTTGTGGTGCCAAGCGCCAATCAATTAACCAGTAGCTTCAAAAGTTCATCGCTGGGCCGC
CGTTTGGCGATTGGCGGTGGCCTACTGGCATGGATCTGCTACTTCTTGCCATGGTATCACGTGAGCACCGAAATTTTTGG
AGTTAGTGATAGCACATCGTTTAATGGGTTGCGTGGTCTTTTACCATGGATGGGCTTTATGGTATTAACCTCAGTCTTGG
TAAATCTCCTTGGCCCATTCTTTGGTCAACAGGTCTATCCGCGCTTTCAACGTTCGTTGAATAATTTCTCGTTGGGCAAG
GCTGCATTTTTTGGGCTAGCTGCGGCGCTCGGCTTAGCCCTGATTGGTGGATTTATCGTTAGCCCCAGCGATCAAGGAAT
TGCTGGCATTGATGCTGGCTTTAGTTTTGGCTTCTATCTCTCAATTCTGGCGTTGGGTACGGCGACCGCTGGCGGCTGGC
TGATGCAGCAAAGTGGCGAATAG

Upstream 100 bases:

>100_bases
CAAATTGCTACTTGACTCACCTCGATTTGGTGATTAGATTGAACGTATAGCCGCAAGCTGTATGTGGTAGAACCCAGCGT
TTATTGATGGAGGATTTACC

Downstream 100 bases:

>100_bases
CCTCGCTGATTAATTATTGATGGTGTAATTTGAGCTATGTTCGATTCCCAACCTACGTGCTGAATAATGGTAGGCTGGTT
GGGAATCGGCTTTAATCTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MSNDQYSNQPPVDPNYQPYNQTPPPNQQQPYSQTPPNQPQPYQPYSNQAPQSYQPQSQGQFVVPSANQLTSSFKSSSLGR
RLAIGGGLLAWICYFLPWYHVSTEIFGVSDSTSFNGLRGLLPWMGFMVLTSVLVNLLGPFFGQQVYPRFQRSLNNFSLGK
AAFFGLAAALGLALIGGFIVSPSDQGIAGIDAGFSFGFYLSILALGTATAGGWLMQQSGE

Sequences:

>Translated_220_residues
MSNDQYSNQPPVDPNYQPYNQTPPPNQQQPYSQTPPNQPQPYQPYSNQAPQSYQPQSQGQFVVPSANQLTSSFKSSSLGR
RLAIGGGLLAWICYFLPWYHVSTEIFGVSDSTSFNGLRGLLPWMGFMVLTSVLVNLLGPFFGQQVYPRFQRSLNNFSLGK
AAFFGLAAALGLALIGGFIVSPSDQGIAGIDAGFSFGFYLSILALGTATAGGWLMQQSGE
>Mature_219_residues
SNDQYSNQPPVDPNYQPYNQTPPPNQQQPYSQTPPNQPQPYQPYSNQAPQSYQPQSQGQFVVPSANQLTSSFKSSSLGRR
LAIGGGLLAWICYFLPWYHVSTEIFGVSDSTSFNGLRGLLPWMGFMVLTSVLVNLLGPFFGQQVYPRFQRSLNNFSLGKA
AFFGLAAALGLALIGGFIVSPSDQGIAGIDAGFSFGFYLSILALGTATAGGWLMQQSGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23866; Mature: 23735

Theoretical pI: Translated: 7.31; Mature: 7.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNDQYSNQPPVDPNYQPYNQTPPPNQQQPYSQTPPNQPQPYQPYSNQAPQSYQPQSQGQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FVVPSANQLTSSFKSSSLGRRLAIGGGLLAWICYFLPWYHVSTEIFGVSDSTSFNGLRGL
EECCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHH
LPWMGFMVLTSVLVNLLGPFFGQQVYPRFQRSLNNFSLGKAAFFGLAAALGLALIGGFIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
SPSDQGIAGIDAGFSFGFYLSILALGTATAGGWLMQQSGE
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHCCCCC
>Mature Secondary Structure 
SNDQYSNQPPVDPNYQPYNQTPPPNQQQPYSQTPPNQPQPYQPYSNQAPQSYQPQSQGQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FVVPSANQLTSSFKSSSLGRRLAIGGGLLAWICYFLPWYHVSTEIFGVSDSTSFNGLRGL
EECCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHH
LPWMGFMVLTSVLVNLLGPFFGQQVYPRFQRSLNNFSLGKAAFFGLAAALGLALIGGFIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
SPSDQGIAGIDAGFSFGFYLSILALGTATAGGWLMQQSGE
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA