Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900820

Identifier: 159900820

GI number: 159900820

Start: 5499686

End: 5499946

Strand: Reverse

Name: 159900820

Synonym: Haur_4307

Alternate gene names: NA

Gene position: 5499946-5499686 (Counterclockwise)

Preceding gene: 159900821

Following gene: 159900818

Centisome position: 86.66

GC content: 18.39

Gene sequence:

>261_bases
ATGGATTTTGAGAAACATTATATAGGAGAATTAATTGATGAAATTTCAAAAAATGATAATATAAAAATTAAAATTAATAA
TAAAGATATATTGAGGATTTTCAGGAATAGTATAATGCATTTTCATACAACAATTAGAAATAAAGGGGTTAATGTAGAAG
AATTTATTTATGATAAAAATGATTTTATTATTTTTACAGAAAATGTAAATATATTGATGTGTGAAATTAGAAGAGTGAAA
ACATATATATTAACTAAATAA

Upstream 100 bases:

>100_bases
TAATGATAAAATTAAGGTTTATATTTATTCGATAATTCTTTTATATGAGACATCTCTGAGGAAAATACTTAGAATAAATA
ATGTCAAAGACTTAAGAAAT

Downstream 100 bases:

>100_bases
TTTACCGAAAGCCTCGATTTTGAAATATAAAGCCGAGGCTTTCAACTTATCTGTCTTAGCGAAATTTAGGGGTGAGGTAA
GGCTAAATCTTCGCCTCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MDFEKHYIGELIDEISKNDNIKIKINNKDILRIFRNSIMHFHTTIRNKGVNVEEFIYDKNDFIIFTENVNILMCEIRRVK
TYILTK

Sequences:

>Translated_86_residues
MDFEKHYIGELIDEISKNDNIKIKINNKDILRIFRNSIMHFHTTIRNKGVNVEEFIYDKNDFIIFTENVNILMCEIRRVK
TYILTK
>Mature_86_residues
MDFEKHYIGELIDEISKNDNIKIKINNKDILRIFRNSIMHFHTTIRNKGVNVEEFIYDKNDFIIFTENVNILMCEIRRVK
TYILTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10422; Mature: 10422

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFEKHYIGELIDEISKNDNIKIKINNKDILRIFRNSIMHFHTTIRNKGVNVEEFIYDKN
CCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHEEECCC
DFIIFTENVNILMCEIRRVKTYILTK
CEEEEECCCCEEEEEEHHHHEEEECC
>Mature Secondary Structure
MDFEKHYIGELIDEISKNDNIKIKINNKDILRIFRNSIMHFHTTIRNKGVNVEEFIYDKN
CCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHEEECCC
DFIIFTENVNILMCEIRRVKTYILTK
CEEEEECCCCEEEEEEHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA