Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900797

Identifier: 159900797

GI number: 159900797

Start: 5470500

End: 5472068

Strand: Direct

Name: 159900797

Synonym: Haur_4284

Alternate gene names: NA

Gene position: 5470500-5472068 (Clockwise)

Preceding gene: 159900796

Following gene: 159900798

Centisome position: 86.2

GC content: 52.26

Gene sequence:

>1569_bases
ATGCAAACCTACCCTTGTAAGCTAACCTCTCCCGCACGCGAGCGAGGGGGAATTGATACCATCATCACAGGTGGAATGCC
CCTCTCCCGCCGCAGTGGGCGAGGGGTCGGGGGTGAGGGAAAGCCATTACACATTGAGGAATCTAGGCCCACTATGAAGC
GTCTTTTATCTCAAGCCGGGCCGGTGGTGATTGTGGCCCTGTGGCTGGCGCTGCTGCCAATTAGTTTGTTTCGGCTGTAT
GCCACCGATGAAGTGCAATACTTTGCCTATTTGCGCTCGGTCTATTTCGATGGCAATTTGGATTTCGCCAACGAATATGG
CTATTTTGCCGATCTCGGCATGCAAAAGGGCGATCCAGCAGTCTATAATGCGCTGCTCAAAGATCGTTCAAGCGATCCGC
CGCTCAACCCTATCACAGGCTTATATCGCAATGTTGCGCCTGTTGGCTCAGCAATCTTGTGGTCGCCGTGGTATGTGGTT
GCCGATGGTTTGGTTGGCGTGGGTATCTTTGGCGATGCGCCACGCGATGGATTTAGCCAGCCCTACATCATTGCCGTGTG
CTTAGCATCGGCCTGCTACACGCTGTTTGGTTTGCTGCTTTCCTATCGTTTGGCGCGGCGTTGGGTTGGTATGTGGGCAG
CCACATTAGCCACCTTGAGCATTTGGCTAGCCTCGCCATTGATTTGGTACACCTACATTCAAGTGCCTTGGTCGCATGGC
GCGGGCTTTGCGATGGTGGCCTTGTTTATCACGATCTGGCTTGGGCCTACCGATCAACCGCTGTTAGCCCAAGGTTCGCA
GCGTTCATGGGTGCGTTGGCTGGCCTTGGCCATCGTCGGCGGCTTGATGACACTGACGAGGGAACAGCTTGGCCTATTTT
TGCTCTTGCCAGCAGTTGAAGGTTTAGTCGCCTATGCTAGCTTAATTCGCCAAGGTCAATGGCTGCAAGTGCGCCAACTT
TTGGCTAAGCATGTATTTTTTGTGTTGATATTTGCCCTGAGCCTTGCTCCACAGTTGATCAGCTACAACATTTTGTATGG
CCAGCCCAAGCCGTCAGGCACGGTTTCGGGCAAATTGAATCTGATCAGCTATAAATTTTTGCATACCTTGTTCGACCCAC
GGCGGGGAGCGTTTATGTGGCATCCGCTGTTGCTGGTCGGCTTAGCTGGCTTGATTTGGCTCTGGCGCAAGGATCGGCTG
CTGACTGGATTGCTCAGTTTAGGCCTATTTGCCCAAATTTATCTGAATGGGGCGTTTGGCTCGACATGGCATTTGCAAGG
CTCGTTCGGCTTTCGGCGCTTGATCGAATGCACGCCAATTTTTATTATTGGTTTGGCATTATTGATCGAGCGAATTCGCT
GGCCCAAAGCGGCGATTGCCAGCCTAGCACTCGTATTCATTGTTTGGAATGGCGGCTTAATTTTTCAAGCGGCGACTGAC
CGCGAGATTCGTGGGCCAGGCTTGCGCTGGAATACCATGCTCGCTGATCAGCTTAAAGTGCCGCAATTGGTTTGGCAAAA
AGCCGATCAACTGCTGTTTAATCGCTGCGAAGTCGTTAAAAATTGCTAA

Upstream 100 bases:

>100_bases
AGCCCCCTCTCCCGCACGCGAGCGAGGGGGAATCCATCCCATCATGACAGATGGAACACCCCTCTCCCGCCGCAGTGGGC
GAGGGGTCGGGGGTGAGGGC

Downstream 100 bases:

>100_bases
CATCAGGTCGCGATGCGATGCAATCCGACGAGACTTGGCCTATGATACTATCCCAATACTAGATATTTATTCTCAAGTGG
GAGCCATACCAATGGAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 522; Mature: 522

Protein sequence:

>522_residues
MQTYPCKLTSPARERGGIDTIITGGMPLSRRSGRGVGGEGKPLHIEESRPTMKRLLSQAGPVVIVALWLALLPISLFRLY
ATDEVQYFAYLRSVYFDGNLDFANEYGYFADLGMQKGDPAVYNALLKDRSSDPPLNPITGLYRNVAPVGSAILWSPWYVV
ADGLVGVGIFGDAPRDGFSQPYIIAVCLASACYTLFGLLLSYRLARRWVGMWAATLATLSIWLASPLIWYTYIQVPWSHG
AGFAMVALFITIWLGPTDQPLLAQGSQRSWVRWLALAIVGGLMTLTREQLGLFLLLPAVEGLVAYASLIRQGQWLQVRQL
LAKHVFFVLIFALSLAPQLISYNILYGQPKPSGTVSGKLNLISYKFLHTLFDPRRGAFMWHPLLLVGLAGLIWLWRKDRL
LTGLLSLGLFAQIYLNGAFGSTWHLQGSFGFRRLIECTPIFIIGLALLIERIRWPKAAIASLALVFIVWNGGLIFQAATD
REIRGPGLRWNTMLADQLKVPQLVWQKADQLLFNRCEVVKNC

Sequences:

>Translated_522_residues
MQTYPCKLTSPARERGGIDTIITGGMPLSRRSGRGVGGEGKPLHIEESRPTMKRLLSQAGPVVIVALWLALLPISLFRLY
ATDEVQYFAYLRSVYFDGNLDFANEYGYFADLGMQKGDPAVYNALLKDRSSDPPLNPITGLYRNVAPVGSAILWSPWYVV
ADGLVGVGIFGDAPRDGFSQPYIIAVCLASACYTLFGLLLSYRLARRWVGMWAATLATLSIWLASPLIWYTYIQVPWSHG
AGFAMVALFITIWLGPTDQPLLAQGSQRSWVRWLALAIVGGLMTLTREQLGLFLLLPAVEGLVAYASLIRQGQWLQVRQL
LAKHVFFVLIFALSLAPQLISYNILYGQPKPSGTVSGKLNLISYKFLHTLFDPRRGAFMWHPLLLVGLAGLIWLWRKDRL
LTGLLSLGLFAQIYLNGAFGSTWHLQGSFGFRRLIECTPIFIIGLALLIERIRWPKAAIASLALVFIVWNGGLIFQAATD
REIRGPGLRWNTMLADQLKVPQLVWQKADQLLFNRCEVVKNC
>Mature_522_residues
MQTYPCKLTSPARERGGIDTIITGGMPLSRRSGRGVGGEGKPLHIEESRPTMKRLLSQAGPVVIVALWLALLPISLFRLY
ATDEVQYFAYLRSVYFDGNLDFANEYGYFADLGMQKGDPAVYNALLKDRSSDPPLNPITGLYRNVAPVGSAILWSPWYVV
ADGLVGVGIFGDAPRDGFSQPYIIAVCLASACYTLFGLLLSYRLARRWVGMWAATLATLSIWLASPLIWYTYIQVPWSHG
AGFAMVALFITIWLGPTDQPLLAQGSQRSWVRWLALAIVGGLMTLTREQLGLFLLLPAVEGLVAYASLIRQGQWLQVRQL
LAKHVFFVLIFALSLAPQLISYNILYGQPKPSGTVSGKLNLISYKFLHTLFDPRRGAFMWHPLLLVGLAGLIWLWRKDRL
LTGLLSLGLFAQIYLNGAFGSTWHLQGSFGFRRLIECTPIFIIGLALLIERIRWPKAAIASLALVFIVWNGGLIFQAATD
REIRGPGLRWNTMLADQLKVPQLVWQKADQLLFNRCEVVKNC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58150; Mature: 58150

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTYPCKLTSPARERGGIDTIITGGMPLSRRSGRGVGGEGKPLHIEESRPTMKRLLSQAG
CCCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCC
PVVIVALWLALLPISLFRLYATDEVQYFAYLRSVYFDGNLDFANEYGYFADLGMQKGDPA
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCHH
VYNALLKDRSSDPPLNPITGLYRNVAPVGSAILWSPWYVVADGLVGVGIFGDAPRDGFSQ
HHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHCCHHHHHCCCEEEEECCCCCCCCCCC
PYIIAVCLASACYTLFGLLLSYRLARRWVGMWAATLATLSIWLASPLIWYTYIQVPWSHG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCC
AGFAMVALFITIWLGPTDQPLLAQGSQRSWVRWLALAIVGGLMTLTREQLGLFLLLPAVE
CHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLVAYASLIRQGQWLQVRQLLAKHVFFVLIFALSLAPQLISYNILYGQPKPSGTVSGKLN
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCEEE
LISYKFLHTLFDPRRGAFMWHPLLLVGLAGLIWLWRKDRLLTGLLSLGLFAQIYLNGAFG
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
STWHLQGSFGFRRLIECTPIFIIGLALLIERIRWPKAAIASLALVFIVWNGGLIFQAATD
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCCEEEEECCC
REIRGPGLRWNTMLADQLKVPQLVWQKADQLLFNRCEVVKNC
CCCCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQTYPCKLTSPARERGGIDTIITGGMPLSRRSGRGVGGEGKPLHIEESRPTMKRLLSQAG
CCCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCC
PVVIVALWLALLPISLFRLYATDEVQYFAYLRSVYFDGNLDFANEYGYFADLGMQKGDPA
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCHH
VYNALLKDRSSDPPLNPITGLYRNVAPVGSAILWSPWYVVADGLVGVGIFGDAPRDGFSQ
HHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHCCHHHHHCCCEEEEECCCCCCCCCCC
PYIIAVCLASACYTLFGLLLSYRLARRWVGMWAATLATLSIWLASPLIWYTYIQVPWSHG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCC
AGFAMVALFITIWLGPTDQPLLAQGSQRSWVRWLALAIVGGLMTLTREQLGLFLLLPAVE
CHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLVAYASLIRQGQWLQVRQLLAKHVFFVLIFALSLAPQLISYNILYGQPKPSGTVSGKLN
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCEEE
LISYKFLHTLFDPRRGAFMWHPLLLVGLAGLIWLWRKDRLLTGLLSLGLFAQIYLNGAFG
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
STWHLQGSFGFRRLIECTPIFIIGLALLIERIRWPKAAIASLALVFIVWNGGLIFQAATD
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCCEEEEECCC
REIRGPGLRWNTMLADQLKVPQLVWQKADQLLFNRCEVVKNC
CCCCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA