| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901142
Identifier: 159901142
GI number: 159901142
Start: 5916744
End: 5917796
Strand: Reverse
Name: 159901142
Synonym: Haur_4630
Alternate gene names: NA
Gene position: 5917796-5916744 (Counterclockwise)
Preceding gene: 159901143
Following gene: 159901138
Centisome position: 93.24
GC content: 50.81
Gene sequence:
>1053_bases ATGATTCTCGTTGATGCACACCTCGATTTGGCTTATAACGCAATTAACCTTGGCCGCGATTTGACCAAAACCGTGGAACT TGGCCGCCAACGTGCAACCGAACAAACCGTTGAATGGATTGCTGAGGCTGGTACCTTGACCACTACCTTGGCTGAAATTG GCTTGCACACGCCAAGTATTGTGTGTGGCACAATTTTTATTCTGCCAGCGGAAGCCCAAACTACGCTTGATGGCGTGGCC TATGCTACCCCCGACGAAGCCCACGATCAAGCGTGGGAGCAACTAAATTGGTATAAACAACAATGTGCCGCTGGCTTTTT GCACCTTATCGACAATCAACCAGCCCTCCAAGCGATTCAAGCTCGCAACCAATCAGTGCCAGGGTTGGTCTTGTTGATGG AAGGAGCAGATGGCTTGCGCACGCCCGATGAACTAATCGAGTGGTATGCTGCGGGTTTGCGCTGGCTTGGCCCAGCATGG CAAGCAACTCGCTATGCTGGTGGCACTGGTGCACCAGGCTCATTGACCAAATTGGGCTTGGAATTATTGGAATTGATGCA AAGATTAGGCGTGGCGCTCGATGCCAGTCATTTGGCAGAGGAAAGTTTTTGGCAAGCACTTGAGCACTTTCAAGGGCCAA TTGCGGCCTCGCACTCCAATTGTCGCAGCTTATTAGTTGGAGCCAGCCACCAAGATCGCTATTTAAGTGATGAGATGATC AAAGCGATTATTGAGCGTGATGGCGTGATTGGAATTGCACTCTACAACCGTATGCTGCGGGCCGATTGGGATGGTAGCAA AAATCATGTCTCGTTGGAGCATGTGGTGATGCAAATTGAGCATATCTGTCAGCTGGCAGGCAATACGCAGCATGTGGCGC TTGGCTCCGACCTCGACGGTGGCTTTGGAGTTGAGATGATTCCGGCTGAAATTGATCGCTGGAGCGATTTACTAAAGATC GGCCAAGCCTTAGCGAAGCGGGGCTGGCACGAAAATGATATTGCCAAGGTGCTCGGCCAAAATTGGCTGCGTTGGTTTCA ACGAATTATCTAG
Upstream 100 bases:
>100_bases ACAGATGACCCTTGAGCAACTATTAAATCTGATTTCATTGCATATTCGGTTACATCGCAATGAAATCGAAACGGGCCTAC GCTCGCTAGAATGAGGCACC
Downstream 100 bases:
>100_bases GTTGCGGAGTTTGTGATCCACGAAGGACACGAAGATTGAGACTAGCTATGTTGGCCGAAGGCTCTAGGCTATCGAGACAT GAGGTAATAGCTTAATAATT
Product: peptidase M19 renal dipeptidase
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MILVDAHLDLAYNAINLGRDLTKTVELGRQRATEQTVEWIAEAGTLTTTLAEIGLHTPSIVCGTIFILPAEAQTTLDGVA YATPDEAHDQAWEQLNWYKQQCAAGFLHLIDNQPALQAIQARNQSVPGLVLLMEGADGLRTPDELIEWYAAGLRWLGPAW QATRYAGGTGAPGSLTKLGLELLELMQRLGVALDASHLAEESFWQALEHFQGPIAASHSNCRSLLVGASHQDRYLSDEMI KAIIERDGVIGIALYNRMLRADWDGSKNHVSLEHVVMQIEHICQLAGNTQHVALGSDLDGGFGVEMIPAEIDRWSDLLKI GQALAKRGWHENDIAKVLGQNWLRWFQRII
Sequences:
>Translated_350_residues MILVDAHLDLAYNAINLGRDLTKTVELGRQRATEQTVEWIAEAGTLTTTLAEIGLHTPSIVCGTIFILPAEAQTTLDGVA YATPDEAHDQAWEQLNWYKQQCAAGFLHLIDNQPALQAIQARNQSVPGLVLLMEGADGLRTPDELIEWYAAGLRWLGPAW QATRYAGGTGAPGSLTKLGLELLELMQRLGVALDASHLAEESFWQALEHFQGPIAASHSNCRSLLVGASHQDRYLSDEMI KAIIERDGVIGIALYNRMLRADWDGSKNHVSLEHVVMQIEHICQLAGNTQHVALGSDLDGGFGVEMIPAEIDRWSDLLKI GQALAKRGWHENDIAKVLGQNWLRWFQRII >Mature_350_residues MILVDAHLDLAYNAINLGRDLTKTVELGRQRATEQTVEWIAEAGTLTTTLAEIGLHTPSIVCGTIFILPAEAQTTLDGVA YATPDEAHDQAWEQLNWYKQQCAAGFLHLIDNQPALQAIQARNQSVPGLVLLMEGADGLRTPDELIEWYAAGLRWLGPAW QATRYAGGTGAPGSLTKLGLELLELMQRLGVALDASHLAEESFWQALEHFQGPIAASHSNCRSLLVGASHQDRYLSDEMI KAIIERDGVIGIALYNRMLRADWDGSKNHVSLEHVVMQIEHICQLAGNTQHVALGSDLDGGFGVEMIPAEIDRWSDLLKI GQALAKRGWHENDIAKVLGQNWLRWFQRII
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M19 family [H]
Homologues:
Organism=Homo sapiens, GI189458885, Length=184, Percent_Identity=26.6304347826087, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI4758190, Length=184, Percent_Identity=26.6304347826087, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI11641269, Length=268, Percent_Identity=24.2537313432836, Blast_Score=69, Evalue=8e-12, Organism=Drosophila melanogaster, GI221475880, Length=213, Percent_Identity=28.169014084507, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI161083233, Length=213, Percent_Identity=26.7605633802817, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI281362638, Length=178, Percent_Identity=28.0898876404494, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI281362636, Length=178, Percent_Identity=28.0898876404494, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008257 [H]
Pfam domain/function: PF01244 Peptidase_M19 [H]
EC number: NA
Molecular weight: Translated: 38618; Mature: 38618
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS00148 ARGINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILVDAHLDLAYNAINLGRDLTKTVELGRQRATEQTVEWIAEAGTLTTTLAEIGLHTPSI CEEEEECHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHH VCGTIFILPAEAQTTLDGVAYATPDEAHDQAWEQLNWYKQQCAAGFLHLIDNQPALQAIQ HHHEEEEECCCCHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH ARNQSVPGLVLLMEGADGLRTPDELIEWYAAGLRWLGPAWQATRYAGGTGAPGSLTKLGL HHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHH ELLELMQRLGVALDASHLAEESFWQALEHFQGPIAASHSNCRSLLVGASHQDRYLSDEMI HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHH KAIIERDGVIGIALYNRMLRADWDGSKNHVSLEHVVMQIEHICQLAGNTQHVALGSDLDG HHHHHCCCEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCC GFGVEMIPAEIDRWSDLLKIGQALAKRGWHENDIAKVLGQNWLRWFQRII CCCCEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MILVDAHLDLAYNAINLGRDLTKTVELGRQRATEQTVEWIAEAGTLTTTLAEIGLHTPSI CEEEEECHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHH VCGTIFILPAEAQTTLDGVAYATPDEAHDQAWEQLNWYKQQCAAGFLHLIDNQPALQAIQ HHHEEEEECCCCHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH ARNQSVPGLVLLMEGADGLRTPDELIEWYAAGLRWLGPAWQATRYAGGTGAPGSLTKLGL HHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHH ELLELMQRLGVALDASHLAEESFWQALEHFQGPIAASHSNCRSLLVGASHQDRYLSDEMI HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHH KAIIERDGVIGIALYNRMLRADWDGSKNHVSLEHVVMQIEHICQLAGNTQHVALGSDLDG HHHHHCCCEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCC GFGVEMIPAEIDRWSDLLKIGQALAKRGWHENDIAKVLGQNWLRWFQRII CCCCEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1313537 [H]