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The map label for this gene is ynaD [H]

Identifier: 159901089

GI number: 159901089

Start: 5857390

End: 5857890

Strand: Reverse

Name: ynaD [H]

Synonym: Haur_4577

Alternate gene names: 159901089

Gene position: 5857890-5857390 (Counterclockwise)

Preceding gene: 159901090

Following gene: 159901088

Centisome position: 92.3

GC content: 49.3

Gene sequence:

>501_bases
ATGCAAACAATTCGCACCGCCCGTTTAATTATTCGGCGGTTTGGCTTAGCCGATGCCGCCTTCATTGTGCAACTAGTCAA
TCAACCCTCATGGCTACGATGGATTGGCAACCGCAATGTGCATACCCTTGATGATGCTGAAACCTACCTCAGCAGTGGCC
CGCTGAGCATGTACGAGCGCTATGGAGTGGGCTTGTGCGGCGTAGAATTAGCTGGCAAATTAATTGGCATGGCGGGCTTG
ATCAAACGTTCGCCCGAAGCCGAAATTGACCTTGGCTACGCCTTTTTGCCCGAATATTGGGGCCAAGGCTATGCCACCGA
AGTGGCTCAAGCCTTGCTCAATTATGCAATTCACATGCTCAAACTACCACGGATTATCGCCACAACCCAGCTTGAAAATC
AACAATCGATTAAAGTGCTCGAACGGATTGGCATGCAATTCGAGGGCATTATTCACGAAGGCGAAAAATCATTACGCTTG
TTTGGTTATGGCAATCGCTGA

Upstream 100 bases:

>100_bases
CTAGGGTGGATGAGCAGGCGTTTGGCATTTTCCGATGCCCACCCTGCTCCCACAGTTTAAAGCGCGAGAATGAACTGGTA
ACAAGACAAGAGAGAGCACC

Downstream 100 bases:

>100_bases
ATGAGGGTGTTGCAGAACGAAACCACGAAGCACACGAAGAGCACGAAGGGGGAAAACATTGCACCACATCACAACCCTCA
CCTAGATTTTCAGGTTCATC

Product: GCN5-like N-acetyltransferase

Products: Coenzyme A; H+; N8-Acetylspermidine [C]

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MQTIRTARLIIRRFGLADAAFIVQLVNQPSWLRWIGNRNVHTLDDAETYLSSGPLSMYERYGVGLCGVELAGKLIGMAGL
IKRSPEAEIDLGYAFLPEYWGQGYATEVAQALLNYAIHMLKLPRIIATTQLENQQSIKVLERIGMQFEGIIHEGEKSLRL
FGYGNR

Sequences:

>Translated_166_residues
MQTIRTARLIIRRFGLADAAFIVQLVNQPSWLRWIGNRNVHTLDDAETYLSSGPLSMYERYGVGLCGVELAGKLIGMAGL
IKRSPEAEIDLGYAFLPEYWGQGYATEVAQALLNYAIHMLKLPRIIATTQLENQQSIKVLERIGMQFEGIIHEGEKSLRL
FGYGNR
>Mature_166_residues
MQTIRTARLIIRRFGLADAAFIVQLVNQPSWLRWIGNRNVHTLDDAETYLSSGPLSMYERYGVGLCGVELAGKLIGMAGL
IKRSPEAEIDLGYAFLPEYWGQGYATEVAQALLNYAIHMLKLPRIIATTQLENQQSIKVLERIGMQFEGIIHEGEKSLRL
FGYGNR

Specific function: Regulates Polyamine Concentration By Their Degradation. Acts On Spermidine, Forming N(1)- And N(8)-Acetylspermidine. [C]

COG id: COG1670

COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: 2.3.1.57 [C]

Molecular weight: Translated: 18687; Mature: 18687

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTIRTARLIIRRFGLADAAFIVQLVNQPSWLRWIGNRNVHTLDDAETYLSSGPLSMYER
CCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHEEHHCCCCCCCCHHHHHHHHCCCHHHHHH
YGVGLCGVELAGKLIGMAGLIKRSPEAEIDLGYAFLPEYWGQGYATEVAQALLNYAIHML
HCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
KLPRIIATTQLENQQSIKVLERIGMQFEGIIHEGEKSLRLFGYGNR
HHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCC
>Mature Secondary Structure
MQTIRTARLIIRRFGLADAAFIVQLVNQPSWLRWIGNRNVHTLDDAETYLSSGPLSMYER
CCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHEEHHCCCCCCCCHHHHHHHHCCCHHHHHH
YGVGLCGVELAGKLIGMAGLIKRSPEAEIDLGYAFLPEYWGQGYATEVAQALLNYAIHML
HCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
KLPRIIATTQLENQQSIKVLERIGMQFEGIIHEGEKSLRLFGYGNR
HHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acetyl-CoA; Spermidine [C]

Specific reaction: Acetyl-CoA + Spermidine --> Coenzyme A + H+ + N8-Acetylspermidine [C]

General reaction: Acyl group transfer [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]