Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901123

Identifier: 159901123

GI number: 159901123

Start: 5896686

End: 5897777

Strand: Direct

Name: 159901123

Synonym: Haur_4611

Alternate gene names: NA

Gene position: 5896686-5897777 (Clockwise)

Preceding gene: 159901122

Following gene: 159901124

Centisome position: 92.91

GC content: 47.89

Gene sequence:

>1092_bases
ATGCGCCAAAACCCAGCTCTGGGCATGATTCTTGCCGTCGTTGTTCTCATAGCCGCGCTTGCTGGCGGGTATGTTTATTT
AACCAATCAGCAAAAAAGCCAAACAAGTGGAGACCCCTCATTACTTGAGCCAACCAATATGCCGGTTCCGAATGTGCAAA
TTTTAGAAGCGGCGACCGATATCGAAGCCAACAAATTGATTACTGGTGCGGATCTTGAGCAATACTTCAACCCGCTTGAA
GTTCCTCCTAGCGATGTTACCCCCGACGATGTACTGTACACCGAATTTTATAGCGTGGTTCAAGGGAAGGTAACGACCAC
CGACATTCGTGGCGGTGAGCGGATTAAAAAATCAACCTTCCGCAACGCTGGGATTGCCGAAAAGCTGCCAATTCCGGTGG
CTGGCGAAGAATCGCTTAAAGCCTACAACATGTTTGTCAGCGATATTGGTGGGATTGTCGCCGAAGGTAATAACATTGAT
ATTCTCGGCAGCTATAGCCTTGAACAACCCTATTTACGCTTTACAGGGATTGACAAAGACGGGATAATTACCCTCGTTGA
TGAAAAATACCTTGATATTAGCACCCATGTATTAGCCCAAAATGTGCCCGTTTTGAAGGTTGTCGCGCCACCATTAATCT
CACCTGATGGCCAACAAACTGGTGCTGCCCCGCCTGCGGCTGAACCAACCATAGAGGTGGTTGTCGATGGCAATCCCGTT
GAACCTCAAGCAACTCCTGAGCCAATCTTTACTGAAGGCTCGCAATGGCAAATTGTGGTGGCCTTGACTGCCCAACAAGC
CGAGCTGTTAGAATATACAAAAGCTAAAACTGGTAGTAAACTAAATGTAGTCGTGCGGCGTGCTGATGATCAAGATGATC
GAATTGCCACAACTGGGGTAACAATGGATCTGTTGATGCGCTTATATGGCGTACCACAAGTCTATGCCCAACCCAACATG
ATTGTGAAACTGTTGGATGCTCCTGCACCACCACAGCCTCCACAACAGCCGGCAGTTGTTATTCCATTCCGATTACCAAA
CGCACCACAACAACAACCATTGCCAACAGCAGTGCCAACTCAAACGCCTTAA

Upstream 100 bases:

>100_bases
GACAGTTGATCAATCGTGTATAATAGCCGCAAACCTCACTATAAAACGGGGGCACGCTTGCCTCACGAGCTCCCAATATT
GTTTCGGAGGACGTATTTTT

Downstream 100 bases:

>100_bases
TACAACCAAGGAGAATTGCATGGCTGAGTCCGATAAAATTCGCGTACTAATTGTTGACGATATTGCAGATACTCGTGATA
ACCTCGAAAAATTATTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein CpaB

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MRQNPALGMILAVVVLIAALAGGYVYLTNQQKSQTSGDPSLLEPTNMPVPNVQILEAATDIEANKLITGADLEQYFNPLE
VPPSDVTPDDVLYTEFYSVVQGKVTTTDIRGGERIKKSTFRNAGIAEKLPIPVAGEESLKAYNMFVSDIGGIVAEGNNID
ILGSYSLEQPYLRFTGIDKDGIITLVDEKYLDISTHVLAQNVPVLKVVAPPLISPDGQQTGAAPPAAEPTIEVVVDGNPV
EPQATPEPIFTEGSQWQIVVALTAQQAELLEYTKAKTGSKLNVVVRRADDQDDRIATTGVTMDLLMRLYGVPQVYAQPNM
IVKLLDAPAPPQPPQQPAVVIPFRLPNAPQQQPLPTAVPTQTP

Sequences:

>Translated_363_residues
MRQNPALGMILAVVVLIAALAGGYVYLTNQQKSQTSGDPSLLEPTNMPVPNVQILEAATDIEANKLITGADLEQYFNPLE
VPPSDVTPDDVLYTEFYSVVQGKVTTTDIRGGERIKKSTFRNAGIAEKLPIPVAGEESLKAYNMFVSDIGGIVAEGNNID
ILGSYSLEQPYLRFTGIDKDGIITLVDEKYLDISTHVLAQNVPVLKVVAPPLISPDGQQTGAAPPAAEPTIEVVVDGNPV
EPQATPEPIFTEGSQWQIVVALTAQQAELLEYTKAKTGSKLNVVVRRADDQDDRIATTGVTMDLLMRLYGVPQVYAQPNM
IVKLLDAPAPPQPPQQPAVVIPFRLPNAPQQQPLPTAVPTQTP
>Mature_363_residues
MRQNPALGMILAVVVLIAALAGGYVYLTNQQKSQTSGDPSLLEPTNMPVPNVQILEAATDIEANKLITGADLEQYFNPLE
VPPSDVTPDDVLYTEFYSVVQGKVTTTDIRGGERIKKSTFRNAGIAEKLPIPVAGEESLKAYNMFVSDIGGIVAEGNNID
ILGSYSLEQPYLRFTGIDKDGIITLVDEKYLDISTHVLAQNVPVLKVVAPPLISPDGQQTGAAPPAAEPTIEVVVDGNPV
EPQATPEPIFTEGSQWQIVVALTAQQAELLEYTKAKTGSKLNVVVRRADDQDDRIATTGVTMDLLMRLYGVPQVYAQPNM
IVKLLDAPAPPQPPQQPAVVIPFRLPNAPQQQPLPTAVPTQTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39062; Mature: 39062

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQNPALGMILAVVVLIAALAGGYVYLTNQQKSQTSGDPSLLEPTNMPVPNVQILEAATD
CCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
IEANKLITGADLEQYFNPLEVPPSDVTPDDVLYTEFYSVVQGKVTTTDIRGGERIKKSTF
CCCCEEEECCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH
RNAGIAEKLPIPVAGEESLKAYNMFVSDIGGIVAEGNNIDILGSYSLEQPYLRFTGIDKD
HCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCEEECCCCEEEEECCCCCCCCEEEECCCCC
GIITLVDEKYLDISTHVLAQNVPVLKVVAPPLISPDGQQTGAAPPAAEPTIEVVVDGNPV
CEEEEECCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
EPQATPEPIFTEGSQWQIVVALTAQQAELLEYTKAKTGSKLNVVVRRADDQDDRIATTGV
CCCCCCCCCEECCCCEEEEEEEECCHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCC
TMDLLMRLYGVPQVYAQPNMIVKLLDAPAPPQPPQQPAVVIPFRLPNAPQQQPLPTAVPT
HHHHHHHHHCCCHHHCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC
QTP
CCC
>Mature Secondary Structure
MRQNPALGMILAVVVLIAALAGGYVYLTNQQKSQTSGDPSLLEPTNMPVPNVQILEAATD
CCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
IEANKLITGADLEQYFNPLEVPPSDVTPDDVLYTEFYSVVQGKVTTTDIRGGERIKKSTF
CCCCEEEECCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH
RNAGIAEKLPIPVAGEESLKAYNMFVSDIGGIVAEGNNIDILGSYSLEQPYLRFTGIDKD
HCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCEEECCCCEEEEECCCCCCCCEEEECCCCC
GIITLVDEKYLDISTHVLAQNVPVLKVVAPPLISPDGQQTGAAPPAAEPTIEVVVDGNPV
CEEEEECCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
EPQATPEPIFTEGSQWQIVVALTAQQAELLEYTKAKTGSKLNVVVRRADDQDDRIATTGV
CCCCCCCCCEECCCCEEEEEEEECCHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCC
TMDLLMRLYGVPQVYAQPNMIVKLLDAPAPPQPPQQPAVVIPFRLPNAPQQQPLPTAVPT
HHHHHHHHHCCCHHHCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC
QTP
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA