Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901165

Identifier: 159901165

GI number: 159901165

Start: 5945780

End: 5946190

Strand: Direct

Name: 159901165

Synonym: Haur_4653

Alternate gene names: NA

Gene position: 5945780-5946190 (Clockwise)

Preceding gene: 159901164

Following gene: 159901166

Centisome position: 93.68

GC content: 42.82

Gene sequence:

>411_bases
ATGAGTCTGATTATTCGTTGGCTGATTAATGCGATTGCAATTGCTGTGACGGTTTATTTAGTGCCTGGGATCAGTGGTGG
GGTTAGCTCAATTGATCAGCCACTGAGCATTGATCTTAAAACCTTATTGGCTGTTAGTTTGATTTTTGGCTTGATCAACG
CCTTGGTTCGGCCAATTCTGAAACTTTTGTCATGTCCACTCGTATTTTTGACGCTCGGTTTGTTTATCTTTGTAATCAAT
GCGGCGATGCTGATGCTCACATCGGCAATCTCGCAAGATTTAGGTCTACAATTTTATGTAGAAGATTTTGGCACAGCATT
GCTTGGGTCGATTGTTATTTCGTTGATTAGTATTGTATTGACCGCTGTTGTCAGCGATGGTGACGATCAACGCGAACGCC
GTCGTCGTTAG

Upstream 100 bases:

>100_bases
TGATTAGTAATCCATTAGCAAACCCTTGATATGGCTGATGCCGCATGCGATAATTGGCTGAGCTGTATAGTAATTGGTTT
GGCATAGGAAGGTTCATGGT

Downstream 100 bases:

>100_bases
AGAAGATGTAGTTGAAGTAAGTAGTCCTTGATTGTGTTGAAAGGAACGCCCTTATGAGTAATCCATACCAACCACAAGAC
CCTAACAATCCTTACGGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MSLIIRWLINAIAIAVTVYLVPGISGGVSSIDQPLSIDLKTLLAVSLIFGLINALVRPILKLLSCPLVFLTLGLFIFVIN
AAMLMLTSAISQDLGLQFYVEDFGTALLGSIVISLISIVLTAVVSDGDDQRERRRR

Sequences:

>Translated_136_residues
MSLIIRWLINAIAIAVTVYLVPGISGGVSSIDQPLSIDLKTLLAVSLIFGLINALVRPILKLLSCPLVFLTLGLFIFVIN
AAMLMLTSAISQDLGLQFYVEDFGTALLGSIVISLISIVLTAVVSDGDDQRERRRR
>Mature_135_residues
SLIIRWLINAIAIAVTVYLVPGISGGVSSIDQPLSIDLKTLLAVSLIFGLINALVRPILKLLSCPLVFLTLGLFIFVINA
AMLMLTSAISQDLGLQFYVEDFGTALLGSIVISLISIVLTAVVSDGDDQRERRRR

Specific function: Unknown

COG id: COG1950

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007165 [H]

Pfam domain/function: PF04020 DUF360 [H]

EC number: NA

Molecular weight: Translated: 14685; Mature: 14554

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLIIRWLINAIAIAVTVYLVPGISGGVSSIDQPLSIDLKTLLAVSLIFGLINALVRPIL
CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KLLSCPLVFLTLGLFIFVINAAMLMLTSAISQDLGLQFYVEDFGTALLGSIVISLISIVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
TAVVSDGDDQRERRRR
HHHHCCCCHHHHHCCC
>Mature Secondary Structure 
SLIIRWLINAIAIAVTVYLVPGISGGVSSIDQPLSIDLKTLLAVSLIFGLINALVRPIL
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KLLSCPLVFLTLGLFIFVINAAMLMLTSAISQDLGLQFYVEDFGTALLGSIVISLISIVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
TAVVSDGDDQRERRRR
HHHHCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8550407; 12000953 [H]