| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901092
Identifier: 159901092
GI number: 159901092
Start: 5859747
End: 5860220
Strand: Reverse
Name: 159901092
Synonym: Haur_4580
Alternate gene names: NA
Gene position: 5860220-5859747 (Counterclockwise)
Preceding gene: 159901096
Following gene: 159901091
Centisome position: 92.34
GC content: 50.42
Gene sequence:
>474_bases ATGGCCATGGATAATCTACAAGCACGTTTAGCGTATGCCGAGCGCATTGCCGTTTTTTACGAAAAAGCTGGGGGAATACC GCGTATGGCTGGTCGAATTATGGGCTGGTTGTTGATTTGCGATCCACCGCAGCAAAACGCGGCGGAGCTTGGGCAGGTGT TGAGCGCTAGCAAAGGTTCGATCAGCACGATGACGCGCTGGTTGCTGCAAATTGGCTTGATCAACAAAACTGCCGTGCCA GGCGACCGTCGCGATTATTTTGAGATTCGCAAAGGGACTTGGGCTGATTTGCTGGCCCAACAATTTCAAACGGTTGGCGC TTTTCGCGAATTAGCCACGCAAGGCCTGGATCTTTTGACCGATCCTGAGGGCGAAGAAGGCGCACGACTGCGTGAAATGC GTGATTTATATACATTTTTTGAGCGTGAATTACCGTTGCTCATTGAAAAATGGCGCAACGAACGAAAGGAATGA
Upstream 100 bases:
>100_bases CCTTTTCTTTTAGACCACGTATCAAATTCATAAAGTTCAGTCTTGACTGAACATGTTAAACGTGCTAAGCTTGTTCAAGC AGTACTGAACAGGATGAACT
Downstream 100 bases:
>100_bases CCATGACCACGGTTGTTCAAACCACAAATTTAACGAAAACCTATGGCAAAAATCGTGGAATTGATAGTTTAAATTTGCAC GTGCAACAAGGTGAAGTTTT
Product: regulatory protein MarR
Products: NA
Alternate protein names: MarR Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator TrmB; Regulatory Protein ArsR; Transcriptional Regulator MarR Family Protein; MarR Regulatory Protein; Marr Family Transcriptional Regulator
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MAMDNLQARLAYAERIAVFYEKAGGIPRMAGRIMGWLLICDPPQQNAAELGQVLSASKGSISTMTRWLLQIGLINKTAVP GDRRDYFEIRKGTWADLLAQQFQTVGAFRELATQGLDLLTDPEGEEGARLREMRDLYTFFERELPLLIEKWRNERKE
Sequences:
>Translated_157_residues MAMDNLQARLAYAERIAVFYEKAGGIPRMAGRIMGWLLICDPPQQNAAELGQVLSASKGSISTMTRWLLQIGLINKTAVP GDRRDYFEIRKGTWADLLAQQFQTVGAFRELATQGLDLLTDPEGEEGARLREMRDLYTFFERELPLLIEKWRNERKE >Mature_156_residues AMDNLQARLAYAERIAVFYEKAGGIPRMAGRIMGWLLICDPPQQNAAELGQVLSASKGSISTMTRWLLQIGLINKTAVPG DRRDYFEIRKGTWADLLAQQFQTVGAFRELATQGLDLLTDPEGEEGARLREMRDLYTFFERELPLLIEKWRNERKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17936; Mature: 17805
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMDNLQARLAYAERIAVFYEKAGGIPRMAGRIMGWLLICDPPQQNAAELGQVLSASKGS CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCC ISTMTRWLLQIGLINKTAVPGDRRDYFEIRKGTWADLLAQQFQTVGAFRELATQGLDLLT HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC DPEGEEGARLREMRDLYTFFERELPLLIEKWRNERKE CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure AMDNLQARLAYAERIAVFYEKAGGIPRMAGRIMGWLLICDPPQQNAAELGQVLSASKGS CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCC ISTMTRWLLQIGLINKTAVPGDRRDYFEIRKGTWADLLAQQFQTVGAFRELATQGLDLLT HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC DPEGEEGARLREMRDLYTFFERELPLLIEKWRNERKE CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA