| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is catD [H]
Identifier: 159900914
GI number: 159900914
Start: 5625276
End: 5626103
Strand: Direct
Name: catD [H]
Synonym: Haur_4401
Alternate gene names: 159900914
Gene position: 5625276-5626103 (Clockwise)
Preceding gene: 159900912
Following gene: 159900923
Centisome position: 88.63
GC content: 50.36
Gene sequence:
>828_bases ATGAGTCAAGCGCTTGAAACAGGCTACGTCGCTGTTGATGGTGGTGAATTGTATTATGAAGCGGTGGGCAGTGGCTTGCC GTTGGTGTTTATTCACGCTGGGGTGGCCGATTTGCGCATGTGGGATGCCCAAGTTGCCCATTTTTCGCCCAACTATCGCG TCATTCGCTATGATACCCGCGGCTTTGGGCGCTCCAAGACCGAAGCGGTGAGTTTCTCCAATCGCCAAGATCTTTTGGCT GTGCTTGATCATTGCAAGGTGGATCAGGCGGTGTTGATTGGCAACTCGCGTGGCGGCAGCATTGCAATTGATTCAGCCTT AAGTTTTCCCGAACGGGTTAACGGCTTGGTGGTGCTTGGCTCAGGCTTGGGTGGCTTTGGCTCGGAAGAAATTCCCCCCG AATTAGTTGAGCCAATCGGCAAGATGCAAGCAGCGCAAGAAGCCAAAGATTGGGCTTTATTGGCCGAACTAGAGGCGCGT TTTTGGACTGATGGCCCCAATCAACCAGCAGGGCGAGCTGATTCAGCAGTCTACGAAGCTGTGCGCTCGATGACCTACGA GAATTTTATTAATCAGCCTGTCGAAGCCCAAGCCCAACCCTTGGAGCCACCAGCGGTTGGTCGTTTAGCCGAAATTAAAG TGCCAATGTTGATTTTGATTGGCTTGCTTGATGAATCTGATTGTGTTGAAGCAGCCAAATATTTAGCTGAGCATGTTGTC AACACCCAATATGTGGCCTTCCCCGATGTGGCACATATGGTCAGCTTGGAAAAACCGCAAGAATTTAATCGCGTAATGGG CGAATTTATTGAACGTAGCGTATTGTAA
Upstream 100 bases:
>100_bases AACTAACGGGCATGGCTCAAATCTCGGTCTTTAGTCGCTCGATCACGCACAACTGTGCGTTTATACTAACAACAACAAAT GTTCATCAGGAGAATGCTGA
Downstream 100 bases:
>100_bases TTAATGAATTGGCCCAGCCCGCCCATTTAGTTTGGGTTGGGCCAAACTATCATCAAGCATCGCCATAATTCGTTGAATCT GCTGCCGTCGCTTGGTGCTC
Product: alpha/beta hydrolase fold-domain containing protein
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MSQALETGYVAVDGGELYYEAVGSGLPLVFIHAGVADLRMWDAQVAHFSPNYRVIRYDTRGFGRSKTEAVSFSNRQDLLA VLDHCKVDQAVLIGNSRGGSIAIDSALSFPERVNGLVVLGSGLGGFGSEEIPPELVEPIGKMQAAQEAKDWALLAELEAR FWTDGPNQPAGRADSAVYEAVRSMTYENFINQPVEAQAQPLEPPAVGRLAEIKVPMLILIGLLDESDCVEAAKYLAEHVV NTQYVAFPDVAHMVSLEKPQEFNRVMGEFIERSVL
Sequences:
>Translated_275_residues MSQALETGYVAVDGGELYYEAVGSGLPLVFIHAGVADLRMWDAQVAHFSPNYRVIRYDTRGFGRSKTEAVSFSNRQDLLA VLDHCKVDQAVLIGNSRGGSIAIDSALSFPERVNGLVVLGSGLGGFGSEEIPPELVEPIGKMQAAQEAKDWALLAELEAR FWTDGPNQPAGRADSAVYEAVRSMTYENFINQPVEAQAQPLEPPAVGRLAEIKVPMLILIGLLDESDCVEAAKYLAEHVV NTQYVAFPDVAHMVSLEKPQEFNRVMGEFIERSVL >Mature_274_residues SQALETGYVAVDGGELYYEAVGSGLPLVFIHAGVADLRMWDAQVAHFSPNYRVIRYDTRGFGRSKTEAVSFSNRQDLLAV LDHCKVDQAVLIGNSRGGSIAIDSALSFPERVNGLVVLGSGLGGFGSEEIPPELVEPIGKMQAAQEAKDWALLAELEARF WTDGPNQPAGRADSAVYEAVRSMTYENFINQPVEAQAQPLEPPAVGRLAEIKVPMLILIGLLDESDCVEAAKYLAEHVVN TQYVAFPDVAHMVSLEKPQEFNRVMGEFIERSVL
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081721, Length=279, Percent_Identity=27.2401433691756, Blast_Score=78, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 29968; Mature: 29837
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQALETGYVAVDGGELYYEAVGSGLPLVFIHAGVADLRMWDAQVAHFSPNYRVIRYDTR CCCCCCCCEEEEECCCEEHHHHCCCCCEEEEECCHHHHHHHHHHHHEECCCCEEEEEECC GFGRSKTEAVSFSNRQDLLAVLDHCKVDQAVLIGNSRGGSIAIDSALSFPERVNGLVVLG CCCCCCHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCEEEHHHHCCHHHCCCEEEEE SGLGGFGSEEIPPELVEPIGKMQAAQEAKDWALLAELEARFWTDGPNQPAGRADSAVYEA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH VRSMTYENFINQPVEAQAQPLEPPAVGRLAEIKVPMLILIGLLDESDCVEAAKYLAEHVV HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC NTQYVAFPDVAHMVSLEKPQEFNRVMGEFIERSVL CCCEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SQALETGYVAVDGGELYYEAVGSGLPLVFIHAGVADLRMWDAQVAHFSPNYRVIRYDTR CCCCCCCEEEEECCCEEHHHHCCCCCEEEEECCHHHHHHHHHHHHEECCCCEEEEEECC GFGRSKTEAVSFSNRQDLLAVLDHCKVDQAVLIGNSRGGSIAIDSALSFPERVNGLVVLG CCCCCCHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCEEEHHHHCCHHHCCCEEEEE SGLGGFGSEEIPPELVEPIGKMQAAQEAKDWALLAELEARFWTDGPNQPAGRADSAVYEA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH VRSMTYENFINQPVEAQAQPLEPPAVGRLAEIKVPMLILIGLLDESDCVEAAKYLAEHVV HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC NTQYVAFPDVAHMVSLEKPQEFNRVMGEFIERSVL CCCEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]