Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901153

Identifier: 159901153

GI number: 159901153

Start: 5929015

End: 5931447

Strand: Reverse

Name: 159901153

Synonym: Haur_4641

Alternate gene names: NA

Gene position: 5931447-5929015 (Counterclockwise)

Preceding gene: 159901154

Following gene: 159901151

Centisome position: 93.46

GC content: 54.05

Gene sequence:

>2433_bases
ATGAAATCTTTTTTTCGTCGGCAACGCCCGACATCCCTCCGCGAACGAGGTAAAGGCAAAGTTCGCTGGACAATCTGGGA
GTTAACAGCGCTGGTTGTTAGCATCGTTATGATGGCAACCCCTTTGTTAGCTGCGATTAGCAGTGCTATTTTTCCATTTA
ATGCTCAGGCGCAAGCCACGATTCGGCCAACGTCAGCAGCAACACCGGTTACGCCGTTACCACCAACCGCCACCCAGACC
TATCCGGTGCCAACCGAAACACCGCTTGTCACGCCGTGTCCAACGTTTGAGCCAACCGAAACACCAACCGAAACCGCCAC
AACCTATCCTACACCTGGCACACCTGGCACACCGACCGATACGCCAAGTGTCACGGATACGCCAACGACAATTATTACGT
CAACCAATACACCAGCTGTGACCGATACGCCGAGCGTCACCGACACCCCAAGTGTGACAGACACGCCGAGCGCACCAACG
GCTACGACGATCATCACACCAACTGAAACCAGTGTTGTAAGCCCAACGATACCCCGTGGTGGGATGAGTGGAAGCACGCG
TTTGCATCGGCCTTTAGCCCAAACGCCTGATCCATGTGCAACACCACCAACGATTGTCATTCCACCAACCGATACCATTC
CACCTGATGAAACACCAACGGGCACAATCACTGGTCCGGTTACACTGACCCCAGCAACGCCAACCATTGATTGTTTGGTT
GCAAGTTGTACGCCAGTTCCAACCCTACCAACTGATATTGCCACGGCAACCGAAACCACCTTGCCAGCCGATGAGCCAAT
CGCGGTGGGCAAGAGTAGTTCGCGGGCGCTCGTGCAGCCTGGCGAAACATTTAGTTATATCATCACGGTAAGTTTCCAAG
ATAATGGCGATGGGCAAACTTCGCGCTCAGTCAGCATTAGCGACCCATTACCAAGCCAGGTAACCTTTATTGCAGTTCAA
CAACTTGGCACAGCGACCTGCGTTGGTGGCACAACCGTCAACTGTAATGGGACGGTCAGTGCAGGTAACCCAATTGTGGT
CACGATTCAAGTCCAAGTTAATGCCAGCGTGGCATTGGGCACGAATATCGTTAATATCGTTAGTGCCACGGCGGCCAATC
GCACGTTGCAAGCAAGCGATACCGTGATTGTGCCTGATACCTTACCAACCAGCACGCTTGGCACAGCTGGCCCAAGCTTC
ACGCCAATTGTTGTGACCAATACACCAATTACGCCAATTGTGACCAATACTCCGATTACGCCAATTGGTGTAACCAATAC
TCCACCTACCAGCACACCAGTCACACCAATTGGTGCAACCAACACACCTGGTGGCTCAACCAGCATACCTGTTACGACTG
GTCCAAGCAATACGCCACGGCCAAACCAGCCGAGCAATACGCCACGGCCAAATCAGCCGAGCAATACGCCACGGCCAAAC
CAGCCGAGCAATACGCCACGGCCAAATCAGCCAAGCAACACACCACAGCCGAATCAGCCAAGCAACACACCACGGCCTGA
TATTACGCCAGTGCCAGCAACCAATGTGCCTGTTGCCACGGTTGTTCCACCAAGCAACCCAAGCGCAACGCCACGCCCAG
GTGTGCCAGTGCCTTCGGCAACTCAGCGCCCAGGCGGTGGTTCAAATCCAAGTGCAACGCCACGGCCAGGCGCACCAGTG
CCTTCGGCTACCAATGCACCAGCTGGCAGCCAACCAACCAATGCACCCGCGCCAGCTACAGCAACGCCAACCAATCCAGC
TGGCTTCGTCACCGATCCAATCGTGACTGGCTTGCAGTTCCAAAAGAAGAGCGATTGGGGCAGCCGCTTTGCAGGCGAAA
GTTTGATTTACACAATCACGATTATCAGCCCAACTAATTCGTTGAATGCTGGTACGATGCGTGATGTCGTGGTGGTTGAT
CAATTGCCAAGCAACTTGGAAACCAATGGCCCAATCAAGGTCAGCGACCAAAATGCACGGGTTGAACAACAAGGCAACCA
AATTACCGTGCGGGTCGGGGTCTTGCCAGCAGGCCAAACCTTGACAATCATGATTCCAGTCAAGATCAAAGATGGTGTGG
CTGCTCAAACGCGGATCGTCAACCAAGCTCAGTTGAATTTCACTGGCTTGGCCCAGCCAATCTATTCGAATATTTCGAGT
GTTTTGGTGGTCGGCGAAGCTCCTGCAGTCAGCGCCACAGCAGTTCCTAAGGGCAATGTCGGCGGCGGTGCTGCAACTGC
CAACCCAGCAACCGTCACGCCAAATACTGGCATTGGCGGCGGCCAAGGTAGTGGCGATGGCACTGGCGCAACCGATGTTG
GGGTTAGCAACCCAGCTACGAATATGGGTATTCCAGCAGCAGGCTTTGTGCTCTTCGCCCTGACGATGTTCGTTCACGTT
ATACGGGTTCGCCGCGAAATGACGCGGATCTAA

Upstream 100 bases:

>100_bases
TACCGCTTGGGACACCCAGCGGTTGGTAGTTAAGGCTCGGCTGATTGATCAGGCAGCGCTCTCCTCTTAATTGCGGAGGC
AATAGATCGAGGGGTTTCGC

Downstream 100 bases:

>100_bases
ACGACAATTTCAACCAAACCAAAACCCCGCTCACGTGAGCGGGGTTTTGGTTTTAGCTTATTTAATCAATACTTGGCGAT
CATGTTCAAATTGCCAATCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 810; Mature: 810

Protein sequence:

>810_residues
MKSFFRRQRPTSLRERGKGKVRWTIWELTALVVSIVMMATPLLAAISSAIFPFNAQAQATIRPTSAATPVTPLPPTATQT
YPVPTETPLVTPCPTFEPTETPTETATTYPTPGTPGTPTDTPSVTDTPTTIITSTNTPAVTDTPSVTDTPSVTDTPSAPT
ATTIITPTETSVVSPTIPRGGMSGSTRLHRPLAQTPDPCATPPTIVIPPTDTIPPDETPTGTITGPVTLTPATPTIDCLV
ASCTPVPTLPTDIATATETTLPADEPIAVGKSSSRALVQPGETFSYIITVSFQDNGDGQTSRSVSISDPLPSQVTFIAVQ
QLGTATCVGGTTVNCNGTVSAGNPIVVTIQVQVNASVALGTNIVNIVSATAANRTLQASDTVIVPDTLPTSTLGTAGPSF
TPIVVTNTPITPIVTNTPITPIGVTNTPPTSTPVTPIGATNTPGGSTSIPVTTGPSNTPRPNQPSNTPRPNQPSNTPRPN
QPSNTPRPNQPSNTPQPNQPSNTPRPDITPVPATNVPVATVVPPSNPSATPRPGVPVPSATQRPGGGSNPSATPRPGAPV
PSATNAPAGSQPTNAPAPATATPTNPAGFVTDPIVTGLQFQKKSDWGSRFAGESLIYTITIISPTNSLNAGTMRDVVVVD
QLPSNLETNGPIKVSDQNARVEQQGNQITVRVGVLPAGQTLTIMIPVKIKDGVAAQTRIVNQAQLNFTGLAQPIYSNISS
VLVVGEAPAVSATAVPKGNVGGGAATANPATVTPNTGIGGGQGSGDGTGATDVGVSNPATNMGIPAAGFVLFALTMFVHV
IRVRREMTRI

Sequences:

>Translated_810_residues
MKSFFRRQRPTSLRERGKGKVRWTIWELTALVVSIVMMATPLLAAISSAIFPFNAQAQATIRPTSAATPVTPLPPTATQT
YPVPTETPLVTPCPTFEPTETPTETATTYPTPGTPGTPTDTPSVTDTPTTIITSTNTPAVTDTPSVTDTPSVTDTPSAPT
ATTIITPTETSVVSPTIPRGGMSGSTRLHRPLAQTPDPCATPPTIVIPPTDTIPPDETPTGTITGPVTLTPATPTIDCLV
ASCTPVPTLPTDIATATETTLPADEPIAVGKSSSRALVQPGETFSYIITVSFQDNGDGQTSRSVSISDPLPSQVTFIAVQ
QLGTATCVGGTTVNCNGTVSAGNPIVVTIQVQVNASVALGTNIVNIVSATAANRTLQASDTVIVPDTLPTSTLGTAGPSF
TPIVVTNTPITPIVTNTPITPIGVTNTPPTSTPVTPIGATNTPGGSTSIPVTTGPSNTPRPNQPSNTPRPNQPSNTPRPN
QPSNTPRPNQPSNTPQPNQPSNTPRPDITPVPATNVPVATVVPPSNPSATPRPGVPVPSATQRPGGGSNPSATPRPGAPV
PSATNAPAGSQPTNAPAPATATPTNPAGFVTDPIVTGLQFQKKSDWGSRFAGESLIYTITIISPTNSLNAGTMRDVVVVD
QLPSNLETNGPIKVSDQNARVEQQGNQITVRVGVLPAGQTLTIMIPVKIKDGVAAQTRIVNQAQLNFTGLAQPIYSNISS
VLVVGEAPAVSATAVPKGNVGGGAATANPATVTPNTGIGGGQGSGDGTGATDVGVSNPATNMGIPAAGFVLFALTMFVHV
IRVRREMTRI
>Mature_810_residues
MKSFFRRQRPTSLRERGKGKVRWTIWELTALVVSIVMMATPLLAAISSAIFPFNAQAQATIRPTSAATPVTPLPPTATQT
YPVPTETPLVTPCPTFEPTETPTETATTYPTPGTPGTPTDTPSVTDTPTTIITSTNTPAVTDTPSVTDTPSVTDTPSAPT
ATTIITPTETSVVSPTIPRGGMSGSTRLHRPLAQTPDPCATPPTIVIPPTDTIPPDETPTGTITGPVTLTPATPTIDCLV
ASCTPVPTLPTDIATATETTLPADEPIAVGKSSSRALVQPGETFSYIITVSFQDNGDGQTSRSVSISDPLPSQVTFIAVQ
QLGTATCVGGTTVNCNGTVSAGNPIVVTIQVQVNASVALGTNIVNIVSATAANRTLQASDTVIVPDTLPTSTLGTAGPSF
TPIVVTNTPITPIVTNTPITPIGVTNTPPTSTPVTPIGATNTPGGSTSIPVTTGPSNTPRPNQPSNTPRPNQPSNTPRPN
QPSNTPRPNQPSNTPQPNQPSNTPRPDITPVPATNVPVATVVPPSNPSATPRPGVPVPSATQRPGGGSNPSATPRPGAPV
PSATNAPAGSQPTNAPAPATATPTNPAGFVTDPIVTGLQFQKKSDWGSRFAGESLIYTITIISPTNSLNAGTMRDVVVVD
QLPSNLETNGPIKVSDQNARVEQQGNQITVRVGVLPAGQTLTIMIPVKIKDGVAAQTRIVNQAQLNFTGLAQPIYSNISS
VLVVGEAPAVSATAVPKGNVGGGAATANPATVTPNTGIGGGQGSGDGTGATDVGVSNPATNMGIPAAGFVLFALTMFVHV
IRVRREMTRI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82647; Mature: 82647

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSFFRRQRPTSLRERGKGKVRWTIWELTALVVSIVMMATPLLAAISSAIFPFNAQAQAT
CCHHHHHCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
IRPTSAATPVTPLPPTATQTYPVPTETPLVTPCPTFEPTETPTETATTYPTPGTPGTPTD
ECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TPSVTDTPTTIITSTNTPAVTDTPSVTDTPSVTDTPSAPTATTIITPTETSVVSPTIPRG
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
GMSGSTRLHRPLAQTPDPCATPPTIVIPPTDTIPPDETPTGTITGPVTLTPATPTIDCLV
CCCCCCHHHCCHHCCCCCCCCCCEEEECCCCCCCCCCCCCCEEECCEEECCCCCCEEEEE
ASCTPVPTLPTDIATATETTLPADEPIAVGKSSSRALVQPGETFSYIITVSFQDNGDGQT
ECCCCCCCCCCCHHCCCCCCCCCCCCEEECCCCCCEEECCCCCEEEEEEEEEECCCCCCC
SRSVSISDPLPSQVTFIAVQQLGTATCVGGTTVNCNGTVSAGNPIVVTIQVQVNASVALG
CCEEEECCCCCCCEEEEEEECCCCEEEECCEEEECCEEEECCCCEEEEEEEEECCEEEEC
TNIVNIVSATAANRTLQASDTVIVPDTLPTSTLGTAGPSFTPIVVTNTPITPIVTNTPIT
CCCEEHHHHHHCCCEEECCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCC
PIGVTNTPPTSTPVTPIGATNTPGGSTSIPVTTGPSNTPRPNQPSNTPRPNQPSNTPRPN
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
QPSNTPRPNQPSNTPQPNQPSNTPRPDITPVPATNVPVATVVPPSNPSATPRPGVPVPSA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC
TQRPGGGSNPSATPRPGAPVPSATNAPAGSQPTNAPAPATATPTNPAGFVTDPIVTGLQF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEE
QKKSDWGSRFAGESLIYTITIISPTNSLNAGTMRDVVVVDQLPSNLETNGPIKVSDQNAR
ECCCCCCHHHCCCEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCEEECCCCCH
VEQQGNQITVRVGVLPAGQTLTIMIPVKIKDGVAAQTRIVNQAQLNFTGLAQPIYSNISS
HHHCCCEEEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHEECCHHHHHHHHHHCCCE
VLVVGEAPAVSATAVPKGNVGGGAATANPATVTPNTGIGGGQGSGDGTGATDVGVSNPAT
EEEECCCCCCEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
NMGIPAAGFVLFALTMFVHVIRVRREMTRI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSFFRRQRPTSLRERGKGKVRWTIWELTALVVSIVMMATPLLAAISSAIFPFNAQAQAT
CCHHHHHCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
IRPTSAATPVTPLPPTATQTYPVPTETPLVTPCPTFEPTETPTETATTYPTPGTPGTPTD
ECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TPSVTDTPTTIITSTNTPAVTDTPSVTDTPSVTDTPSAPTATTIITPTETSVVSPTIPRG
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
GMSGSTRLHRPLAQTPDPCATPPTIVIPPTDTIPPDETPTGTITGPVTLTPATPTIDCLV
CCCCCCHHHCCHHCCCCCCCCCCEEEECCCCCCCCCCCCCCEEECCEEECCCCCCEEEEE
ASCTPVPTLPTDIATATETTLPADEPIAVGKSSSRALVQPGETFSYIITVSFQDNGDGQT
ECCCCCCCCCCCHHCCCCCCCCCCCCEEECCCCCCEEECCCCCEEEEEEEEEECCCCCCC
SRSVSISDPLPSQVTFIAVQQLGTATCVGGTTVNCNGTVSAGNPIVVTIQVQVNASVALG
CCEEEECCCCCCCEEEEEEECCCCEEEECCEEEECCEEEECCCCEEEEEEEEECCEEEEC
TNIVNIVSATAANRTLQASDTVIVPDTLPTSTLGTAGPSFTPIVVTNTPITPIVTNTPIT
CCCEEHHHHHHCCCEEECCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCC
PIGVTNTPPTSTPVTPIGATNTPGGSTSIPVTTGPSNTPRPNQPSNTPRPNQPSNTPRPN
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
QPSNTPRPNQPSNTPQPNQPSNTPRPDITPVPATNVPVATVVPPSNPSATPRPGVPVPSA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC
TQRPGGGSNPSATPRPGAPVPSATNAPAGSQPTNAPAPATATPTNPAGFVTDPIVTGLQF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEE
QKKSDWGSRFAGESLIYTITIISPTNSLNAGTMRDVVVVDQLPSNLETNGPIKVSDQNAR
ECCCCCCHHHCCCEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCEEECCCCCH
VEQQGNQITVRVGVLPAGQTLTIMIPVKIKDGVAAQTRIVNQAQLNFTGLAQPIYSNISS
HHHCCCEEEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHEECCHHHHHHHHHHCCCE
VLVVGEAPAVSATAVPKGNVGGGAATANPATVTPNTGIGGGQGSGDGTGATDVGVSNPAT
EEEECCCCCCEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
NMGIPAAGFVLFALTMFVHVIRVRREMTRI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA