Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900822

Identifier: 159900822

GI number: 159900822

Start: 5502197

End: 5504134

Strand: Reverse

Name: 159900822

Synonym: Haur_4309

Alternate gene names: NA

Gene position: 5504134-5502197 (Counterclockwise)

Preceding gene: 159900823

Following gene: 159900821

Centisome position: 86.73

GC content: 49.74

Gene sequence:

>1938_bases
ATGGTGGCGGCGTTTTCGTGGACTAATTTTTTGCTTGCAGCCAATGACCTAACGCTGGCAGCAATTGTGGTCGTGGGGTT
TTCGTTATTTGCCTATATTGCGCTGCACAATTGGCGCAATGGGGTAGCTCGTTCGTTTTGTTTGTTGATTGTGGGGTTGA
TGATTGTGCTGGGGGGCGCAATTCTCCAACGTCAAGCGCAAACCGAAGCTACTCGTCATGTGCTTTGGCGCATTCAATGG
GCAGGTATTAGCCTTGTGCCTGCGGCCTACTACCATTTTGCCGAATCTCTGCTTCGTAGCACGGGTGATCCACGTATGTG
GACGCGAGTGCTCTTGCCTTTATTCTATACATTTAGTGTTGGCTTTTGGCTGGTCGCGCTGACGAGTAACATTTTGGTGA
TTGATGTGCCAAGTCAGCCGTATGTTGGCTTTGGCAAAGGGCCATTGTTTTGGTTCTTCATTAGCTATTTCGTCACCGTG
TGTTTGCTCGGGGTTTGGTGTATTCGCCAAGCCCATCGGCGCTCGATTACTCCGGCCAATCGGCGGCGCTTATGGTATTT
AAGTACTTCTTTTTTAGCCCCATTTCTGGGTGTATTTCCCTATTTGATTATCGCCGCCAATACTAAGGGCGTGCCATCCT
GGCTTTCGTTGATGCTACTAGGCGCAAGCACCACCGGCGTGGGAGTGATGATGACCCTCATGACCTATAGTGTGGCTTTC
CATGGGGTGATTGTGCCAGATCGTTTGGTTAAGTATAATTTCTTACGTTATGTATTATATGGGCCATTCGTTGGCGTAGC
CTTGATTATTTGTTTGCAATTGGTTGAGCCGATCAGTGCCGCCACCGGCTTGCCGCGTGCAACGATCACGATTTTTGGGG
TAATGTTGATGACGGTGATGATGCCAATTTTTATTGGGCGAATTCGGCCAACCGTCGATACCTTGATTTATCGCCAAGAT
AGTGATGAAGTGCGTTGGATGCGCCGCTTCGAGGAGCGAGCTTTCACCCGCCAAGATTTACGCCAATTGCTCGAAAATAC
CTTGGTGGCGGTTTGTGGCTCGTTGCGGGTTGAATCAGGCTTTGTGCTGGCTCCCAATGACGAGCATTTTACCGTTCAAG
CATCGTGTGGCCCGCGCCGCACCATCAAGCAATTTTTGAATGTTCATGATATCAACGAGCTATTGCAAAATCTGCCCCAC
TTGGCCTTCAGCAACGATCGCATTCCCGAAGTTGAGGATTTTAGCATTCGCGATGGCTTTTGTTTGTTGCCATTGTACAA
TAGCCAGCAGGAATTATTGGGCGCAATTGGGATTGGTTGTCGGCCAGAACAACTGACCATTCCCACTCGCCAGTTAATTG
CAACCTTGGCGCATCAGATGGAATTGGCGCTAACCCATATGCAATTGCAGCAAAACCTATTTAGCTCGTTGCGTGGGCTA
GCCCCCCAAAGCGCTTCGCTGTTACAATTAACCAGTGAAATTGAAACGCCAGTCACCGAAAAAAACGATGCGCTGGCTGA
TGTGGCCTTGCACCCTGAGTTTCCACAGTTGGTCAAGGATGCACTTTCACATTATTGGGGTGGCCCAAAACTGAGCGATA
GCCCATTGCTCGATTTGCGCACAGTGCGCCAATTGCTCGATACCCAAGGTGGCAGCCCAACGCGGGCTTTGCAAGGCGTG
TTACGCCAAGCGATCGAAAACATTCGGCCTGAAGATCAACTTGATCCAACGGCTCCCGAATGGATGATTTACAATATTTT
AGAATTACGCTTTCTCAAAGGCTTACGGATACGCGAGATTATAGATAAGCTCGCAATGAGCGAATCGGATTTTTATCGAA
AACAACGGGTGGCGGTGGAAGAAGTGGCCCGTCAGTTGGCGCTGATGGAAGACCAAGGCGATCGCCCTTCCGGCTCGGTT
GAGCGACAACGTCCCTAA

Upstream 100 bases:

>100_bases
CCCTTTAGAATCGCCTAGACGCGCCATGCTATAATTCAGGTGGCGGCACTGCTGCGGCCACATTCGCAGACTACATTCTC
AATCGCTAGGAACTTTAGGT

Downstream 100 bases:

>100_bases
GCGCGAGGCATCTGGAGATACCTGTATGGATAGCTACGAACGCCGTTCTCGTTTTGTTCACCGCTTTGCAACACCCCTGA
CCACGCTGAATGCGGGGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 645; Mature: 645

Protein sequence:

>645_residues
MVAAFSWTNFLLAANDLTLAAIVVVGFSLFAYIALHNWRNGVARSFCLLIVGLMIVLGGAILQRQAQTEATRHVLWRIQW
AGISLVPAAYYHFAESLLRSTGDPRMWTRVLLPLFYTFSVGFWLVALTSNILVIDVPSQPYVGFGKGPLFWFFISYFVTV
CLLGVWCIRQAHRRSITPANRRRLWYLSTSFLAPFLGVFPYLIIAANTKGVPSWLSLMLLGASTTGVGVMMTLMTYSVAF
HGVIVPDRLVKYNFLRYVLYGPFVGVALIICLQLVEPISAATGLPRATITIFGVMLMTVMMPIFIGRIRPTVDTLIYRQD
SDEVRWMRRFEERAFTRQDLRQLLENTLVAVCGSLRVESGFVLAPNDEHFTVQASCGPRRTIKQFLNVHDINELLQNLPH
LAFSNDRIPEVEDFSIRDGFCLLPLYNSQQELLGAIGIGCRPEQLTIPTRQLIATLAHQMELALTHMQLQQNLFSSLRGL
APQSASLLQLTSEIETPVTEKNDALADVALHPEFPQLVKDALSHYWGGPKLSDSPLLDLRTVRQLLDTQGGSPTRALQGV
LRQAIENIRPEDQLDPTAPEWMIYNILELRFLKGLRIREIIDKLAMSESDFYRKQRVAVEEVARQLALMEDQGDRPSGSV
ERQRP

Sequences:

>Translated_645_residues
MVAAFSWTNFLLAANDLTLAAIVVVGFSLFAYIALHNWRNGVARSFCLLIVGLMIVLGGAILQRQAQTEATRHVLWRIQW
AGISLVPAAYYHFAESLLRSTGDPRMWTRVLLPLFYTFSVGFWLVALTSNILVIDVPSQPYVGFGKGPLFWFFISYFVTV
CLLGVWCIRQAHRRSITPANRRRLWYLSTSFLAPFLGVFPYLIIAANTKGVPSWLSLMLLGASTTGVGVMMTLMTYSVAF
HGVIVPDRLVKYNFLRYVLYGPFVGVALIICLQLVEPISAATGLPRATITIFGVMLMTVMMPIFIGRIRPTVDTLIYRQD
SDEVRWMRRFEERAFTRQDLRQLLENTLVAVCGSLRVESGFVLAPNDEHFTVQASCGPRRTIKQFLNVHDINELLQNLPH
LAFSNDRIPEVEDFSIRDGFCLLPLYNSQQELLGAIGIGCRPEQLTIPTRQLIATLAHQMELALTHMQLQQNLFSSLRGL
APQSASLLQLTSEIETPVTEKNDALADVALHPEFPQLVKDALSHYWGGPKLSDSPLLDLRTVRQLLDTQGGSPTRALQGV
LRQAIENIRPEDQLDPTAPEWMIYNILELRFLKGLRIREIIDKLAMSESDFYRKQRVAVEEVARQLALMEDQGDRPSGSV
ERQRP
>Mature_645_residues
MVAAFSWTNFLLAANDLTLAAIVVVGFSLFAYIALHNWRNGVARSFCLLIVGLMIVLGGAILQRQAQTEATRHVLWRIQW
AGISLVPAAYYHFAESLLRSTGDPRMWTRVLLPLFYTFSVGFWLVALTSNILVIDVPSQPYVGFGKGPLFWFFISYFVTV
CLLGVWCIRQAHRRSITPANRRRLWYLSTSFLAPFLGVFPYLIIAANTKGVPSWLSLMLLGASTTGVGVMMTLMTYSVAF
HGVIVPDRLVKYNFLRYVLYGPFVGVALIICLQLVEPISAATGLPRATITIFGVMLMTVMMPIFIGRIRPTVDTLIYRQD
SDEVRWMRRFEERAFTRQDLRQLLENTLVAVCGSLRVESGFVLAPNDEHFTVQASCGPRRTIKQFLNVHDINELLQNLPH
LAFSNDRIPEVEDFSIRDGFCLLPLYNSQQELLGAIGIGCRPEQLTIPTRQLIATLAHQMELALTHMQLQQNLFSSLRGL
APQSASLLQLTSEIETPVTEKNDALADVALHPEFPQLVKDALSHYWGGPKLSDSPLLDLRTVRQLLDTQGGSPTRALQGV
LRQAIENIRPEDQLDPTAPEWMIYNILELRFLKGLRIREIIDKLAMSESDFYRKQRVAVEEVARQLALMEDQGDRPSGSV
ERQRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72724; Mature: 72724

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAAFSWTNFLLAANDLTLAAIVVVGFSLFAYIALHNWRNGVARSFCLLIVGLMIVLGGA
CCEEEEHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILQRQAQTEATRHVLWRIQWAGISLVPAAYYHFAESLLRSTGDPRMWTRVLLPLFYTFSV
HHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
GFWLVALTSNILVIDVPSQPYVGFGKGPLFWFFISYFVTVCLLGVWCIRQAHRRSITPAN
HHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RRRLWYLSTSFLAPFLGVFPYLIIAANTKGVPSWLSLMLLGASTTGVGVMMTLMTYSVAF
CCEEEEEEHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
HGVIVPDRLVKYNFLRYVLYGPFVGVALIICLQLVEPISAATGLPRATITIFGVMLMTVM
CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
MPIFIGRIRPTVDTLIYRQDSDEVRWMRRFEERAFTRQDLRQLLENTLVAVCGSLRVESG
HHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
FVLAPNDEHFTVQASCGPRRTIKQFLNVHDINELLQNLPHLAFSNDRIPEVEDFSIRDGF
EEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCE
CLLPLYNSQQELLGAIGIGCRPEQLTIPTRQLIATLAHQMELALTHMQLQQNLFSSLRGL
EEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
APQSASLLQLTSEIETPVTEKNDALADVALHPEFPQLVKDALSHYWGGPKLSDSPLLDLR
CCCCHHHHHHHHHHCCCCCCCCCCHHHEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHH
TVRQLLDTQGGSPTRALQGVLRQAIENIRPEDQLDPTAPEWMIYNILELRFLKGLRIREI
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHH
IDKLAMSESDFYRKQRVAVEEVARQLALMEDQGDRPSGSVERQRP
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVAAFSWTNFLLAANDLTLAAIVVVGFSLFAYIALHNWRNGVARSFCLLIVGLMIVLGGA
CCEEEEHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILQRQAQTEATRHVLWRIQWAGISLVPAAYYHFAESLLRSTGDPRMWTRVLLPLFYTFSV
HHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
GFWLVALTSNILVIDVPSQPYVGFGKGPLFWFFISYFVTVCLLGVWCIRQAHRRSITPAN
HHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RRRLWYLSTSFLAPFLGVFPYLIIAANTKGVPSWLSLMLLGASTTGVGVMMTLMTYSVAF
CCEEEEEEHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
HGVIVPDRLVKYNFLRYVLYGPFVGVALIICLQLVEPISAATGLPRATITIFGVMLMTVM
CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
MPIFIGRIRPTVDTLIYRQDSDEVRWMRRFEERAFTRQDLRQLLENTLVAVCGSLRVESG
HHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
FVLAPNDEHFTVQASCGPRRTIKQFLNVHDINELLQNLPHLAFSNDRIPEVEDFSIRDGF
EEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCE
CLLPLYNSQQELLGAIGIGCRPEQLTIPTRQLIATLAHQMELALTHMQLQQNLFSSLRGL
EEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
APQSASLLQLTSEIETPVTEKNDALADVALHPEFPQLVKDALSHYWGGPKLSDSPLLDLR
CCCCHHHHHHHHHHCCCCCCCCCCHHHEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHH
TVRQLLDTQGGSPTRALQGVLRQAIENIRPEDQLDPTAPEWMIYNILELRFLKGLRIREI
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHH
IDKLAMSESDFYRKQRVAVEEVARQLALMEDQGDRPSGSVERQRP
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA