| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is pleC [H]
Identifier: 159900917
GI number: 159900917
Start: 5627289
End: 5628782
Strand: Reverse
Name: pleC [H]
Synonym: Haur_4404
Alternate gene names: 159900917
Gene position: 5628782-5627289 (Counterclockwise)
Preceding gene: 159900918
Following gene: 159900916
Centisome position: 88.69
GC content: 50.33
Gene sequence:
>1494_bases ATGGAAGAACACGATCAAATCGATGCCAGCCTTCAGGAAAATCTCTTATCGTTTCGGATCGACACCCTCACGATTTTAGT GTATTTGTGCTTGGGGTTTGGCGTGCTTTGGTTCGCTATGCTGCTAACCCAAGTTACCAGCAATGCAGGCGATTATACCC GTAGCGGCCCGCCGTGGGTGCTCTTTGCTGTTGGCACAGGCATGGCTTTTATGGGCCTGCGCTACAACAAAATTCGCTTG GCACGAAGTGCTTTCTTCTTTTCAATTGTCGGCACACCAACGATTAGCCTCTTTTTGCTGCCTGGCACAACTCAATTTAT GAGCTACTCGCTAGTGTTGGCGGTGATTATCGCGGGGATTTTGTATTCGCCTCGCGCCCCATTCACCGTTGTTGCACTTG TAGTGGTTATCTTCTTAATGGTTGGAATGGCCTCGGCAACCAATTTTACCAATCACTATGGCTCAATTACTCAATTTATC ACTACCTTTACGCCGCCTTCAGTCACGTTGCTGTTGGCAGCGCTTACCAGTTGGCTAGCAACCCGCGACTTGGTAGCAAC CGTCGAATGGGCCATGGAAAGCCATCGTTTAGCCGAACGCCGCGCCGAACGCCTGCGGGTCAGTGAAGCACGGGTTGCCC GTACCTTGCTTGAGCTTGAGGGCGCTTATGAAATGCAATCGCGCTTGAATAGCCAGTTACAAGTTCTTAACAAAGAGCTA GAGGTAGCACGGACTGCCGCCGATGAGGCTAATACATTAAAAACTCGCTTCTTAGCCAATATGTCGCACGAGCTGCGCAC GCCACTCAATGCGATCATCAACTTTACCCAGTTTTTGGGCAAACCCCGCTATGGCGATTTGACTGCCCGCCAAATTGAGC TGCAAGAACGGGTCTTAGTCAATAGCGAGCATCTGCTTGGCCTAATCAACGATATCTTAGATCTCTCGAAGATCGAAGCC GGACGCATGGAATTGCACCTTGAGCTGCTTGATTTGCAGCCAATTTTCAATGGGGTTATGGCAACAGCGGTTGGCTTGAC CAAGAGCAAAGGCTTAAACCTCGAATCAGATGTTGAGGAAGAAATTCCGCCTGTACGTGGCGATAAAGTGCGGGTACGCC AGATTTTGCTCAATTTGCTTTCCAACGCTGCCAAATTTACCGACAGCGGCGGCATTACGCTCCGCGCCTTCGAGAGCGAT GGGATGGTACAAATTTCAGTCATCGATACTGGCGCAGGTATTCCGGCTCACGAATTGCCCTTGGTTTTTGAAGAATTTCA CCAAGTTGAGCAAGCCGCCTCAGCCCAACGCCAACAAGGCACCGGCTTGGGCTTGCCAATTAGCCGCCACTTGGTAGAAT TACAGGGCGGCACCATGTGGGCCGAAAGTCAATTTGGCAGTGGCTCAAGTTTTAGTTTCACCCTGCCAATTGCTGAAAAT CTTACGCCCGAAGTCGTTATTTTCGACCCACAAACGAAACAGACAGCGCTATGA
Upstream 100 bases:
>100_bases AATCTGATGCACAATAATTGCAAAAACATGGTATGATTTTGAGCCATAATCAATCAATTGTTCAGCAAGCATATTAATTC AACTGAATGGTGGCCCCACC
Downstream 100 bases:
>100_bases TTGACCCAAACTTTGCCCATGTGCTGGTTGTTGAAGACCGTGATGATACCTTTTTCGTGGTGCAAGATCTGCTGATCACT GAAATTGGGGTTCGCTCGTG
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 497; Mature: 497
Protein sequence:
>497_residues MEEHDQIDASLQENLLSFRIDTLTILVYLCLGFGVLWFAMLLTQVTSNAGDYTRSGPPWVLFAVGTGMAFMGLRYNKIRL ARSAFFFSIVGTPTISLFLLPGTTQFMSYSLVLAVIIAGILYSPRAPFTVVALVVVIFLMVGMASATNFTNHYGSITQFI TTFTPPSVTLLLAALTSWLATRDLVATVEWAMESHRLAERRAERLRVSEARVARTLLELEGAYEMQSRLNSQLQVLNKEL EVARTAADEANTLKTRFLANMSHELRTPLNAIINFTQFLGKPRYGDLTARQIELQERVLVNSEHLLGLINDILDLSKIEA GRMELHLELLDLQPIFNGVMATAVGLTKSKGLNLESDVEEEIPPVRGDKVRVRQILLNLLSNAAKFTDSGGITLRAFESD GMVQISVIDTGAGIPAHELPLVFEEFHQVEQAASAQRQQGTGLGLPISRHLVELQGGTMWAESQFGSGSSFSFTLPIAEN LTPEVVIFDPQTKQTAL
Sequences:
>Translated_497_residues MEEHDQIDASLQENLLSFRIDTLTILVYLCLGFGVLWFAMLLTQVTSNAGDYTRSGPPWVLFAVGTGMAFMGLRYNKIRL ARSAFFFSIVGTPTISLFLLPGTTQFMSYSLVLAVIIAGILYSPRAPFTVVALVVVIFLMVGMASATNFTNHYGSITQFI TTFTPPSVTLLLAALTSWLATRDLVATVEWAMESHRLAERRAERLRVSEARVARTLLELEGAYEMQSRLNSQLQVLNKEL EVARTAADEANTLKTRFLANMSHELRTPLNAIINFTQFLGKPRYGDLTARQIELQERVLVNSEHLLGLINDILDLSKIEA GRMELHLELLDLQPIFNGVMATAVGLTKSKGLNLESDVEEEIPPVRGDKVRVRQILLNLLSNAAKFTDSGGITLRAFESD GMVQISVIDTGAGIPAHELPLVFEEFHQVEQAASAQRQQGTGLGLPISRHLVELQGGTMWAESQFGSGSSFSFTLPIAEN LTPEVVIFDPQTKQTAL >Mature_497_residues MEEHDQIDASLQENLLSFRIDTLTILVYLCLGFGVLWFAMLLTQVTSNAGDYTRSGPPWVLFAVGTGMAFMGLRYNKIRL ARSAFFFSIVGTPTISLFLLPGTTQFMSYSLVLAVIIAGILYSPRAPFTVVALVVVIFLMVGMASATNFTNHYGSITQFI TTFTPPSVTLLLAALTSWLATRDLVATVEWAMESHRLAERRAERLRVSEARVARTLLELEGAYEMQSRLNSQLQVLNKEL EVARTAADEANTLKTRFLANMSHELRTPLNAIINFTQFLGKPRYGDLTARQIELQERVLVNSEHLLGLINDILDLSKIEA GRMELHLELLDLQPIFNGVMATAVGLTKSKGLNLESDVEEEIPPVRGDKVRVRQILLNLLSNAAKFTDSGGITLRAFESD GMVQISVIDTGAGIPAHELPLVFEEFHQVEQAASAQRQQGTGLGLPISRHLVELQGGTMWAESQFGSGSSFSFTLPIAEN LTPEVVIFDPQTKQTAL
Specific function: Member of the two-component regulatory system involved in the regulation of polar organelle development. PleC functions as a membrane-associated protein kinase that transfers phosphate to the response regulator pleD, leading to its activation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1789149, Length=271, Percent_Identity=37.2693726937269, Blast_Score=162, Evalue=4e-41, Organism=Escherichia coli, GI145693157, Length=244, Percent_Identity=36.4754098360656, Blast_Score=138, Evalue=8e-34, Organism=Escherichia coli, GI87081816, Length=260, Percent_Identity=36.5384615384615, Blast_Score=134, Evalue=2e-32, Organism=Escherichia coli, GI48994928, Length=241, Percent_Identity=35.6846473029046, Blast_Score=132, Evalue=7e-32, Organism=Escherichia coli, GI1788713, Length=246, Percent_Identity=32.9268292682927, Blast_Score=125, Evalue=8e-30, Organism=Escherichia coli, GI87082128, Length=231, Percent_Identity=30.7359307359307, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1790436, Length=234, Percent_Identity=30.3418803418803, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1786600, Length=248, Percent_Identity=31.4516129032258, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1786912, Length=253, Percent_Identity=29.6442687747036, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1788393, Length=259, Percent_Identity=27.7992277992278, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1786783, Length=231, Percent_Identity=30.7359307359307, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI1788549, Length=301, Percent_Identity=25.2491694352159, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1790861, Length=229, Percent_Identity=28.82096069869, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1790346, Length=233, Percent_Identity=26.1802575107296, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1787894, Length=240, Percent_Identity=25.8333333333333, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 54821; Mature: 54821
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEHDQIDASLQENLLSFRIDTLTILVYLCLGFGVLWFAMLLTQVTSNAGDYTRSGPPWV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE LFAVGTGMAFMGLRYNKIRLARSAFFFSIVGTPTISLFLLPGTTQFMSYSLVLAVIIAGI EEEECCCHHHHCCCHHHHHHHHHHHHEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHH LYSPRAPFTVVALVVVIFLMVGMASATNFTNHYGSITQFITTFTPPSVTLLLAALTSWLA HCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH TRDLVATVEWAMESHRLAERRAERLRVSEARVARTLLELEGAYEMQSRLNSQLQVLNKEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH EVARTAADEANTLKTRFLANMSHELRTPLNAIINFTQFLGKPRYGDLTARQIELQERVLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC NSEHLLGLINDILDLSKIEAGRMELHLELLDLQPIFNGVMATAVGLTKSKGLNLESDVEE CCHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH EIPPVRGDKVRVRQILLNLLSNAAKFTDSGGITLRAFESDGMVQISVIDTGAGIPAHELP HCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEECCCCCCHHHHH LVFEEFHQVEQAASAQRQQGTGLGLPISRHLVELQGGTMWAESQFGSGSSFSFTLPIAEN HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEECCCEEEECCCCCCCCCEEEEECHHCC LTPEVVIFDPQTKQTAL CCCCEEEECCCCCCCCC >Mature Secondary Structure MEEHDQIDASLQENLLSFRIDTLTILVYLCLGFGVLWFAMLLTQVTSNAGDYTRSGPPWV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE LFAVGTGMAFMGLRYNKIRLARSAFFFSIVGTPTISLFLLPGTTQFMSYSLVLAVIIAGI EEEECCCHHHHCCCHHHHHHHHHHHHEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHH LYSPRAPFTVVALVVVIFLMVGMASATNFTNHYGSITQFITTFTPPSVTLLLAALTSWLA HCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH TRDLVATVEWAMESHRLAERRAERLRVSEARVARTLLELEGAYEMQSRLNSQLQVLNKEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH EVARTAADEANTLKTRFLANMSHELRTPLNAIINFTQFLGKPRYGDLTARQIELQERVLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC NSEHLLGLINDILDLSKIEAGRMELHLELLDLQPIFNGVMATAVGLTKSKGLNLESDVEE CCHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH EIPPVRGDKVRVRQILLNLLSNAAKFTDSGGITLRAFESDGMVQISVIDTGAGIPAHELP HCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEECCCCCCHHHHH LVFEEFHQVEQAASAQRQQGTGLGLPISRHLVELQGGTMWAESQFGSGSSFSFTLPIAEN HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEECCCEEEECCCCCCCCCEEEEECHHCC LTPEVVIFDPQTKQTAL CCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8421698; 11259647 [H]