| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901203
Identifier: 159901203
GI number: 159901203
Start: 5991161
End: 5993752
Strand: Direct
Name: 159901203
Synonym: Haur_4691
Alternate gene names: NA
Gene position: 5991161-5993752 (Clockwise)
Preceding gene: 159901202
Following gene: 159901204
Centisome position: 94.4
GC content: 51.43
Gene sequence:
>2592_bases ATGTCACGTTATAAATTACAAACGTATCAATTTGGAATTGTCAACGGCTTGCGCCAAGATGTTAGCGATCGCATTAATAG TGCGATGCCCAATAATTTATTTGCACCTGAGGCTCGCAAAGGCCATTTGTTTGTATTAACCGATGCAGTTAATGAAGGTG CACGCGGCAAAGAAGCCTGCGATCTGGTAACCCAAACCATCATCAAAGCATTTTATGCCGATACCTCATTTAGTATTACT TCAGGTTTGCGCAATGCCTTGAAAACTGCTAATACGGCGTTGTATGAGTTTAATTTCAAGGCCGCGCATCACCAAAAAAC TGCGGTTGGTTGTACATGTGCGGTGTTGCGCAACAACGATTTGTATATTGCTCAAGTTCAGCCAACTCAAGCCTATATTG CTCATCGCGGCCAATTACGGGCGTTGCCAACCAATCCATCGTGGCAAGGCAACGTCAGTAGCTCAACAATTATGCCGCCC AACGCGCTTGGCACCAGCCTTTTCAGCGAACCAGAAATGTTTCGCAACGTGGTTGAGGCTGGCGATATGTTGGTGCTCTG TTCGAGCCGTTTGGCGCGGGTGTTAGGTCGGGCTGATGCTGAACGCATGTTTTGTCTTTCCGAGGCAGCGGCTTCGCTGG AAGAATTGTATGCCATTACGCGACGCAATAATTTAAATGAAGCCCACGTTGCGCTGATTGATATGCTGCCGTTTGTTGAC CCAAACAGTGAATTGCTCTCGGCTGAAGGTTTGGCCGAACGCGGCAAGGCTGCGGCCAGCGTGGTTGGCGAATGGATCAG CGATGTAACGGCCAATGCGGCTTTGATGGTGCGCCGCGATAAAGATGATGAAAACGGCGAACCAAGTTCAGCAATCGACG AACTGCCGCCAATGCCTGCCGAACTTGAAGAAGTTGACCCACGCGATATGGGCTGGCTCAACGAGCGCCCGCGCTATCGC CCCCGCAGCTTGCGCGATGCAGAGCAATGGCTGCCTAGCTCATATTTAGGCGAAACCAGCATGGTCGCGGCAATTCAGGC CGCCAGCAGTGCTCCCAGCATCGATTTGACCGACATGGAGCCGTTGCCAATTGATTTTGCCGCCGTGCCCGTGCCACAGC GTGATCCAGTTGTGCCGTTGACTGGCTGGCAAAAATTTACTGCGCCGTTTCGCTATTTGCTCGCAGCAATTGTGACCTTT ATTGCCAATTTCGGACGCAGTAGCCGCCCGATTGCCCCACCACTACCGCGCTTTGCTCAAGCCCGTGGCGGCGATTTGTC GTATCGGCGTTCGCGACGGCGCAACATCCCATGGACGTTAATTGCACTTTTGATTGTGTTAGTTGGTGGCGGTTGGTTCT ATGTACAAGATCGCCGCTTGCAAAATACCGAAGCCGCTTATCAAGATAGTTTGAATGTAGCTAATGCCAAATTTGACGCC GCCGTTCGTGCGACCGATGATCGTGCCGCCTTGGAAGAATTAGGCGAACTTGATACCCATCTCGAAACCTTGGGTAGCGA CCAGGGCTATATGAGCAACCCAACCCGCAAAGCCGATTATCTGGCCTTGCGCAAAAAATCCGATAATTTGCGGGCGAGCA TTGATCGCACCTCGTTCTTGACCGATCTTAAACTGGTGACGACCATGCCAACCAGCGACACGATTGGCAAATTGATTGTC ACGCCCAATACAGGCAAGAACGATCTCTATTTTATTGGCACTGAAAATGGCACGCTCTACAGCTACAGCGAAGGCAGTAG CAGCCCGCCGATCAGCTTATTAAAAGATGGCGATGAAATTGCCGGATTGCCAGCAGCGCCAATTCGCAGCGTCATGTTGC GCGAAGGCGAGCTAGCAGCGATCGATGCCCCGCCGAACCTTAATGCTCAATCGAACATTTATTTCTACTTGAGCGATACC AAAACCTGGGTTTCGCGCACAATTCAAGGCAGCGAACTTTGGACGCGTCAACCATTCCCTGATATCGAGACCTACGGCGG TGGCTTGTATGTCTACGATTTGGGGCGAACTGATAGCGCCACTGCTGGCGAGATTTTGCGCTATCGCTCCGGCGAATTTG CCAACTTGCCCGAAAATTGGATCACCACATCAACTGGCGATTTCAACACCAAATCTGTGGTTGATGTGGCGATTGACGGG CGGATTTATATGCTCCAACCTGATGGCACAGTTGGTATTTTCGAGGGCGGAGCGTTGATCGATACCGTCACAGTGCCAGC GCTTGATCCACCATTACGTGCTCGACGATTGTTCGTTGAGCAAGAAGTGAGTGCTGAAACCTTCCGCGACAATCAAGGCA ATTTCTTCATCGTCGATGCAGTCAATCAGCGCATCGTCGAGGTCAATCGCCAAGGCGAGATTGTGCAACAACTCAAAATG CCGAGCACGAGCACGATCAAGCTGGAATTGCTCAACGATGTTGCTGTGATTGGCAGCGGCTCCAGCAAAATGCTCTATCT GGCCAACAGCAATCGAATCTATTCGATGGTGTTGCCATCGCCGCCGCCACCACGCGAAAGCCTGGGCGGCACAACCACAA CACCAACGGTTCAAATTACACCAACACCATAA
Upstream 100 bases:
>100_bases AGTGGCCAACAACCATGTTTCAATTACGCCGCTGCATTTCGATATGACCAACCTTGATTGGGTGCAACGATTAAGTACTG CGATATGGAATAACGCTTAA
Downstream 100 bases:
>100_bases ATAAAGGGGTTTCATGAAAATCGGGATTATTGGTTTACCCAACAGCGGCAAAACCACAGTTTTTAATGCATTAACCCGCA ATACGGCAGAAACAAATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 863; Mature: 862
Protein sequence:
>863_residues MSRYKLQTYQFGIVNGLRQDVSDRINSAMPNNLFAPEARKGHLFVLTDAVNEGARGKEACDLVTQTIIKAFYADTSFSIT SGLRNALKTANTALYEFNFKAAHHQKTAVGCTCAVLRNNDLYIAQVQPTQAYIAHRGQLRALPTNPSWQGNVSSSTIMPP NALGTSLFSEPEMFRNVVEAGDMLVLCSSRLARVLGRADAERMFCLSEAAASLEELYAITRRNNLNEAHVALIDMLPFVD PNSELLSAEGLAERGKAAASVVGEWISDVTANAALMVRRDKDDENGEPSSAIDELPPMPAELEEVDPRDMGWLNERPRYR PRSLRDAEQWLPSSYLGETSMVAAIQAASSAPSIDLTDMEPLPIDFAAVPVPQRDPVVPLTGWQKFTAPFRYLLAAIVTF IANFGRSSRPIAPPLPRFAQARGGDLSYRRSRRRNIPWTLIALLIVLVGGGWFYVQDRRLQNTEAAYQDSLNVANAKFDA AVRATDDRAALEELGELDTHLETLGSDQGYMSNPTRKADYLALRKKSDNLRASIDRTSFLTDLKLVTTMPTSDTIGKLIV TPNTGKNDLYFIGTENGTLYSYSEGSSSPPISLLKDGDEIAGLPAAPIRSVMLREGELAAIDAPPNLNAQSNIYFYLSDT KTWVSRTIQGSELWTRQPFPDIETYGGGLYVYDLGRTDSATAGEILRYRSGEFANLPENWITTSTGDFNTKSVVDVAIDG RIYMLQPDGTVGIFEGGALIDTVTVPALDPPLRARRLFVEQEVSAETFRDNQGNFFIVDAVNQRIVEVNRQGEIVQQLKM PSTSTIKLELLNDVAVIGSGSSKMLYLANSNRIYSMVLPSPPPPRESLGGTTTTPTVQITPTP
Sequences:
>Translated_863_residues MSRYKLQTYQFGIVNGLRQDVSDRINSAMPNNLFAPEARKGHLFVLTDAVNEGARGKEACDLVTQTIIKAFYADTSFSIT SGLRNALKTANTALYEFNFKAAHHQKTAVGCTCAVLRNNDLYIAQVQPTQAYIAHRGQLRALPTNPSWQGNVSSSTIMPP NALGTSLFSEPEMFRNVVEAGDMLVLCSSRLARVLGRADAERMFCLSEAAASLEELYAITRRNNLNEAHVALIDMLPFVD PNSELLSAEGLAERGKAAASVVGEWISDVTANAALMVRRDKDDENGEPSSAIDELPPMPAELEEVDPRDMGWLNERPRYR PRSLRDAEQWLPSSYLGETSMVAAIQAASSAPSIDLTDMEPLPIDFAAVPVPQRDPVVPLTGWQKFTAPFRYLLAAIVTF IANFGRSSRPIAPPLPRFAQARGGDLSYRRSRRRNIPWTLIALLIVLVGGGWFYVQDRRLQNTEAAYQDSLNVANAKFDA AVRATDDRAALEELGELDTHLETLGSDQGYMSNPTRKADYLALRKKSDNLRASIDRTSFLTDLKLVTTMPTSDTIGKLIV TPNTGKNDLYFIGTENGTLYSYSEGSSSPPISLLKDGDEIAGLPAAPIRSVMLREGELAAIDAPPNLNAQSNIYFYLSDT KTWVSRTIQGSELWTRQPFPDIETYGGGLYVYDLGRTDSATAGEILRYRSGEFANLPENWITTSTGDFNTKSVVDVAIDG RIYMLQPDGTVGIFEGGALIDTVTVPALDPPLRARRLFVEQEVSAETFRDNQGNFFIVDAVNQRIVEVNRQGEIVQQLKM PSTSTIKLELLNDVAVIGSGSSKMLYLANSNRIYSMVLPSPPPPRESLGGTTTTPTVQITPTP >Mature_862_residues SRYKLQTYQFGIVNGLRQDVSDRINSAMPNNLFAPEARKGHLFVLTDAVNEGARGKEACDLVTQTIIKAFYADTSFSITS GLRNALKTANTALYEFNFKAAHHQKTAVGCTCAVLRNNDLYIAQVQPTQAYIAHRGQLRALPTNPSWQGNVSSSTIMPPN ALGTSLFSEPEMFRNVVEAGDMLVLCSSRLARVLGRADAERMFCLSEAAASLEELYAITRRNNLNEAHVALIDMLPFVDP NSELLSAEGLAERGKAAASVVGEWISDVTANAALMVRRDKDDENGEPSSAIDELPPMPAELEEVDPRDMGWLNERPRYRP RSLRDAEQWLPSSYLGETSMVAAIQAASSAPSIDLTDMEPLPIDFAAVPVPQRDPVVPLTGWQKFTAPFRYLLAAIVTFI ANFGRSSRPIAPPLPRFAQARGGDLSYRRSRRRNIPWTLIALLIVLVGGGWFYVQDRRLQNTEAAYQDSLNVANAKFDAA VRATDDRAALEELGELDTHLETLGSDQGYMSNPTRKADYLALRKKSDNLRASIDRTSFLTDLKLVTTMPTSDTIGKLIVT PNTGKNDLYFIGTENGTLYSYSEGSSSPPISLLKDGDEIAGLPAAPIRSVMLREGELAAIDAPPNLNAQSNIYFYLSDTK TWVSRTIQGSELWTRQPFPDIETYGGGLYVYDLGRTDSATAGEILRYRSGEFANLPENWITTSTGDFNTKSVVDVAIDGR IYMLQPDGTVGIFEGGALIDTVTVPALDPPLRARRLFVEQEVSAETFRDNQGNFFIVDAVNQRIVEVNRQGEIVQQLKMP STSTIKLELLNDVAVIGSGSSKMLYLANSNRIYSMVLPSPPPPRESLGGTTTTPTVQITPTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94736; Mature: 94605
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRYKLQTYQFGIVNGLRQDVSDRINSAMPNNLFAPEARKGHLFVLTDAVNEGARGKEAC CCCEEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHH DLVTQTIIKAFYADTSFSITSGLRNALKTANTALYEFNFKAAHHQKTAVGCTCAVLRNND HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEECCHHCCCCCCCCEEEEEEECCC LYIAQVQPTQAYIAHRGQLRALPTNPSWQGNVSSSTIMPPNALGTSLFSEPEMFRNVVEA EEEEEECCHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHH GDMLVLCSSRLARVLGRADAERMFCLSEAAASLEELYAITRRNNLNEAHVALIDMLPFVD CCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC PNSELLSAEGLAERGKAAASVVGEWISDVTANAALMVRRDKDDENGEPSSAIDELPPMPA CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHCCCCCC ELEEVDPRDMGWLNERPRYRPRSLRDAEQWLPSSYLGETSMVAAIQAASSAPSIDLTDME HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCHHHHHHHHHHCCCCCEECCCCC PLPIDFAAVPVPQRDPVVPLTGWQKFTAPFRYLLAAIVTFIANFGRSSRPIAPPLPRFAQ CCCCCEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH ARGGDLSYRRSRRRNIPWTLIALLIVLVGGGWFYVQDRRLQNTEAAYQDSLNVANAKFDA CCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCCEECE AVRATDDRAALEELGELDTHLETLGSDQGYMSNPTRKADYLALRKKSDNLRASIDRTSFL EEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEECCCCCCEEECCHHHHH TDLKLVTTMPTSDTIGKLIVTPNTGKNDLYFIGTENGTLYSYSEGSSSPPISLLKDGDEI HHEEEEEECCCCCCCCEEEECCCCCCCCEEEEECCCCEEEEECCCCCCCCHHHCCCCCHH AGLPAAPIRSVMLREGELAAIDAPPNLNAQSNIYFYLSDTKTWVSRTIQGSELWTRQPFP CCCCCHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCC DIETYGGGLYVYDLGRTDSATAGEILRYRSGEFANLPENWITTSTGDFNTKSVVDVAIDG CHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCEECCCCCCCCCEEEEEEECC RIYMLQPDGTVGIFEGGALIDTVTVPALDPPLRARRLFVEQEVSAETFRDNQGNFFIVDA EEEEECCCCEEEEEECCEEEEEEECCCCCCCHHHHHHHHHHHHCHHHHCCCCCCEEEEEC VNQRIVEVNRQGEIVQQLKMPSTSTIKLELLNDVAVIGSGSSKMLYLANSNRIYSMVLPS CCCCHHHCCCCHHHHHHHCCCCCCEEEEEEECCEEEEECCCCEEEEEECCCEEEEEECCC PPPPRESLGGTTTTPTVQITPTP CCCCHHHCCCCCCCCEEEEECCC >Mature Secondary Structure SRYKLQTYQFGIVNGLRQDVSDRINSAMPNNLFAPEARKGHLFVLTDAVNEGARGKEAC CCEEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHH DLVTQTIIKAFYADTSFSITSGLRNALKTANTALYEFNFKAAHHQKTAVGCTCAVLRNND HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEECCHHCCCCCCCCEEEEEEECCC LYIAQVQPTQAYIAHRGQLRALPTNPSWQGNVSSSTIMPPNALGTSLFSEPEMFRNVVEA EEEEEECCHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHH GDMLVLCSSRLARVLGRADAERMFCLSEAAASLEELYAITRRNNLNEAHVALIDMLPFVD CCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC PNSELLSAEGLAERGKAAASVVGEWISDVTANAALMVRRDKDDENGEPSSAIDELPPMPA CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHCCCCCC ELEEVDPRDMGWLNERPRYRPRSLRDAEQWLPSSYLGETSMVAAIQAASSAPSIDLTDME HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCHHHHHHHHHHCCCCCEECCCCC PLPIDFAAVPVPQRDPVVPLTGWQKFTAPFRYLLAAIVTFIANFGRSSRPIAPPLPRFAQ CCCCCEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH ARGGDLSYRRSRRRNIPWTLIALLIVLVGGGWFYVQDRRLQNTEAAYQDSLNVANAKFDA CCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCCEECE AVRATDDRAALEELGELDTHLETLGSDQGYMSNPTRKADYLALRKKSDNLRASIDRTSFL EEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEECCCCCCEEECCHHHHH TDLKLVTTMPTSDTIGKLIVTPNTGKNDLYFIGTENGTLYSYSEGSSSPPISLLKDGDEI HHEEEEEECCCCCCCCEEEECCCCCCCCEEEEECCCCEEEEECCCCCCCCHHHCCCCCHH AGLPAAPIRSVMLREGELAAIDAPPNLNAQSNIYFYLSDTKTWVSRTIQGSELWTRQPFP CCCCCHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCC DIETYGGGLYVYDLGRTDSATAGEILRYRSGEFANLPENWITTSTGDFNTKSVVDVAIDG CHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCEECCCCCCCCCEEEEEEECC RIYMLQPDGTVGIFEGGALIDTVTVPALDPPLRARRLFVEQEVSAETFRDNQGNFFIVDA EEEEECCCCEEEEEECCEEEEEEECCCCCCCHHHHHHHHHHHHCHHHHCCCCCCEEEEEC VNQRIVEVNRQGEIVQQLKMPSTSTIKLELLNDVAVIGSGSSKMLYLANSNRIYSMVLPS CCCCHHHCCCCHHHHHHHCCCCCCEEEEEEECCEEEEECCCCEEEEEECCCEEEEEECCC PPPPRESLGGTTTTPTVQITPTP CCCCHHHCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA