| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900794
Identifier: 159900794
GI number: 159900794
Start: 5465736
End: 5468051
Strand: Direct
Name: 159900794
Synonym: Haur_4281
Alternate gene names: NA
Gene position: 5465736-5468051 (Clockwise)
Preceding gene: 159900793
Following gene: 159900795
Centisome position: 86.12
GC content: 50.0
Gene sequence:
>2316_bases ATGAAACCAACGACCTCGAAGAAATCCATAGGGCTGCTTTGTATCTTAGTGGCAAGCTTGTTTGCCTCAATGGTAAGCAA CAGAACTCCAGTTACCGCAGCTCCCAACGCGGTTGGTTGGGGCCAAGCTCAACTAGTCGCAGCAGGCGCACTCAAAAATT TGCACAGCGATGTTGTGATTGATGCTAATGGTAAAACCCACATTACCTGGATTCGGCTGGCAGCCAGCACGTCTGACCCA TCTGAGGTCATGTATACCAATAATGTGAGTGGCACATGGCTGAATCCGTATATTGTGAATGGGAACGCAGGCCACGGGGC TGATCCATTTGTTTCGATGGCAATCGAAGGCAATCGTGCGCATATTATCTTCATTAACTTTGAAGGGTTTGCCGTTCACC GTTATATCACGTTCTCGGCAAGTGGCATTACTCCTAGTGTTGCTACTGTGTTAAGCTCAACCAAAAGCTCAACACCGGAG ATTATTGCCGACAGAACCGGTAAAATTCATGCGTTCTGGGGCGACCGCCGCGCTAGCTCAGCGGCCCAAATTATTCACCG GATTTGGGCCAATGGGGCATGGGAAACCGGCACTGGTGGTCGGGTCGTGCGCAATGACGGGAGCAACCAAAAATATCCTC GCGCTACCGCAACTGCCGATGGCAATATTCACCTAACCTATCTTGGCGATGCAAAGTTCCCCTATCTCATTTTCAATGGG ACGACCTGGAATGTTTCCAACAACCTTGATAGTGGCAAAGTTAAAATTGCCTCACTAACCTCAAAAGGCAATACGGTTAT TGCTGTGTATTCGATGGCTCCTAGTACCCACATTGTTTACTACAAACAAGGTACAAACGGCACCTGGAGCAATCGGGTTC AATTAAGTAGTGGCACAAGCTACGACGAATTTCCGGCGGTAACCTACAACGATCAAACTGATCGGGTTTATGCTACGTGG TTAAGCGGCCCTGGCGATACAGCCCAAGCGTTAGTCGCCCAAGAAATTAACCCAGGCATTGCCTTCAATCCAATTCAAAC CATCGATGCAGCGATTGTCGGTCGGGCATGGCCGCAAATTGAAACACGAGGTGGGCTGGTAACGGCAGTTTGGCATCATC GTACCTCATCAAACCAACCGTTTAATGTCTATCGCATCGATGGGAATACGGGTGGTCAACCAGTTGCTACTGAAACCCCA ACCCTCTCACCAACTCCAACGCAACCACCTGTTGACTTTACCCTGACGCGGAGCAGCGCAAGCCCCAGCAATAACCCAAA TGTTGGCTTGACAATTACCAACATGATTGGCAACCCCGACCAAATGCGGGTCAGCACCACTGCATTCACGGCGCAATCAG CCTCACCAGCATGGGAAGGCTTGAACACTAGTAAAACCGTCAATACTGGGGCTGGGGTAACTTCATGTGTCACGGCAGTC TATGTGCAGTTGCGCAATAGTAGTAATGGTGGGGTTTCAAGCGTACAAGCGGTTAGCGCCTCAATCGATAGCGCCATCCA AAGCACGCCGCAAATCTACACCATGGAAACCGCGCCTAGTGCCCGCCCTGCCAGCTTGGAACAAGTGCAGTCGCAACCAT TTGCCCCTGATCGGGTTTCGGAAAAATATACCCGTAACATGACCTTTGCCTATACGATTGCCCAAGAAACTGGCGGTTGT TCTGGAATTACACGGCATAAAGCAGGGCCATTTGTTGTCAATGGATCGAGCTACCCTTACACGGGCTTCTCGGCCTTTGA TCGCTTTGTAACTGGCAACGATAGCTCAGGCACAGGCTTTGAAGAACAAACGGTCAATGCAACCGTGATTCTCACCGACA CACTCGGTAATCAAAGCACGACCACCAAACAATTTACCTACGACGATGATGCGCCAGTCTTGACTGCTGGCGGGAGCATT AGCTTACCAAACGGTGCAAACACCAATGTTTCAGTCATTCCCTTGGAGTTCACTGCGGTGGTAACTGATGATGGCTTTAT GAATAGTGCACCAGCCGATAAACGCTATTGGGGCGTGTGGGTCGTTGCCACCACAAGCAGCACCTTCCCTGCTCCACAAG ATTTCTTGCAATATGGCGATGTCATTGGCTTGGGCGATGGTACGAACCGTGTCGATTATGTACGTTTGGTCAATGCCTTA ACTGGCACGCAATCAGGCACACGCTTTGTACATATTCGGTTCCTCGACGGCGCAGGCAACTACACCGAAACAGGTTTGAC TTCGCAAGCAATTACCTTGCAGCCAAACTATACTGGCCTGCCCAACTATCTCCCATTGATCTACAAGTATCAATAA
Upstream 100 bases:
>100_bases CCAAGACGATACATTCAGCAGTGGGCAAACCGGGGTCTATGGATTTGCCGAAGGCATGCTGGCTTTTGATAATGTCATTG TTCAAGAATAAGGACGCACA
Downstream 100 bases:
>100_bases GTTTCACGCTACGAGGGACAGCCGTTGGCTGTCCCTCGTGGTTTTACCCCTCAAGATTTCATCAACTGCTTATATGGTTG CGATCATGCATGGCTTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 771; Mature: 771
Protein sequence:
>771_residues MKPTTSKKSIGLLCILVASLFASMVSNRTPVTAAPNAVGWGQAQLVAAGALKNLHSDVVIDANGKTHITWIRLAASTSDP SEVMYTNNVSGTWLNPYIVNGNAGHGADPFVSMAIEGNRAHIIFINFEGFAVHRYITFSASGITPSVATVLSSTKSSTPE IIADRTGKIHAFWGDRRASSAAQIIHRIWANGAWETGTGGRVVRNDGSNQKYPRATATADGNIHLTYLGDAKFPYLIFNG TTWNVSNNLDSGKVKIASLTSKGNTVIAVYSMAPSTHIVYYKQGTNGTWSNRVQLSSGTSYDEFPAVTYNDQTDRVYATW LSGPGDTAQALVAQEINPGIAFNPIQTIDAAIVGRAWPQIETRGGLVTAVWHHRTSSNQPFNVYRIDGNTGGQPVATETP TLSPTPTQPPVDFTLTRSSASPSNNPNVGLTITNMIGNPDQMRVSTTAFTAQSASPAWEGLNTSKTVNTGAGVTSCVTAV YVQLRNSSNGGVSSVQAVSASIDSAIQSTPQIYTMETAPSARPASLEQVQSQPFAPDRVSEKYTRNMTFAYTIAQETGGC SGITRHKAGPFVVNGSSYPYTGFSAFDRFVTGNDSSGTGFEEQTVNATVILTDTLGNQSTTTKQFTYDDDAPVLTAGGSI SLPNGANTNVSVIPLEFTAVVTDDGFMNSAPADKRYWGVWVVATTSSTFPAPQDFLQYGDVIGLGDGTNRVDYVRLVNAL TGTQSGTRFVHIRFLDGAGNYTETGLTSQAITLQPNYTGLPNYLPLIYKYQ
Sequences:
>Translated_771_residues MKPTTSKKSIGLLCILVASLFASMVSNRTPVTAAPNAVGWGQAQLVAAGALKNLHSDVVIDANGKTHITWIRLAASTSDP SEVMYTNNVSGTWLNPYIVNGNAGHGADPFVSMAIEGNRAHIIFINFEGFAVHRYITFSASGITPSVATVLSSTKSSTPE IIADRTGKIHAFWGDRRASSAAQIIHRIWANGAWETGTGGRVVRNDGSNQKYPRATATADGNIHLTYLGDAKFPYLIFNG TTWNVSNNLDSGKVKIASLTSKGNTVIAVYSMAPSTHIVYYKQGTNGTWSNRVQLSSGTSYDEFPAVTYNDQTDRVYATW LSGPGDTAQALVAQEINPGIAFNPIQTIDAAIVGRAWPQIETRGGLVTAVWHHRTSSNQPFNVYRIDGNTGGQPVATETP TLSPTPTQPPVDFTLTRSSASPSNNPNVGLTITNMIGNPDQMRVSTTAFTAQSASPAWEGLNTSKTVNTGAGVTSCVTAV YVQLRNSSNGGVSSVQAVSASIDSAIQSTPQIYTMETAPSARPASLEQVQSQPFAPDRVSEKYTRNMTFAYTIAQETGGC SGITRHKAGPFVVNGSSYPYTGFSAFDRFVTGNDSSGTGFEEQTVNATVILTDTLGNQSTTTKQFTYDDDAPVLTAGGSI SLPNGANTNVSVIPLEFTAVVTDDGFMNSAPADKRYWGVWVVATTSSTFPAPQDFLQYGDVIGLGDGTNRVDYVRLVNAL TGTQSGTRFVHIRFLDGAGNYTETGLTSQAITLQPNYTGLPNYLPLIYKYQ >Mature_771_residues MKPTTSKKSIGLLCILVASLFASMVSNRTPVTAAPNAVGWGQAQLVAAGALKNLHSDVVIDANGKTHITWIRLAASTSDP SEVMYTNNVSGTWLNPYIVNGNAGHGADPFVSMAIEGNRAHIIFINFEGFAVHRYITFSASGITPSVATVLSSTKSSTPE IIADRTGKIHAFWGDRRASSAAQIIHRIWANGAWETGTGGRVVRNDGSNQKYPRATATADGNIHLTYLGDAKFPYLIFNG TTWNVSNNLDSGKVKIASLTSKGNTVIAVYSMAPSTHIVYYKQGTNGTWSNRVQLSSGTSYDEFPAVTYNDQTDRVYATW LSGPGDTAQALVAQEINPGIAFNPIQTIDAAIVGRAWPQIETRGGLVTAVWHHRTSSNQPFNVYRIDGNTGGQPVATETP TLSPTPTQPPVDFTLTRSSASPSNNPNVGLTITNMIGNPDQMRVSTTAFTAQSASPAWEGLNTSKTVNTGAGVTSCVTAV YVQLRNSSNGGVSSVQAVSASIDSAIQSTPQIYTMETAPSARPASLEQVQSQPFAPDRVSEKYTRNMTFAYTIAQETGGC SGITRHKAGPFVVNGSSYPYTGFSAFDRFVTGNDSSGTGFEEQTVNATVILTDTLGNQSTTTKQFTYDDDAPVLTAGGSI SLPNGANTNVSVIPLEFTAVVTDDGFMNSAPADKRYWGVWVVATTSSTFPAPQDFLQYGDVIGLGDGTNRVDYVRLVNAL TGTQSGTRFVHIRFLDGAGNYTETGLTSQAITLQPNYTGLPNYLPLIYKYQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82174; Mature: 82174
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPTTSKKSIGLLCILVASLFASMVSNRTPVTAAPNAVGWGQAQLVAAGALKNLHSDVVI CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEHHHHHCCCCCEEE DANGKTHITWIRLAASTSDPSEVMYTNNVSGTWLNPYIVNGNAGHGADPFVSMAIEGNRA ECCCCEEEEEEEEEECCCCCCCEEEECCCCCEEECCEEEECCCCCCCCCEEEEEEECCCE HIIFINFEGFAVHRYITFSASGITPSVATVLSSTKSSTPEIIADRTGKIHAFWGDRRASS EEEEEEECCEEEEEEEEEEECCCCHHHHHHHHHCCCCCCCEEECCCCEEEEEECCCCHHH AAQIIHRIWANGAWETGTGGRVVRNDGSNQKYPRATATADGNIHLTYLGDAKFPYLIFNG HHHHHHHHHCCCCEECCCCCEEEECCCCCCCCCCEEEECCCCEEEEEECCCCCCEEEECC TTWNVSNNLDSGKVKIASLTSKGNTVIAVYSMAPSTHIVYYKQGTNGTWSNRVQLSSGTS EEEEECCCCCCCEEEEEEEECCCCEEEEEEEECCCEEEEEEEECCCCCCCCEEEECCCCC YDEFPAVTYNDQTDRVYATWLSGPGDTAQALVAQEINPGIAFNPIQTIDAAIVGRAWPQI CCCCCCEEECCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCCCCE ETRGGLVTAVWHHRTSSNQPFNVYRIDGNTGGQPVATETPTLSPTPTQPPVDFTLTRSSA ECCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC SPSNNPNVGLTITNMIGNPDQMRVSTTAFTAQSASPAWEGLNTSKTVNTGAGVTSCVTAV CCCCCCEEEEEEEECCCCCCCEEEEEEEEEECCCCCHHCCCCCCCEECCCCCHHHHHHEE YVQLRNSSNGGVSSVQAVSASIDSAIQSTPQIYTMETAPSARPASLEQVQSQPFAPDRVS EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCCCCCHHHH EKYTRNMTFAYTIAQETGGCSGITRHKAGPFVVNGSSYPYTGFSAFDRFVTGNDSSGTGF HHHHCCEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHEECCCCCCCCCC EEQTVNATVILTDTLGNQSTTTKQFTYDDDAPVLTAGGSISLPNGANTNVSVIPLEFTAV CCCCCEEEEEEEECCCCCCCCEEEEEECCCCCEEEECCEEECCCCCCCCEEEEEEEEEEE VTDDGFMNSAPADKRYWGVWVVATTSSTFPAPQDFLQYGDVIGLGDGTNRVDYVRLVNAL EECCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHCCEEEECCCCCCHHHHHHHHHH TGTQSGTRFVHIRFLDGAGNYTETGLTSQAITLQPNYTGLPNYLPLIYKYQ HCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEC >Mature Secondary Structure MKPTTSKKSIGLLCILVASLFASMVSNRTPVTAAPNAVGWGQAQLVAAGALKNLHSDVVI CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEHHHHHCCCCCEEE DANGKTHITWIRLAASTSDPSEVMYTNNVSGTWLNPYIVNGNAGHGADPFVSMAIEGNRA ECCCCEEEEEEEEEECCCCCCCEEEECCCCCEEECCEEEECCCCCCCCCEEEEEEECCCE HIIFINFEGFAVHRYITFSASGITPSVATVLSSTKSSTPEIIADRTGKIHAFWGDRRASS EEEEEEECCEEEEEEEEEEECCCCHHHHHHHHHCCCCCCCEEECCCCEEEEEECCCCHHH AAQIIHRIWANGAWETGTGGRVVRNDGSNQKYPRATATADGNIHLTYLGDAKFPYLIFNG HHHHHHHHHCCCCEECCCCCEEEECCCCCCCCCCEEEECCCCEEEEEECCCCCCEEEECC TTWNVSNNLDSGKVKIASLTSKGNTVIAVYSMAPSTHIVYYKQGTNGTWSNRVQLSSGTS EEEEECCCCCCCEEEEEEEECCCCEEEEEEEECCCEEEEEEEECCCCCCCCEEEECCCCC YDEFPAVTYNDQTDRVYATWLSGPGDTAQALVAQEINPGIAFNPIQTIDAAIVGRAWPQI CCCCCCEEECCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCCCCE ETRGGLVTAVWHHRTSSNQPFNVYRIDGNTGGQPVATETPTLSPTPTQPPVDFTLTRSSA ECCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC SPSNNPNVGLTITNMIGNPDQMRVSTTAFTAQSASPAWEGLNTSKTVNTGAGVTSCVTAV CCCCCCEEEEEEEECCCCCCCEEEEEEEEEECCCCCHHCCCCCCCEECCCCCHHHHHHEE YVQLRNSSNGGVSSVQAVSASIDSAIQSTPQIYTMETAPSARPASLEQVQSQPFAPDRVS EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCCCCCHHHH EKYTRNMTFAYTIAQETGGCSGITRHKAGPFVVNGSSYPYTGFSAFDRFVTGNDSSGTGF HHHHCCEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHEECCCCCCCCCC EEQTVNATVILTDTLGNQSTTTKQFTYDDDAPVLTAGGSISLPNGANTNVSVIPLEFTAV CCCCCEEEEEEEECCCCCCCCEEEEEECCCCCEEEECCEEECCCCCCCCEEEEEEEEEEE VTDDGFMNSAPADKRYWGVWVVATTSSTFPAPQDFLQYGDVIGLGDGTNRVDYVRLVNAL EECCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHCCEEEECCCCCCHHHHHHHHHH TGTQSGTRFVHIRFLDGAGNYTETGLTSQAITLQPNYTGLPNYLPLIYKYQ HCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA