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The map label for this gene is 159900880

Identifier: 159900880

GI number: 159900880

Start: 5578890

End: 5580641

Strand: Reverse

Name: 159900880

Synonym: Haur_4367

Alternate gene names: NA

Gene position: 5580641-5578890 (Counterclockwise)

Preceding gene: 159900881

Following gene: 159900873

Centisome position: 87.93

GC content: 50.23

Gene sequence:

>1752_bases
ATGCTTTTTCAACGTTGGTCACGTTATTTTAGCGTGGCAATTTGCCTAATCCTAATCGCTGCCTGTGCCAATCAAAATGC
GACAGCGATTCCTGCGACGGCAACAATCAACAACAATGCTGGCGAGCAAGCTCGCTCTGATAAAGATGGCGTGAATCAAA
GACCAACCAAAACGCCGCGACTCGCTGCCACGGCGACTCCAACCATCACAGGGCCGCATTTCGAGCAAGTTGGCAGCTTG
CGACTTAAGCCACCAACCAGCGGTCGCCATGCTGATCTCACGTTGTATAACGACTTGGTGTTGCTTGGTACGCAGCCTGG
CTCATGCCCCGCCGAAAATCAAATTACATTAATTGATGTGAGCGATCCGGCTAATCCAGAGTTGGCGGGCTATTCACCAA
GCGTCAAAAATGCCTCACTTGAAGATATGGATGTGGTGAGGATTGGCGAGCAAGATATTGCAGTTTTGGGGATTCAGCCC
TGCCGTGCAGCAACCAAACCTGGCATTCAAATTGTGGATATCACAGATCCAACTGAGCCGCTCGAATTGGCTCGGTTTGA
AACCAACCTTGGCGTACATGAACTCGATGTAACAATTACGGCTAGTGGACAAGCCTTGGCTTTGCTTGCTGCGCCCACCA
ATAACGCTTTTGGTACAACGCCCAAGCCCGAAGATCGTGGCGAATTGTGGATTGTTGATATTAGCGACCCTAGCCAACCA
ACCATGCTCAGCCGTTGGGGCATCGATCAAAAGCCCGATTGGCAAGCACTTGATTATGCAGATCGGACTCGTGGCAATTT
CCCAGGGATCTTTTTGCATAGCGTGCGGGCCAGCAGCAACAGCCAACGCGCCTATCTCTCGTACTGGGATGGCGGCGTGA
TTATCTTGGATATTCAAGACCCCAATCAACCAATCTACCTTGGCCAAACGCCCTATCCCGCGCTAGCCGAGGGCGATGCA
CACTCTGTCGTCGATTGGAATGATGGGCAAATGTTGGCCTTGAACAACGAAGATTTTAGCAACGATCAGGCAAAAATTAG
TCACCCAGCCTTGGCCGAGCCAGATTACGCCCACGAATTACCATTTGGCGGCAAACTTGATGCCCCGCTGAGTGCCAAGG
TTTTAGCGCTTGGGCAGGCTTGCGATGCTGAAGCTGAATATCCTGATTTCAAAGGTTTTTTTGTGTTGGCCGAGATGGCG
GGCTGTTCGATTGAGCAAAAGCTGCAAATTGCCCAAAACGGCGAGGCCGCAGCATTATTGATTTATGCTAATACACCATT
TGAGGAGCTGCAATTTGGCGATGATGTTGATTTGATCGATGATTTTGATCTGCCGATGTTTACCATTAGCAGCACAACCG
CCGCTGCCTTGCTCAGCCAACCTGAGGCTGAAGCAACGATCGAAAGCTATTTTGATGGTGGCGGCGCAATTCAATTCTTC
GATCTGAGCAATCCCAGCCAGCCAGTTGAAGTTGGGCGCTACAATACGCCAAATTCGATTAATGAGACGTTGCGATCCAA
CCCAACTGTGCATAATTCTGAGGTGCAAGGCCAATATTTGTATGCCTCGTGGTATCAAGATGGCCTGCGCATGCTCGATA
TCAGCGATCCCAGCCAGCCCAAATCAGTGGCAAGCTGGCCGCTGAACAATTCGCCAAAAGTGGCCTTGTGGGGCGTACAA
GTGCGCGATCAATTTGTCTATGTCAGCGATTTCAGTTATGGCTTGTATATTTTGGAGTTTAAGGCCGAGTAA

Upstream 100 bases:

>100_bases
CACCATTCGAGGAGCCAGTTAAATTCGTTCGGACACTCTATCAATTTATGCACCAACAACTGCCAACTAGCGCTTAGCAG
TTGTAATGAGAGGAGACAAA

Downstream 100 bases:

>100_bases
CTAAAATATGCTCGCATGGAAAAACCATGCGAGCATATTGATTAACGAGCAACGAACGCAGCCAAAACCGCTTGCAATTG
ATAAATATTGATCCGACTGT

Product: protease domain-containing protein

Products: NA

Alternate protein names: LVIVD Repeat Protein

Number of amino acids: Translated: 583; Mature: 583

Protein sequence:

>583_residues
MLFQRWSRYFSVAICLILIAACANQNATAIPATATINNNAGEQARSDKDGVNQRPTKTPRLAATATPTITGPHFEQVGSL
RLKPPTSGRHADLTLYNDLVLLGTQPGSCPAENQITLIDVSDPANPELAGYSPSVKNASLEDMDVVRIGEQDIAVLGIQP
CRAATKPGIQIVDITDPTEPLELARFETNLGVHELDVTITASGQALALLAAPTNNAFGTTPKPEDRGELWIVDISDPSQP
TMLSRWGIDQKPDWQALDYADRTRGNFPGIFLHSVRASSNSQRAYLSYWDGGVIILDIQDPNQPIYLGQTPYPALAEGDA
HSVVDWNDGQMLALNNEDFSNDQAKISHPALAEPDYAHELPFGGKLDAPLSAKVLALGQACDAEAEYPDFKGFFVLAEMA
GCSIEQKLQIAQNGEAAALLIYANTPFEELQFGDDVDLIDDFDLPMFTISSTTAAALLSQPEAEATIESYFDGGGAIQFF
DLSNPSQPVEVGRYNTPNSINETLRSNPTVHNSEVQGQYLYASWYQDGLRMLDISDPSQPKSVASWPLNNSPKVALWGVQ
VRDQFVYVSDFSYGLYILEFKAE

Sequences:

>Translated_583_residues
MLFQRWSRYFSVAICLILIAACANQNATAIPATATINNNAGEQARSDKDGVNQRPTKTPRLAATATPTITGPHFEQVGSL
RLKPPTSGRHADLTLYNDLVLLGTQPGSCPAENQITLIDVSDPANPELAGYSPSVKNASLEDMDVVRIGEQDIAVLGIQP
CRAATKPGIQIVDITDPTEPLELARFETNLGVHELDVTITASGQALALLAAPTNNAFGTTPKPEDRGELWIVDISDPSQP
TMLSRWGIDQKPDWQALDYADRTRGNFPGIFLHSVRASSNSQRAYLSYWDGGVIILDIQDPNQPIYLGQTPYPALAEGDA
HSVVDWNDGQMLALNNEDFSNDQAKISHPALAEPDYAHELPFGGKLDAPLSAKVLALGQACDAEAEYPDFKGFFVLAEMA
GCSIEQKLQIAQNGEAAALLIYANTPFEELQFGDDVDLIDDFDLPMFTISSTTAAALLSQPEAEATIESYFDGGGAIQFF
DLSNPSQPVEVGRYNTPNSINETLRSNPTVHNSEVQGQYLYASWYQDGLRMLDISDPSQPKSVASWPLNNSPKVALWGVQ
VRDQFVYVSDFSYGLYILEFKAE
>Mature_583_residues
MLFQRWSRYFSVAICLILIAACANQNATAIPATATINNNAGEQARSDKDGVNQRPTKTPRLAATATPTITGPHFEQVGSL
RLKPPTSGRHADLTLYNDLVLLGTQPGSCPAENQITLIDVSDPANPELAGYSPSVKNASLEDMDVVRIGEQDIAVLGIQP
CRAATKPGIQIVDITDPTEPLELARFETNLGVHELDVTITASGQALALLAAPTNNAFGTTPKPEDRGELWIVDISDPSQP
TMLSRWGIDQKPDWQALDYADRTRGNFPGIFLHSVRASSNSQRAYLSYWDGGVIILDIQDPNQPIYLGQTPYPALAEGDA
HSVVDWNDGQMLALNNEDFSNDQAKISHPALAEPDYAHELPFGGKLDAPLSAKVLALGQACDAEAEYPDFKGFFVLAEMA
GCSIEQKLQIAQNGEAAALLIYANTPFEELQFGDDVDLIDDFDLPMFTISSTTAAALLSQPEAEATIESYFDGGGAIQFF
DLSNPSQPVEVGRYNTPNSINETLRSNPTVHNSEVQGQYLYASWYQDGLRMLDISDPSQPKSVASWPLNNSPKVALWGVQ
VRDQFVYVSDFSYGLYILEFKAE

Specific function: Unknown

COG id: COG5276

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63446; Mature: 63446

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFQRWSRYFSVAICLILIAACANQNATAIPATATINNNAGEQARSDKDGVNQRPTKTPR
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHCCCCCCCCCCCCCCCC
LAATATPTITGPHFEQVGSLRLKPPTSGRHADLTLYNDLVLLGTQPGSCPAENQITLIDV
EEEECCCCCCCCCHHHHCCEEECCCCCCCEEEEEEECCEEEEECCCCCCCCCCCEEEEEC
SDPANPELAGYSPSVKNASLEDMDVVRIGEQDIAVLGIQPCRAATKPGIQIVDITDPTEP
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCEEEEECCCCCCC
LELARFETNLGVHELDVTITASGQALALLAAPTNNAFGTTPKPEDRGELWIVDISDPSQP
HHHHEECCCCCEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCC
TMLSRWGIDQKPDWQALDYADRTRGNFPGIFLHSVRASSNSQRAYLSYWDGGVIILDIQD
CCHHHCCCCCCCCCCCCCCHHHCCCCCCEEEEEEEECCCCCCEEEEEEECCCEEEEEEEC
PNQPIYLGQTPYPALAEGDAHSVVDWNDGQMLALNNEDFSNDQAKISHPALAEPDYAHEL
CCCCEEECCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCEECCCCCCCCCCHHCC
PFGGKLDAPLSAKVLALGQACDAEAEYPDFKGFFVLAEMAGCSIEQKLQIAQNGEAAALL
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEHHCCCHHHHHHEECCCCEEEEE
IYANTPFEELQFGDDVDLIDDFDLPMFTISSTTAAALLSQPEAEATIESYFDGGGAIQFF
EEECCCHHHHCCCCCCCEEECCCCCEEEECCHHHHHHHCCCCHHHHHHHHCCCCCEEEEE
DLSNPSQPVEVGRYNTPNSINETLRSNPTVHNSEVQGQYLYASWYQDGLRMLDISDPSQP
ECCCCCCCEECCCCCCCHHHHHHHHCCCCEECCCCCCEEEEEEECCCCCEEEECCCCCCC
KSVASWPLNNSPKVALWGVQVRDQFVYVSDFSYGLYILEFKAE
CHHCCCCCCCCCCEEEEEEEEEEEEEEEEECCCCEEEEEEECC
>Mature Secondary Structure
MLFQRWSRYFSVAICLILIAACANQNATAIPATATINNNAGEQARSDKDGVNQRPTKTPR
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHCCCCCCCCCCCCCCCC
LAATATPTITGPHFEQVGSLRLKPPTSGRHADLTLYNDLVLLGTQPGSCPAENQITLIDV
EEEECCCCCCCCCHHHHCCEEECCCCCCCEEEEEEECCEEEEECCCCCCCCCCCEEEEEC
SDPANPELAGYSPSVKNASLEDMDVVRIGEQDIAVLGIQPCRAATKPGIQIVDITDPTEP
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCEEEEECCCCCCC
LELARFETNLGVHELDVTITASGQALALLAAPTNNAFGTTPKPEDRGELWIVDISDPSQP
HHHHEECCCCCEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCC
TMLSRWGIDQKPDWQALDYADRTRGNFPGIFLHSVRASSNSQRAYLSYWDGGVIILDIQD
CCHHHCCCCCCCCCCCCCCHHHCCCCCCEEEEEEEECCCCCCEEEEEEECCCEEEEEEEC
PNQPIYLGQTPYPALAEGDAHSVVDWNDGQMLALNNEDFSNDQAKISHPALAEPDYAHEL
CCCCEEECCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCEECCCCCCCCCCHHCC
PFGGKLDAPLSAKVLALGQACDAEAEYPDFKGFFVLAEMAGCSIEQKLQIAQNGEAAALL
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEHHCCCHHHHHHEECCCCEEEEE
IYANTPFEELQFGDDVDLIDDFDLPMFTISSTTAAALLSQPEAEATIESYFDGGGAIQFF
EEECCCHHHHCCCCCCCEEECCCCCEEEECCHHHHHHHCCCCHHHHHHHHCCCCCEEEEE
DLSNPSQPVEVGRYNTPNSINETLRSNPTVHNSEVQGQYLYASWYQDGLRMLDISDPSQP
ECCCCCCCEECCCCCCCHHHHHHHHCCCCEECCCCCCEEEEEEECCCCCEEEECCCCCCC
KSVASWPLNNSPKVALWGVQVRDQFVYVSDFSYGLYILEFKAE
CHHCCCCCCCCCCEEEEEEEEEEEEEEEEECCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA