Click here to switch to the map view.

The map label for this gene is yfiS [H]

Identifier: 159901173

GI number: 159901173

Start: 5958232

End: 5959596

Strand: Reverse

Name: yfiS [H]

Synonym: Haur_4661

Alternate gene names: 159901173

Gene position: 5959596-5958232 (Counterclockwise)

Preceding gene: 159901177

Following gene: 159901172

Centisome position: 93.9

GC content: 53.11

Gene sequence:

>1365_bases
ATGGCTGAAGCAACCAGAAAGCAACCGAGCGGCATGCTCGCATTTAGCATTATGTGGTTTGGCCAAGTCGTTTCATTGCT
TGGCAGCTCCATGAGCAGCTTTGCCCTGACGATTTGGGCTTGGCAAATTACAGGTCAAGCCACAGCCTTGGCGCTCGTAG
GCTTTTTCTCGTTTGCCCCAAGCATTATTGTTAGCCCCTTTGCCGGAGCCTTGGTCGATCGCTGGAATCGTAAGCTGGTG
CTGATTTTGAGCGATTTAGCCACAGGCTTATCGACGATCGCTATTTTATTGCTCTACCACAACGATGTACTGCAAATTTG
GCATTTGTATGTGGCTGGAGCATTTGCCAGCATTTTTCAATCGTTTCAATGGCCAGCCTATTCGGCGGCAGTTTCGACGA
TGTTGCCCAAACAGCACTATGCTCGCGCCAGCGGCATGATGTCGATGGCCGAATCGGCAGCGGGAATTGTCGCGCCAGCC
CTAGCCGGCTTTTTGCTAACCGTAATGGGCATTGGCGGTATCTTGATTATTGATATTGTGACGTTTGTGTTTGCCGTCAG
TGCAGTGCTCTTTGTTAATATTCCCCAACCAACGCAGAGCGAGGCGGGGGCGCAAGGCAAGGGCAGTTTATGGAGCGAGG
CAGGCTTTGGCTTTCGCTATATTTTGGCACGCCCCAGCCTCTTGGGCTTGCAACTGACCTTTTTTATGATTAACTTCGTT
GGTTCGTTTGAAGCCACCATGACCGCTCCCATGATTCTGGCCCGCACCGATAGTAACTCGGCAATTATGGGCACGGTACA
ATCGGCAATGGGCATTGGCGGAGTGATCGGCGGCTTGATCCTGAGTGTCTGGGGCGGCCCCAAACGCAAAGTTCATGGCG
TGCTCGGTGGAATGGCGCTCTCCAGCTTTTTTGGCGGCATTCTCATGGGCTTGGGCCAAAATACGCTGGTTTGGTCGATT
GCGGGCTTTGGTTTGCTATTCGTGCTACCAATGTTGAATGGCTCGAATCAAGCGATTTGGCAAGCCAAAGTGCCACCCGA
TATCCAAGGGCGGGTGTTCGCAGTGCGACGCATGATCGCCCAAATTTCGGGGCCAATCGCAATTTTGATCGTTGGACCAT
TGGCCGACAAAGTGTTTGAGCCACGTATGGCGGTTGGCGGCGCTTGGGTCGATATGTTTGACAGTTGGGTTGGCAGTGGC
AAAGGGGCGGGCATCGCCTTAATTATGGTCTTGAGTGGCATTGTTGGCATCGCCGTAGCCGTGATCGCTTATGGCGTGCG
AGTCGTGCGCCACGCCGAGGATCTAATTCCTGACCATCAAGATAGCCCAAGTAGCAGCCCTGAACTGCAAGCCGAACCAG
CCTAA

Upstream 100 bases:

>100_bases
AAACCCACCCTAGAACTAAAGACTGATATGCAATTATTGGCATAGCGATATACTAATTCAATCAACATTCCAATCTCAAC
CATAACCAGAAGGAGCCGTA

Downstream 100 bases:

>100_bases
AATTGACAATCAATGAGCCAAAACTTGTTACAATCAAATCGATTGATATGCTTCTAGTGTGAGGATATGCAACCCTATGG
CAGATGCAGGTAGCGCTGAA

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 453

Protein sequence:

>454_residues
MAEATRKQPSGMLAFSIMWFGQVVSLLGSSMSSFALTIWAWQITGQATALALVGFFSFAPSIIVSPFAGALVDRWNRKLV
LILSDLATGLSTIAILLLYHNDVLQIWHLYVAGAFASIFQSFQWPAYSAAVSTMLPKQHYARASGMMSMAESAAGIVAPA
LAGFLLTVMGIGGILIIDIVTFVFAVSAVLFVNIPQPTQSEAGAQGKGSLWSEAGFGFRYILARPSLLGLQLTFFMINFV
GSFEATMTAPMILARTDSNSAIMGTVQSAMGIGGVIGGLILSVWGGPKRKVHGVLGGMALSSFFGGILMGLGQNTLVWSI
AGFGLLFVLPMLNGSNQAIWQAKVPPDIQGRVFAVRRMIAQISGPIAILIVGPLADKVFEPRMAVGGAWVDMFDSWVGSG
KGAGIALIMVLSGIVGIAVAVIAYGVRVVRHAEDLIPDHQDSPSSSPELQAEPA

Sequences:

>Translated_454_residues
MAEATRKQPSGMLAFSIMWFGQVVSLLGSSMSSFALTIWAWQITGQATALALVGFFSFAPSIIVSPFAGALVDRWNRKLV
LILSDLATGLSTIAILLLYHNDVLQIWHLYVAGAFASIFQSFQWPAYSAAVSTMLPKQHYARASGMMSMAESAAGIVAPA
LAGFLLTVMGIGGILIIDIVTFVFAVSAVLFVNIPQPTQSEAGAQGKGSLWSEAGFGFRYILARPSLLGLQLTFFMINFV
GSFEATMTAPMILARTDSNSAIMGTVQSAMGIGGVIGGLILSVWGGPKRKVHGVLGGMALSSFFGGILMGLGQNTLVWSI
AGFGLLFVLPMLNGSNQAIWQAKVPPDIQGRVFAVRRMIAQISGPIAILIVGPLADKVFEPRMAVGGAWVDMFDSWVGSG
KGAGIALIMVLSGIVGIAVAVIAYGVRVVRHAEDLIPDHQDSPSSSPELQAEPA
>Mature_453_residues
AEATRKQPSGMLAFSIMWFGQVVSLLGSSMSSFALTIWAWQITGQATALALVGFFSFAPSIIVSPFAGALVDRWNRKLVL
ILSDLATGLSTIAILLLYHNDVLQIWHLYVAGAFASIFQSFQWPAYSAAVSTMLPKQHYARASGMMSMAESAAGIVAPAL
AGFLLTVMGIGGILIIDIVTFVFAVSAVLFVNIPQPTQSEAGAQGKGSLWSEAGFGFRYILARPSLLGLQLTFFMINFVG
SFEATMTAPMILARTDSNSAIMGTVQSAMGIGGVIGGLILSVWGGPKRKVHGVLGGMALSSFFGGILMGLGQNTLVWSIA
GFGLLFVLPMLNGSNQAIWQAKVPPDIQGRVFAVRRMIAQISGPIAILIVGPLADKVFEPRMAVGGAWVDMFDSWVGSGK
GAGIALIMVLSGIVGIAVAVIAYGVRVVRHAEDLIPDHQDSPSSSPELQAEPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47858; Mature: 47727

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEATRKQPSGMLAFSIMWFGQVVSLLGSSMSSFALTIWAWQITGQATALALVGFFSFAP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHEEEEEEEEECCCHHHHHHHHHHHHHH
SIIVSPFAGALVDRWNRKLVLILSDLATGLSTIAILLLYHNDVLQIWHLYVAGAFASIFQ
HHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFQWPAYSAAVSTMLPKQHYARASGMMSMAESAAGIVAPALAGFLLTVMGIGGILIIDIV
HCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
TFVFAVSAVLFVNIPQPTQSEAGAQGKGSLWSEAGFGFRYILARPSLLGLQLTFFMINFV
HHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHH
GSFEATMTAPMILARTDSNSAIMGTVQSAMGIGGVIGGLILSVWGGPKRKVHGVLGGMAL
CCCHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SSFFGGILMGLGQNTLVWSIAGFGLLFVLPMLNGSNQAIWQAKVPPDIQGRVFAVRRMIA
HHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHH
QISGPIAILIVGPLADKVFEPRMAVGGAWVDMFDSWVGSGKGAGIALIMVLSGIVGIAVA
HHCCCEEEEEECCHHHHHHCCHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
VIAYGVRVVRHAEDLIPDHQDSPSSSPELQAEPA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AEATRKQPSGMLAFSIMWFGQVVSLLGSSMSSFALTIWAWQITGQATALALVGFFSFAP
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHEEEEEEEEECCCHHHHHHHHHHHHHH
SIIVSPFAGALVDRWNRKLVLILSDLATGLSTIAILLLYHNDVLQIWHLYVAGAFASIFQ
HHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFQWPAYSAAVSTMLPKQHYARASGMMSMAESAAGIVAPALAGFLLTVMGIGGILIIDIV
HCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
TFVFAVSAVLFVNIPQPTQSEAGAQGKGSLWSEAGFGFRYILARPSLLGLQLTFFMINFV
HHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHH
GSFEATMTAPMILARTDSNSAIMGTVQSAMGIGGVIGGLILSVWGGPKRKVHGVLGGMAL
CCCHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SSFFGGILMGLGQNTLVWSIAGFGLLFVLPMLNGSNQAIWQAKVPPDIQGRVFAVRRMIA
HHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHH
QISGPIAILIVGPLADKVFEPRMAVGGAWVDMFDSWVGSGKGAGIALIMVLSGIVGIAVA
HHCCCEEEEEECCHHHHHHCCHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
VIAYGVRVVRHAEDLIPDHQDSPSSSPELQAEPA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]