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The map label for this gene is tal

Identifier: 159900924

GI number: 159900924

Start: 5634257

End: 5634922

Strand: Direct

Name: tal

Synonym: Haur_4411

Alternate gene names: 159900924

Gene position: 5634257-5634922 (Clockwise)

Preceding gene: 159900923

Following gene: 159900925

Centisome position: 88.78

GC content: 49.25

Gene sequence:

>666_bases
ATGAAAATCTTTTTGGATACTGCTGATGTCGAAGAGATTCGCCAAGGGGTGGCGATGGGTGTGGTTGATGGTGTGACCAC
CAACCCTTCATTAGCAGCAAAAGCAGGCCGCAACTTCCGTGATGTGGTTTTAGAGATTGTTGAAATTTGTCCCGGCCCAG
TCAGTGCCGAAACCGTGGCATTGCAAGCCGATGAAATAGTCCGCGAAGGCCGAATTTTGGCCAAATGGGCACCAAACATT
GTGGTCAAAGTGCCGTTGATGGCTGAAGGCTTGAAAGCTGTTAAGCAATTGACCAGCGAAGGCATCAAAACTAATGTAAC
CTTGATTTTCTCAGCTTCCCAAGCCTTGTTGGCCGCCAAAGCTGGGGCCACCTTCGTTAGTCCGTTCTTGGGGCGGCTCG
ATGATATCGGCCAAGATGGCATGATCTTGATTCGCGATATTGTCCAGATTTTCAAAAACTACAATATCCAAACCGAAGTC
TTGGCGGCCTCAATTCGCCACCCAGTTCACGTTTTGCAATCGGCATTGGCTGGCTCGCATGTTGCTACCATGCCATTCAA
AGTGCTACAACAACTGGTCAAGCACCCGTTAACTGACAAAGGCATCGAAACCTTCTTAGTCGATTGGCAACAAGTGCCCG
ATGCCGCAACCGTGTTTGCTGAGTAA

Upstream 100 bases:

>100_bases
CGATCAGCATTGTTATGATGCAGCGCATTATGCTGCTATAATGCATGCTGGAAGTCTGAGAGGCATAGGTTCTAACCAGG
GCAATCAAAGGAGCAACTGG

Downstream 100 bases:

>100_bases
TCAATGAGTAATGCACCTTCATCAGGGCAATCACCTGCACCGCGTTTTCAACGCAGTAAACGCCCCCCGCTGCTTCGTCG
GAAGGAGCGGGCGGGTCGTA

Product: putative transaldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKIFLDTADVEEIRQGVAMGVVDGVTTNPSLAAKAGRNFRDVVLEIVEICPGPVSAETVALQADEIVREGRILAKWAPNI
VVKVPLMAEGLKAVKQLTSEGIKTNVTLIFSASQALLAAKAGATFVSPFLGRLDDIGQDGMILIRDIVQIFKNYNIQTEV
LAASIRHPVHVLQSALAGSHVATMPFKVLQQLVKHPLTDKGIETFLVDWQQVPDAATVFAE

Sequences:

>Translated_221_residues
MKIFLDTADVEEIRQGVAMGVVDGVTTNPSLAAKAGRNFRDVVLEIVEICPGPVSAETVALQADEIVREGRILAKWAPNI
VVKVPLMAEGLKAVKQLTSEGIKTNVTLIFSASQALLAAKAGATFVSPFLGRLDDIGQDGMILIRDIVQIFKNYNIQTEV
LAASIRHPVHVLQSALAGSHVATMPFKVLQQLVKHPLTDKGIETFLVDWQQVPDAATVFAE
>Mature_221_residues
MKIFLDTADVEEIRQGVAMGVVDGVTTNPSLAAKAGRNFRDVVLEIVEICPGPVSAETVALQADEIVREGRILAKWAPNI
VVKVPLMAEGLKAVKQLTSEGIKTNVTLIFSASQALLAAKAGATFVSPFLGRLDDIGQDGMILIRDIVQIFKNYNIQTEV
LAASIRHPVHVLQSALAGSHVATMPFKVLQQLVKHPLTDKGIETFLVDWQQVPDAATVFAE

Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway

COG id: COG0176

COG function: function code G; Transaldolase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transaldolase family. Type 3B subfamily

Homologues:

Organism=Homo sapiens, GI5803187, Length=174, Percent_Identity=30.4597701149425, Blast_Score=69, Evalue=3e-12,
Organism=Escherichia coli, GI87081788, Length=213, Percent_Identity=38.9671361502347, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1790382, Length=212, Percent_Identity=36.7924528301887, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1788807, Length=203, Percent_Identity=28.5714285714286, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1786189, Length=177, Percent_Identity=30.5084745762712, Blast_Score=75, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI25153750, Length=172, Percent_Identity=31.9767441860465, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6321480, Length=213, Percent_Identity=27.6995305164319, Blast_Score=75, Evalue=7e-15,
Organism=Drosophila melanogaster, GI45549185, Length=172, Percent_Identity=30.8139534883721, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TAL_HERA2 (A9AZ03)

Other databases:

- EMBL:   CP000875
- RefSeq:   YP_001547171.1
- ProteinModelPortal:   A9AZ03
- SMR:   A9AZ03
- GeneID:   5736262
- GenomeReviews:   CP000875_GR
- KEGG:   hau:Haur_4411
- HOGENOM:   HBG533000
- OMA:   IHKNIVI
- BioCyc:   HAUR316274:HAUR_4411-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00494
- InterPro:   IPR013785
- InterPro:   IPR001585
- InterPro:   IPR004731
- InterPro:   IPR022999
- Gene3D:   G3DSA:3.20.20.70
- PANTHER:   PTHR10683
- TIGRFAMs:   TIGR00875

Pfam domain/function: PF00923 Transaldolase

EC number: =2.2.1.2

Molecular weight: Translated: 23819; Mature: 23819

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: PS01054 TRANSALDOLASE_1; PS00958 TRANSALDOLASE_2

Important sites: ACT_SITE 83-83

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFLDTADVEEIRQGVAMGVVDGVTTNPSLAAKAGRNFRDVVLEIVEICPGPVSAETVA
CEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCHHHEE
LQADEIVREGRILAKWAPNIVVKVPLMAEGLKAVKQLTSEGIKTNVTLIFSASQALLAAK
HHHHHHHHCCCEEEEECCCEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHH
AGATFVSPFLGRLDDIGQDGMILIRDIVQIFKNYNIQTEVLAASIRHPVHVLQSALAGSH
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
VATMPFKVLQQLVKHPLTDKGIETFLVDWQQVPDAATVFAE
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHCCC
>Mature Secondary Structure
MKIFLDTADVEEIRQGVAMGVVDGVTTNPSLAAKAGRNFRDVVLEIVEICPGPVSAETVA
CEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCHHHEE
LQADEIVREGRILAKWAPNIVVKVPLMAEGLKAVKQLTSEGIKTNVTLIFSASQALLAAK
HHHHHHHHCCCEEEEECCCEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHH
AGATFVSPFLGRLDDIGQDGMILIRDIVQIFKNYNIQTEVLAASIRHPVHVLQSALAGSH
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
VATMPFKVLQQLVKHPLTDKGIETFLVDWQQVPDAATVFAE
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA