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The map label for this gene is ssb [H]

Identifier: 159900883

GI number: 159900883

Start: 5582451

End: 5582810

Strand: Direct

Name: ssb [H]

Synonym: Haur_4370

Alternate gene names: 159900883

Gene position: 5582451-5582810 (Clockwise)

Preceding gene: 159900882

Following gene: 159900884

Centisome position: 87.96

GC content: 52.5

Gene sequence:

>360_bases
ATGAACGTTAAAGGAACCGTAAATCGAGTTGAACTAATCGGCTGGCTGGGTGGCGAACCAACCCAACGCTTTTTACCATC
GGGAGTTGGGGTCTGTGATTTCAGCGTGGCAACCAAGCGCTTTGGCAGTAAAGACGAACAAGGCGAGCAAACCTACGACA
CCGAATGGACAACCATCGAAGCTTGGAATGGTTTAGGCGATATTTGCCAAGATCGTTTGCACAAAGGCAGCCGGGTGCGG
GTCGTTGGTAGCTTGCACACCCGCTCGTGGGAAGACAAAGAAAGCGGTCAGCGTCGCTCCAAAACCGTTGTCCGTGCCGA
TGAAGTGTTGTTCCTCGATGCCTATGGCAACGACGAATAG

Upstream 100 bases:

>100_bases
ATGGATAGTGAAACAATGACCAATGGCTAGCCGAAAAATTCGCCAACGTAGCATCTAGATATGGGCAACTGAGTAAGTAC
ATTAAACCGGAGGAACACCA

Downstream 100 bases:

>100_bases
CCCCTAAGCAAGCCAAAGCCCTCAGCAAAACTGCTGAGGGCTTTGATGTTTGGAGCCGCATATCGGACTTGAACCGATGA
CCTACCACTTACAAGGCGGT

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MNVKGTVNRVELIGWLGGEPTQRFLPSGVGVCDFSVATKRFGSKDEQGEQTYDTEWTTIEAWNGLGDICQDRLHKGSRVR
VVGSLHTRSWEDKESGQRRSKTVVRADEVLFLDAYGNDE

Sequences:

>Translated_119_residues
MNVKGTVNRVELIGWLGGEPTQRFLPSGVGVCDFSVATKRFGSKDEQGEQTYDTEWTTIEAWNGLGDICQDRLHKGSRVR
VVGSLHTRSWEDKESGQRRSKTVVRADEVLFLDAYGNDE
>Mature_119_residues
MNVKGTVNRVELIGWLGGEPTQRFLPSGVGVCDFSVATKRFGSKDEQGEQTYDTEWTTIEAWNGLGDICQDRLHKGSRVR
VVGSLHTRSWEDKESGQRRSKTVVRADEVLFLDAYGNDE

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=98, Percent_Identity=37.7551020408163, Blast_Score=66, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 13363; Mature: 13363

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVKGTVNRVELIGWLGGEPTQRFLPSGVGVCDFSVATKRFGSKDEQGEQTYDTEWTTIE
CCCCCCCCEEEEEEECCCCCHHHHCCCCCCEECHHHHHHHCCCCCCCCCCCCCCCCEEEE
AWNGLGDICQDRLHKGSRVRVVGSLHTRSWEDKESGQRRSKTVVRADEVLFLDAYGNDE
CCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHEEEEECEEEEEECCCCCC
>Mature Secondary Structure
MNVKGTVNRVELIGWLGGEPTQRFLPSGVGVCDFSVATKRFGSKDEQGEQTYDTEWTTIE
CCCCCCCCEEEEEEECCCCCHHHHCCCCCCEECHHHHHHHCCCCCCCCCCCCCCCCEEEE
AWNGLGDICQDRLHKGSRVRVVGSLHTRSWEDKESGQRRSKTVVRADEVLFLDAYGNDE
CCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHEEEEECEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9141679 [H]