| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901069
Identifier: 159901069
GI number: 159901069
Start: 5833683
End: 5834591
Strand: Reverse
Name: 159901069
Synonym: Haur_4557
Alternate gene names: NA
Gene position: 5834591-5833683 (Counterclockwise)
Preceding gene: 159901070
Following gene: 159901065
Centisome position: 91.93
GC content: 44.88
Gene sequence:
>909_bases ATGTTTTCTAAACGAGGATGGATTGAGCAGATTGGCATGTTATGTTATTTGCTGCTTAGCAGTTGTGGTAACCAAGCAGC AGATGATGTTTGGCATAAAGCTGGACGTTATGCGGTACAGTTTGTTGGAATAGTTACAGCGAAAGCTCATGAGCCAATCC CAATCCAGCTAGCATTTATTGATGTTGGGACTCCACGCCGTACCAGCGAACCCCAATTCAATCAATTAACCATCGTGAGC GATCAGGGCGAATTAACCACCCAGTCAGTAACCCTTTCACCATCGCCAGCAACAGCCAATTCGCGGTTTTTCTCGGTTTT GGCAATGCTTGATGGGCTTAATCCAGGCAGTTATCACTTTAGTCAAATTCGCTATCTTGATGAACAGCAGCGTGAGCAAA CTATCACCGTAGGCGATTGGGAGCTTACAGTGCTTGATTTGCCAATCGCGACACTCAAACTTGGTAGTCATAGCGTGGTA ACGATGGGGCGGGCTGAACGGTTTGAAGCTGAGTTGATTAATCCAACTGATCAGGCGATCCAACTCTTTGCTAGTAGCAT CAAAGGCACTAAATATCCGATTTCAGCAACCCTACACATAGCCCAAACCAAGGCTGTGGCAAGCCAACCGATGCTTGGTG ATGCGCCACCCCAACCCCTATCAACTGTAGAAGTGACGATGATCGATCTCCAGCCAAAACAAAGCCAAAATATCATTTTT CAATTGCATGGGATCGAGCAATTGCCAACTGATTTTTTGGCAATTCAGCCTACAATTAACTATAAACAAGGCCAAACTGT GGCTCAAACATTTATTTTGCCATTACAAGTATTTTCGCCACCGTTTAACGACGATCTTGCCGTTAAAAAGTACCTTGATT TCCTGCCAGTGAGTGCTTTTCACGAATAA
Upstream 100 bases:
>100_bases AAGCCAAGATAGAACCTCTAGCAAAGAGCAAAATCTTCCTTCTATCCAAATATAATGCAATACATTACTATACCAATAAT TGGCAAAGATGGAGAGATTT
Downstream 100 bases:
>100_bases ACCAAGGCTCCTGATCAGTTGATCAGAAGCCTTGGTTTAGTTACAAAACAGGTGAGATGAAGGTGGGGAGGGCGGTTACG GGGTTGACCATCCCGCGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MFSKRGWIEQIGMLCYLLLSSCGNQAADDVWHKAGRYAVQFVGIVTAKAHEPIPIQLAFIDVGTPRRTSEPQFNQLTIVS DQGELTTQSVTLSPSPATANSRFFSVLAMLDGLNPGSYHFSQIRYLDEQQREQTITVGDWELTVLDLPIATLKLGSHSVV TMGRAERFEAELINPTDQAIQLFASSIKGTKYPISATLHIAQTKAVASQPMLGDAPPQPLSTVEVTMIDLQPKQSQNIIF QLHGIEQLPTDFLAIQPTINYKQGQTVAQTFILPLQVFSPPFNDDLAVKKYLDFLPVSAFHE
Sequences:
>Translated_302_residues MFSKRGWIEQIGMLCYLLLSSCGNQAADDVWHKAGRYAVQFVGIVTAKAHEPIPIQLAFIDVGTPRRTSEPQFNQLTIVS DQGELTTQSVTLSPSPATANSRFFSVLAMLDGLNPGSYHFSQIRYLDEQQREQTITVGDWELTVLDLPIATLKLGSHSVV TMGRAERFEAELINPTDQAIQLFASSIKGTKYPISATLHIAQTKAVASQPMLGDAPPQPLSTVEVTMIDLQPKQSQNIIF QLHGIEQLPTDFLAIQPTINYKQGQTVAQTFILPLQVFSPPFNDDLAVKKYLDFLPVSAFHE >Mature_302_residues MFSKRGWIEQIGMLCYLLLSSCGNQAADDVWHKAGRYAVQFVGIVTAKAHEPIPIQLAFIDVGTPRRTSEPQFNQLTIVS DQGELTTQSVTLSPSPATANSRFFSVLAMLDGLNPGSYHFSQIRYLDEQQREQTITVGDWELTVLDLPIATLKLGSHSVV TMGRAERFEAELINPTDQAIQLFASSIKGTKYPISATLHIAQTKAVASQPMLGDAPPQPLSTVEVTMIDLQPKQSQNIIF QLHGIEQLPTDFLAIQPTINYKQGQTVAQTFILPLQVFSPPFNDDLAVKKYLDFLPVSAFHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33401; Mature: 33401
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSKRGWIEQIGMLCYLLLSSCGNQAADDVWHKAGRYAVQFVGIVTAKAHEPIPIQLAFI CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEEEEEECCCCCCEEEEEEE DVGTPRRTSEPQFNQLTIVSDQGELTTQSVTLSPSPATANSRFFSVLAMLDGLNPGSYHF ECCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHH SQIRYLDEQQREQTITVGDWELTVLDLPIATLKLGSHSVVTMGRAERFEAELINPTDQAI HHHHHHHHHHHCCEEEECCEEEEEEECCEEEEECCCCEEEECCCCHHHHHCCCCCHHHHH QLFASSIKGTKYPISATLHIAQTKAVASQPMLGDAPPQPLSTVEVTMIDLQPKQSQNIIF HHHHHHCCCCCCCEEEEEEEEHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEE QLHGIEQLPTDFLAIQPTINYKQGQTVAQTFILPLQVFSPPFNDDLAVKKYLDFLPVSAF EEECCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHC HE CC >Mature Secondary Structure MFSKRGWIEQIGMLCYLLLSSCGNQAADDVWHKAGRYAVQFVGIVTAKAHEPIPIQLAFI CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEEEEEECCCCCCEEEEEEE DVGTPRRTSEPQFNQLTIVSDQGELTTQSVTLSPSPATANSRFFSVLAMLDGLNPGSYHF ECCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHH SQIRYLDEQQREQTITVGDWELTVLDLPIATLKLGSHSVVTMGRAERFEAELINPTDQAI HHHHHHHHHHHCCEEEECCEEEEEEECCEEEEECCCCEEEECCCCHHHHHCCCCCHHHHH QLFASSIKGTKYPISATLHIAQTKAVASQPMLGDAPPQPLSTVEVTMIDLQPKQSQNIIF HHHHHHCCCCCCCEEEEEEEEHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEE QLHGIEQLPTDFLAIQPTINYKQGQTVAQTFILPLQVFSPPFNDDLAVKKYLDFLPVSAF EEECCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHC HE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA