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The map label for this gene is glyQS [H]

Identifier: 159901209

GI number: 159901209

Start: 6001010

End: 6002389

Strand: Direct

Name: glyQS [H]

Synonym: Haur_4697

Alternate gene names: 159901209

Gene position: 6001010-6002389 (Clockwise)

Preceding gene: 159901208

Following gene: 159901210

Centisome position: 94.55

GC content: 51.23

Gene sequence:

>1380_bases
ATGCCAGCAACATCGATGGATGAATTGGTTTCGTTATGCAAGCGGCGCGGGTTTATCTTTCCAGGCTCGGATATTTATGG
CGGTTTGCAAGGCACGTATGATTACGGCCCGTTGGGGATTGAACTCAAAAACAATCTCAAAGCCGCGTGGTGGCGAGCTA
TGGTCTATGAACGCGACGATGTGGAAGGCCTCGATGCCTCAATTTTGACCCATCGTTTGGTGCTACGCCACTCAGGCCAC
GAAGCAACCTTTACCGATCCAATGGTCGATTGTCGCAATTGTAAAAGTCGCTGGCGAGCCGACCAACTCAAAGACAACAA
ATGTGAAAAATGTGGCTCAACCGATTTGACCGAGCCACGTCCATTCAATTTGATGTTCAAAACCGCTGTCGGCCCAATTG
CCGAAGAAGGCTCGTTTGCCTACTTGCGACCCGAAACCGCCCAAGGGATTTTTACCAACTTTAAAAATGTGGTTGATGCC
ACTTCACGCCGTTTGCCGTTTGGCATCGCCCAAATCGGTAAGGCCTTCCGCAACGAAATTACGCCACGCAACTTTATCTT
CCGCGTGCGTGAATTCGAGCAAATGGAGCTTGAATTCTTCGTCCAGCCAGGAACCGACGATGAATGGCATAGCCAATGGG
TTGAAGCTCGCTTGCAATGGTGGCGTGATCAAGGCTTGCTCAGCGAAAATCTGCAAGCCTATCATCAAGCTGGCGATGAA
TTGGCCCACTATGCCAAAGCGACCGTCGATATTCTCTATCAGTTCCCGCATGGTTTGGAAGAACTAGAGGGGATTGCTAA
TCGAACCGACTTCGATCTTGGTTCGCATACCCGTGGTCAAGCCGATTTAGGTTTATCGGCTAAGGTCGATCCCAACGAAG
ATAGCACCGCCAAGCTGACGATTCCGCATCCAGAGACCCAAAAGCCTTTGGTGCCATTCGTGATCGAGCCATCGGCTGGG
GTTGATCGGGGGGTATTGGCGATTTTGACCGAAGCCTTTACCAAAGAAACCTTGGAAAATGGCTCAGAACGGATTGTGCT
CAAGCTCAAGCCACACTTGGCCCCAATCAAGGTAGCGGTCTTGCCGTTGGCTCGCAACAAACCAGAGATCGTTGAAAAAG
CCAAGGCCATCAAATCGTTGTTGATGGCAACTGGGATTGGTCGGATTTTCTACGAAGATACGGGCAACATCGGCAAAGGC
TATCGCCGCCACGATGAAGTTGGTACGCCCTTCTGCGTCACCGTCGATTTCGATACCTTAGGTCGCGGCGATGATGCCAG
CTTGCTGGACACCGTGACCGTGCGCGACCGCGATACGATGAGCCAGGTTCGCATCCATATCAACGAGCTAGCTAGTTATA
TTCGCGAACGTTTGGTGTAA

Upstream 100 bases:

>100_bases
AAAAGGCAAAAATTAACTTCTAGGTTGGCTTCCTCGTCTTTGACTTTCAAGGTCATTTTGCCTTTTGCCCTTTGCCTTTT
GCCTTATACTGGAGGTTTAT

Downstream 100 bases:

>100_bases
TCACTCACTAAATCCAGATCTTCAAGCCAAGCCCATCATTTGGGCTTGGCTTTTTTTGTAGGGATACCAACTGTTAGCAA
GGTGTAAGCTGAGGCTAACC

Product: glycyl-tRNA synthetase

Products: NA

Alternate protein names: Glycine--tRNA ligase; GlyRS [H]

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MPATSMDELVSLCKRRGFIFPGSDIYGGLQGTYDYGPLGIELKNNLKAAWWRAMVYERDDVEGLDASILTHRLVLRHSGH
EATFTDPMVDCRNCKSRWRADQLKDNKCEKCGSTDLTEPRPFNLMFKTAVGPIAEEGSFAYLRPETAQGIFTNFKNVVDA
TSRRLPFGIAQIGKAFRNEITPRNFIFRVREFEQMELEFFVQPGTDDEWHSQWVEARLQWWRDQGLLSENLQAYHQAGDE
LAHYAKATVDILYQFPHGLEELEGIANRTDFDLGSHTRGQADLGLSAKVDPNEDSTAKLTIPHPETQKPLVPFVIEPSAG
VDRGVLAILTEAFTKETLENGSERIVLKLKPHLAPIKVAVLPLARNKPEIVEKAKAIKSLLMATGIGRIFYEDTGNIGKG
YRRHDEVGTPFCVTVDFDTLGRGDDASLLDTVTVRDRDTMSQVRIHINELASYIRERLV

Sequences:

>Translated_459_residues
MPATSMDELVSLCKRRGFIFPGSDIYGGLQGTYDYGPLGIELKNNLKAAWWRAMVYERDDVEGLDASILTHRLVLRHSGH
EATFTDPMVDCRNCKSRWRADQLKDNKCEKCGSTDLTEPRPFNLMFKTAVGPIAEEGSFAYLRPETAQGIFTNFKNVVDA
TSRRLPFGIAQIGKAFRNEITPRNFIFRVREFEQMELEFFVQPGTDDEWHSQWVEARLQWWRDQGLLSENLQAYHQAGDE
LAHYAKATVDILYQFPHGLEELEGIANRTDFDLGSHTRGQADLGLSAKVDPNEDSTAKLTIPHPETQKPLVPFVIEPSAG
VDRGVLAILTEAFTKETLENGSERIVLKLKPHLAPIKVAVLPLARNKPEIVEKAKAIKSLLMATGIGRIFYEDTGNIGKG
YRRHDEVGTPFCVTVDFDTLGRGDDASLLDTVTVRDRDTMSQVRIHINELASYIRERLV
>Mature_458_residues
PATSMDELVSLCKRRGFIFPGSDIYGGLQGTYDYGPLGIELKNNLKAAWWRAMVYERDDVEGLDASILTHRLVLRHSGHE
ATFTDPMVDCRNCKSRWRADQLKDNKCEKCGSTDLTEPRPFNLMFKTAVGPIAEEGSFAYLRPETAQGIFTNFKNVVDAT
SRRLPFGIAQIGKAFRNEITPRNFIFRVREFEQMELEFFVQPGTDDEWHSQWVEARLQWWRDQGLLSENLQAYHQAGDEL
AHYAKATVDILYQFPHGLEELEGIANRTDFDLGSHTRGQADLGLSAKVDPNEDSTAKLTIPHPETQKPLVPFVIEPSAGV
DRGVLAILTEAFTKETLENGSERIVLKLKPHLAPIKVAVLPLARNKPEIVEKAKAIKSLLMATGIGRIFYEDTGNIGKGY
RRHDEVGTPFCVTVDFDTLGRGDDASLLDTVTVRDRDTMSQVRIHINELASYIRERLV

Specific function: Catalyzes the attachment of glycine to tRNA(Gly) [H]

COG id: COG0423

COG function: function code J; Glycyl-tRNA synthetase (class II)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Homo sapiens, GI116805340, Length=352, Percent_Identity=33.5227272727273, Blast_Score=159, Evalue=7e-39,
Organism=Homo sapiens, GI70887790, Length=463, Percent_Identity=26.9978401727862, Blast_Score=125, Evalue=8e-29,
Organism=Caenorhabditis elegans, GI32564541, Length=599, Percent_Identity=30.0500834724541, Blast_Score=214, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI17554996, Length=599, Percent_Identity=30.0500834724541, Blast_Score=213, Evalue=1e-55,
Organism=Saccharomyces cerevisiae, GI6325338, Length=387, Percent_Identity=29.9741602067183, Blast_Score=137, Evalue=3e-33,
Organism=Saccharomyces cerevisiae, GI6319597, Length=206, Percent_Identity=32.0388349514563, Blast_Score=103, Evalue=8e-23,
Organism=Drosophila melanogaster, GI21357965, Length=350, Percent_Identity=33.7142857142857, Blast_Score=158, Evalue=6e-39,
Organism=Drosophila melanogaster, GI24664462, Length=352, Percent_Identity=33.8068181818182, Blast_Score=158, Evalue=8e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002314
- InterPro:   IPR006195
- InterPro:   IPR004154
- InterPro:   IPR022961
- InterPro:   IPR002315 [H]

Pfam domain/function: PF03129 HGTP_anticodon; PF00587 tRNA-synt_2b [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 51740; Mature: 51609

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS50862 AA_TRNA_LIGASE_II ; PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPATSMDELVSLCKRRGFIFPGSDIYGGLQGTYDYGPLGIELKNNLKAAWWRAMVYERDD
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
VEGLDASILTHRLVLRHSGHEATFTDPMVDCRNCKSRWRADQLKDNKCEKCGSTDLTEPR
CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHHCCCCHHHHCCCCCCCCCC
PFNLMFKTAVGPIAEEGSFAYLRPETAQGIFTNFKNVVDATSRRLPFGIAQIGKAFRNEI
CCCEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
TPRNFIFRVREFEQMELEFFVQPGTDDEWHSQWVEARLQWWRDQGLLSENLQAYHQAGDE
CCHHHHHHHHHHHCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LAHYAKATVDILYQFPHGLEELEGIANRTDFDLGSHTRGQADLGLSAKVDPNEDSTAKLT
HHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
IPHPETQKPLVPFVIEPSAGVDRGVLAILTEAFTKETLENGSERIVLKLKPHLAPIKVAV
ECCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEE
LPLARNKPEIVEKAKAIKSLLMATGIGRIFYEDTGNIGKGYRRHDEVGTPFCVTVDFDTL
EECCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHCCCCCEEEEEEHHCC
GRGDDASLLDTVTVRDRDTMSQVRIHINELASYIRERLV
CCCCCCCHHEEEEECCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PATSMDELVSLCKRRGFIFPGSDIYGGLQGTYDYGPLGIELKNNLKAAWWRAMVYERDD
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
VEGLDASILTHRLVLRHSGHEATFTDPMVDCRNCKSRWRADQLKDNKCEKCGSTDLTEPR
CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHHCCCCHHHHCCCCCCCCCC
PFNLMFKTAVGPIAEEGSFAYLRPETAQGIFTNFKNVVDATSRRLPFGIAQIGKAFRNEI
CCCEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
TPRNFIFRVREFEQMELEFFVQPGTDDEWHSQWVEARLQWWRDQGLLSENLQAYHQAGDE
CCHHHHHHHHHHHCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LAHYAKATVDILYQFPHGLEELEGIANRTDFDLGSHTRGQADLGLSAKVDPNEDSTAKLT
HHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
IPHPETQKPLVPFVIEPSAGVDRGVLAILTEAFTKETLENGSERIVLKLKPHLAPIKVAV
ECCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEE
LPLARNKPEIVEKAKAIKSLLMATGIGRIFYEDTGNIGKGYRRHDEVGTPFCVTVDFDTL
EECCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHCCCCCEEEEEEHHCC
GRGDDASLLDTVTVRDRDTMSQVRIHINELASYIRERLV
CCCCCCCHHEEEEECCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA